EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020017235 (Gene tree)
Gene ID: -
Gene Symbol: sf3a2
Alias: -
Full Name: splicing factor 3a%2C subunit 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 4169 bases
Position: chr17:19741147-19745315
Accession: ZDB-GENE-040426-897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020016209	zf-met	PF12874.7	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020024441	-	3123	-	ENSORLP00020016209	290 (aa)	-	-

Gene Model

Click here to download ENSORLG00020017235's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020017235's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020017235	sf3a2	74	94.444	ENSG00000104897	SF3A2	100	94.815	Homo_sapiens
ENSORLG00020017235	sf3a2	82	92.887	ENSAPOG00000003916	sf3a2	99	89.456	Acanthochromis_polyacanthus
ENSORLG00020017235	sf3a2	74	94.444	ENSAMEG00000005469	SF3A2	57	85.714	Ailuropoda_melanoleuca
ENSORLG00020017235	sf3a2	82	94.142	ENSACIG00000018153	sf3a2	90	91.353	Amphilophus_citrinellus
ENSORLG00020017235	sf3a2	82	93.305	ENSAOCG00000015960	sf3a2	91	90.672	Amphiprion_ocellaris
ENSORLG00020017235	sf3a2	82	93.305	ENSAPEG00000012336	sf3a2	91	90.672	Amphiprion_percula
ENSORLG00020017235	sf3a2	82	93.305	ENSATEG00000015449	sf3a2	91	90.672	Anabas_testudineus
ENSORLG00020017235	sf3a2	64	94.054	ENSANAG00000034031	-	89	94.054	Aotus_nancymaae
ENSORLG00020017235	sf3a2	88	90.272	ENSACLG00000002356	sf3a2	99	89.726	Astatotilapia_calliptera
ENSORLG00020017235	sf3a2	82	92.469	ENSAMXG00000032428	sf3a2	88	86.891	Astyanax_mexicanus
ENSORLG00020017235	sf3a2	74	94.444	ENSBTAG00000025452	SF3A2	56	85.338	Bos_taurus
ENSORLG00020017235	sf3a2	76	79.545	WBGene00008683	repo-1	99	79.545	Caenorhabditis_elegans
ENSORLG00020017235	sf3a2	74	94.444	ENSCJAG00000013206	-	57	85.338	Callithrix_jacchus
ENSORLG00020017235	sf3a2	74	94.444	ENSCAFG00000019414	SF3A2	56	85.338	Canis_familiaris
ENSORLG00020017235	sf3a2	74	94.444	ENSCAFG00020018153	SF3A2	56	85.338	Canis_lupus_dingo
ENSORLG00020017235	sf3a2	74	94.444	ENSCHIG00000018323	SF3A2	56	85.338	Capra_hircus
ENSORLG00020017235	sf3a2	63	95.055	ENSCAPG00000003402	-	90	95.055	Cavia_aperea
ENSORLG00020017235	sf3a2	74	94.444	ENSCPOG00000032868	SF3A2	59	85.338	Cavia_porcellus
ENSORLG00020017235	sf3a2	74	94.444	ENSCCAG00000009812	SF3A2	87	94.595	Cebus_capucinus
ENSORLG00020017235	sf3a2	74	94.444	ENSCATG00000038453	SF3A2	57	85.338	Cercocebus_atys
ENSORLG00020017235	sf3a2	74	94.444	ENSCLAG00000008987	SF3A2	59	85.338	Chinchilla_lanigera
ENSORLG00020017235	sf3a2	74	94.444	ENSCSAG00000011717	SF3A2	56	85.338	Chlorocebus_sabaeus
ENSORLG00020017235	sf3a2	74	94.444	ENSCPBG00000018569	SF3A2	85	85.556	Chrysemys_picta_bellii
ENSORLG00020017235	sf3a2	84	78.776	ENSCING00000003319	zf(matrin)-2	71	77.912	Ciona_intestinalis
ENSORLG00020017235	sf3a2	74	85.581	ENSCSAVG00000007862	-	63	79.832	Ciona_savignyi
ENSORLG00020017235	sf3a2	74	94.444	ENSCANG00000024451	SF3A2	57	85.338	Colobus_angolensis_palliatus
ENSORLG00020017235	sf3a2	74	94.444	ENSCGRG00001001802	Sf3a2	55	85.714	Cricetulus_griseus_chok1gshd
ENSORLG00020017235	sf3a2	74	94.444	ENSCGRG00000011089	Sf3a2	94	95.055	Cricetulus_griseus_crigri
ENSORLG00020017235	sf3a2	89	89.961	ENSCSEG00000014308	sf3a2	92	90.114	Cynoglossus_semilaevis
ENSORLG00020017235	sf3a2	88	92.636	ENSCVAG00000021349	sf3a2	91	92.135	Cyprinodon_variegatus
ENSORLG00020017235	sf3a2	82	92.887	ENSDARG00000021107	sf3a2	95	88.015	Danio_rerio
ENSORLG00020017235	sf3a2	74	94.907	ENSDORG00000014445	Sf3a2	57	86.090	Dipodomys_ordii
ENSORLG00020017235	sf3a2	75	82.648	FBgn0036314	Sf3a2	91	75.486	Drosophila_melanogaster
ENSORLG00020017235	sf3a2	74	94.444	ENSEASG00005021972	SF3A2	57	85.338	Equus_asinus_asinus
ENSORLG00020017235	sf3a2	82	92.050	ENSELUG00000008471	sf3a2	88	89.179	Esox_lucius
ENSORLG00020017235	sf3a2	74	93.981	ENSFCAG00000030476	SF3A2	61	84.962	Felis_catus
ENSORLG00020017235	sf3a2	64	94.652	ENSFALG00000013785	-	61	81.702	Ficedula_albicollis
ENSORLG00020017235	sf3a2	63	95.055	ENSFDAG00000020911	-	93	95.055	Fukomys_damarensis
ENSORLG00020017235	sf3a2	82	96.234	ENSFHEG00000002392	sf3a2	91	93.258	Fundulus_heteroclitus
ENSORLG00020017235	sf3a2	82	92.887	ENSGMOG00000012186	sf3a2	89	90.299	Gadus_morhua
ENSORLG00020017235	sf3a2	74	94.907	ENSGALG00000021679	SF3A2	85	85.874	Gallus_gallus
ENSORLG00020017235	sf3a2	82	96.667	ENSGAFG00000008478	sf3a2	91	94.030	Gambusia_affinis
ENSORLG00020017235	sf3a2	82	93.305	ENSGACG00000015255	sf3a2	91	89.474	Gasterosteus_aculeatus
ENSORLG00020017235	sf3a2	59	94.118	ENSGAGG00000008500	SF3A2	83	83.482	Gopherus_agassizii
ENSORLG00020017235	sf3a2	74	94.444	ENSGGOG00000006613	SF3A2	57	85.338	Gorilla_gorilla
ENSORLG00020017235	sf3a2	88	90.272	ENSHBUG00000021796	sf3a2	99	89.726	Haplochromis_burtoni
ENSORLG00020017235	sf3a2	74	94.444	ENSHGLG00000015102	SF3A2	88	95.082	Heterocephalus_glaber_female
ENSORLG00020017235	sf3a2	74	94.444	ENSHGLG00100000418	SF3A2	88	95.082	Heterocephalus_glaber_male
ENSORLG00020017235	sf3a2	90	88.593	ENSHCOG00000001223	sf3a2	91	88.593	Hippocampus_comes
ENSORLG00020017235	sf3a2	82	91.213	ENSIPUG00000019071	sf3a2	89	87.266	Ictalurus_punctatus
ENSORLG00020017235	sf3a2	74	94.444	ENSSTOG00000007495	SF3A2	90	87.432	Ictidomys_tridecemlineatus
ENSORLG00020017235	sf3a2	74	94.444	ENSJJAG00000010635	Sf3a2	96	94.054	Jaculus_jaculus
ENSORLG00020017235	sf3a2	84	93.089	ENSKMAG00000006295	sf3a2	91	91.045	Kryptolebias_marmoratus
ENSORLG00020017235	sf3a2	82	93.305	ENSLBEG00000000677	sf3a2	99	89.796	Labrus_bergylta
ENSORLG00020017235	sf3a2	74	95.370	ENSLACG00000008744	SF3A2	85	86.517	Latimeria_chalumnae
ENSORLG00020017235	sf3a2	78	92.070	ENSLOCG00000005835	sf3a2	86	87.640	Lepisosteus_oculatus
ENSORLG00020017235	sf3a2	74	94.444	ENSMFAG00000002638	SF3A2	57	85.338	Macaca_fascicularis
ENSORLG00020017235	sf3a2	74	94.444	ENSMMUG00000010111	SF3A2	58	85.338	Macaca_mulatta
ENSORLG00020017235	sf3a2	74	94.444	ENSMNEG00000036916	SF3A2	56	85.338	Macaca_nemestrina
ENSORLG00020017235	sf3a2	82	92.469	ENSMAMG00000009881	sf3a2	99	90.136	Mastacembelus_armatus
ENSORLG00020017235	sf3a2	88	90.272	ENSMZEG00005025609	sf3a2	99	89.726	Maylandia_zebra
ENSORLG00020017235	sf3a2	74	94.907	ENSMGAG00000001950	SF3A2	85	85.874	Meleagris_gallopavo
ENSORLG00020017235	sf3a2	63	95.055	ENSMAUG00000005644	-	94	95.055	Mesocricetus_auratus
ENSORLG00020017235	sf3a2	74	94.444	ENSMICG00000015443	SF3A2	57	85.338	Microcebus_murinus
ENSORLG00020017235	sf3a2	74	94.444	ENSMOCG00000007216	Sf3a2	58	85.714	Microtus_ochrogaster
ENSORLG00020017235	sf3a2	94	80.797	ENSMMOG00000010657	sf3a2	96	82.090	Mola_mola
ENSORLG00020017235	sf3a2	74	93.981	ENSMODG00000004681	SF3A2	54	84.962	Monodelphis_domestica
ENSORLG00020017235	sf3a2	82	94.142	ENSMALG00000020442	sf3a2	99	90.476	Monopterus_albus
ENSORLG00020017235	sf3a2	74	94.444	MGP_CAROLIEiJ_G0015602	-	94	95.055	Mus_caroli
ENSORLG00020017235	sf3a2	74	94.444	ENSMUSG00000020211	Sf3a2	94	95.055	Mus_musculus
ENSORLG00020017235	sf3a2	74	94.444	MGP_PahariEiJ_G0031015	-	94	95.055	Mus_pahari
ENSORLG00020017235	sf3a2	74	94.444	MGP_SPRETEiJ_G0016420	-	94	95.055	Mus_spretus
ENSORLG00020017235	sf3a2	74	93.981	ENSMPUG00000006956	SF3A2	57	85.338	Mustela_putorius_furo
ENSORLG00020017235	sf3a2	74	93.981	ENSMLUG00000004426	-	60	84.962	Myotis_lucifugus
ENSORLG00020017235	sf3a2	63	94.505	ENSNGAG00000023309	-	94	94.505	Nannospalax_galili
ENSORLG00020017235	sf3a2	85	90.688	ENSNBRG00000019872	sf3a2	99	89.384	Neolamprologus_brichardi
ENSORLG00020017235	sf3a2	64	93.048	ENSODEG00000013722	-	100	93.048	Octodon_degus
ENSORLG00020017235	sf3a2	82	93.305	ENSONIG00000010198	sf3a2	99	89.041	Oreochromis_niloticus
ENSORLG00020017235	sf3a2	71	93.171	ENSOANG00000013649	-	98	92.718	Ornithorhynchus_anatinus
ENSORLG00020017235	sf3a2	100	99.655	ENSORLG00000015301	sf3a2	100	99.655	Oryzias_latipes
ENSORLG00020017235	sf3a2	100	99.656	ENSORLG00015017116	sf3a2	100	99.656	Oryzias_latipes_hsok
ENSORLG00020017235	sf3a2	83	97.095	ENSOMEG00000020860	sf3a2	100	95.189	Oryzias_melastigma
ENSORLG00020017235	sf3a2	74	94.444	ENSOGAG00000033389	SF3A2	57	85.338	Otolemur_garnettii
ENSORLG00020017235	sf3a2	74	94.444	ENSOARG00000014357	SF3A2	65	85.338	Ovis_aries
ENSORLG00020017235	sf3a2	74	79.630	ENSPPAG00000037864	-	57	73.308	Pan_paniscus
ENSORLG00020017235	sf3a2	74	93.981	ENSPPRG00000007798	SF3A2	56	84.962	Panthera_pardus
ENSORLG00020017235	sf3a2	74	94.444	ENSPTRG00000010227	SF3A2	57	85.338	Pan_troglodytes
ENSORLG00020017235	sf3a2	74	94.444	ENSPANG00000007949	SF3A2	57	85.338	Papio_anubis
ENSORLG00020017235	sf3a2	82	92.469	ENSPKIG00000009487	sf3a2	85	88.104	Paramormyrops_kingsleyae
ENSORLG00020017235	sf3a2	79	90.476	ENSPSIG00000010839	SF3A2	86	84.249	Pelodiscus_sinensis
ENSORLG00020017235	sf3a2	83	92.946	ENSPMGG00000017249	sf3a2	92	90.566	Periophthalmus_magnuspinnatus
ENSORLG00020017235	sf3a2	74	94.444	ENSPEMG00000021288	Sf3a2	57	85.714	Peromyscus_maniculatus_bairdii
ENSORLG00020017235	sf3a2	76	98.182	ENSPFOG00000015945	sf3a2	91	93.284	Poecilia_formosa
ENSORLG00020017235	sf3a2	76	98.182	ENSPLAG00000010052	sf3a2	91	93.657	Poecilia_latipinna
ENSORLG00020017235	sf3a2	76	98.182	ENSPMEG00000000184	sf3a2	91	93.284	Poecilia_mexicana
ENSORLG00020017235	sf3a2	76	98.182	ENSPREG00000017808	sf3a2	91	93.284	Poecilia_reticulata
ENSORLG00020017235	sf3a2	74	94.444	ENSPPYG00000009342	SF3A2	58	85.338	Pongo_abelii
ENSORLG00020017235	sf3a2	68	93.878	ENSPCAG00000014513	SF3A2	57	77.820	Procavia_capensis
ENSORLG00020017235	sf3a2	74	94.444	ENSPCOG00000020295	SF3A2	59	85.338	Propithecus_coquereli
ENSORLG00020017235	sf3a2	88	90.272	ENSPNYG00000006928	sf3a2	99	89.726	Pundamilia_nyererei
ENSORLG00020017235	sf3a2	82	92.050	ENSPNAG00000027582	sf3a2	88	88.015	Pygocentrus_nattereri
ENSORLG00020017235	sf3a2	74	93.981	ENSRNOG00000019349	Sf3a2	56	85.338	Rattus_norvegicus
ENSORLG00020017235	sf3a2	74	94.444	ENSRROG00000034440	SF3A2	57	85.338	Rhinopithecus_roxellana
ENSORLG00020017235	sf3a2	74	77.778	ENSSBOG00000026071	SF3A2	53	71.805	Saimiri_boliviensis_boliviensis
ENSORLG00020017235	sf3a2	66	84.896	ENSSHAG00000011646	-	87	76.860	Sarcophilus_harrisii
ENSORLG00020017235	sf3a2	74	93.519	ENSSHAG00000011677	-	99	84.231	Sarcophilus_harrisii
ENSORLG00020017235	sf3a2	90	87.833	ENSSFOG00015010920	sf3a2	77	88.148	Scleropages_formosus
ENSORLG00020017235	sf3a2	84	91.463	ENSSMAG00000002629	sf3a2	92	90.189	Scophthalmus_maximus
ENSORLG00020017235	sf3a2	85	91.968	ENSSDUG00000015810	sf3a2	92	91.418	Seriola_dumerili
ENSORLG00020017235	sf3a2	85	91.968	ENSSLDG00000010874	sf3a2	92	91.418	Seriola_lalandi_dorsalis
ENSORLG00020017235	sf3a2	82	92.887	ENSSPAG00000004960	sf3a2	91	90.299	Stegastes_partitus
ENSORLG00020017235	sf3a2	74	93.981	ENSSSCG00000039757	SF3A2	57	84.962	Sus_scrofa
ENSORLG00020017235	sf3a2	71	94.634	ENSTGUG00000000305	SF3A2	100	94.634	Taeniopygia_guttata
ENSORLG00020017235	sf3a2	82	92.469	ENSTRUG00000009045	sf3a2	93	89.925	Takifugu_rubripes
ENSORLG00020017235	sf3a2	91	88.806	ENSTNIG00000015318	sf3a2	93	90.299	Tetraodon_nigroviridis
ENSORLG00020017235	sf3a2	74	78.704	ENSTTRG00000010177	-	57	72.556	Tursiops_truncatus
ENSORLG00020017235	sf3a2	74	94.444	ENSVVUG00000002578	SF3A2	56	85.338	Vulpes_vulpes
ENSORLG00020017235	sf3a2	82	88.797	ENSXETG00000024943	sf3a2	65	83.764	Xenopus_tropicalis
ENSORLG00020017235	sf3a2	82	96.667	ENSXCOG00000008222	sf3a2	91	94.382	Xiphophorus_couchianus
ENSORLG00020017235	sf3a2	82	96.667	ENSXMAG00000029068	sf3a2	91	94.382	Xiphophorus_maculatus