EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020017264 (Gene tree)
Gene ID: -
Gene Symbol: srrm2
Alias: -
Full Name: serine/arginine repetitive matrix protein 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 9808 bases
Position: chr8:2056622-2066429
Accession: 101162294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020016205	cwf21	PF08312.12	6.8e-13	1	1
ENSORLP00020016247	cwf21	PF08312.12	7e-13	1	1
ENSORLP00020016220	cwf21	PF08312.12	7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020024498	-	3977	XM_011477747	ENSORLP00020016205	1243 (aa)	XP_011476049	-
ENSORLT00020033783	-	4076	-	ENSORLP00020016220	1276 (aa)	-	-
ENSORLT00020024477	-	4064	-	ENSORLP00020016247	1272 (aa)	-	-

Gene Model

Click here to download ENSORLG00020017264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020017264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020017264	srrm2	55	66.121	ENSAPOG00000008228	srrm2	54	69.182	Acanthochromis_polyacanthus
ENSORLG00020017264	srrm2	66	54.276	ENSGAFG00000005377	-	100	55.263	Gambusia_affinis
ENSORLG00020017264	srrm2	68	57.005	ENSMALG00000014782	srrm2	87	90.055	Monopterus_albus
ENSORLG00020017264	srrm2	100	96.075	ENSORLG00015008453	srrm2	100	96.075	Oryzias_latipes_hsok
ENSORLG00020017264	srrm2	68	81.164	ENSOMEG00000015409	-	90	79.054	Oryzias_melastigma
ENSORLG00020017264	srrm2	73	53.333	ENSPFOG00000004799	srrm2	86	56.446	Poecilia_formosa
ENSORLG00020017264	srrm2	69	53.698	ENSTRUG00000019812	-	67	50.161	Takifugu_rubripes