EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020017506 (Gene tree)
Gene ID: -
Gene Symbol: srsf6a
Alias: -
Full Name: serine/arginine-rich splicing factor 6a
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 9162 bases
Position: chr7:7198036-7207197
Accession: ZDB-GENE-040426-2824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020016477	RRM_1	PF00076.22	2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020024766	-	489	-	ENSORLP00020016477	162 (aa)	-	-

Gene Model

Click here to download ENSORLG00020017506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020017506's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020017506	srsf6a	89	64.430	ENSORLG00020016052	srsf4	54	64.430
ENSORLG00020017506	srsf6a	89	54.305	ENSORLG00020003281	srsf5	56	55.263
ENSORLG00020017506	srsf6a	91	35.669	ENSORLG00020009456	srsf1a	63	36.842
ENSORLG00020017506	srsf6a	52	43.678	ENSORLG00020011157	-	61	44.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020017506	srsf6a	90	70.323	ENSG00000124193	SRSF6	58	94.872	Homo_sapiens
ENSORLG00020017506	srsf6a	74	85.385	ENSAPOG00000016635	-	80	84.496	Acanthochromis_polyacanthus
ENSORLG00020017506	srsf6a	90	70.861	ENSACIG00000020091	-	99	75.000	Amphilophus_citrinellus
ENSORLG00020017506	srsf6a	90	69.231	ENSAPEG00000020746	-	55	66.667	Amphiprion_percula
ENSORLG00020017506	srsf6a	91	68.627	ENSATEG00000007255	-	60	65.385	Anabas_testudineus
ENSORLG00020017506	srsf6a	90	70.323	ENSANAG00000024080	SRSF6	58	94.872	Aotus_nancymaae
ENSORLG00020017506	srsf6a	90	69.620	ENSAMXG00000042692	-	94	79.545	Astyanax_mexicanus
ENSORLG00020017506	srsf6a	90	69.032	ENSBTAG00000008527	SRSF6	58	93.590	Bos_taurus
ENSORLG00020017506	srsf6a	90	70.323	ENSCJAG00000048403	SRSF6	58	94.872	Callithrix_jacchus
ENSORLG00020017506	srsf6a	90	69.032	ENSCAFG00000009289	SRSF6	58	93.590	Canis_familiaris
ENSORLG00020017506	srsf6a	90	69.032	ENSCAFG00020013559	SRSF6	58	93.590	Canis_lupus_dingo
ENSORLG00020017506	srsf6a	90	69.032	ENSCHIG00000015890	-	58	93.590	Capra_hircus
ENSORLG00020017506	srsf6a	90	70.323	ENSCPOG00000011761	SRSF6	58	94.872	Cavia_porcellus
ENSORLG00020017506	srsf6a	90	70.323	ENSCCAG00000026018	-	58	94.872	Cebus_capucinus
ENSORLG00020017506	srsf6a	90	61.538	ENSCCAG00000018540	-	51	60.897	Cebus_capucinus
ENSORLG00020017506	srsf6a	90	70.323	ENSCATG00000030794	SRSF6	58	94.872	Cercocebus_atys
ENSORLG00020017506	srsf6a	90	70.323	ENSCLAG00000010247	SRSF6	58	94.872	Chinchilla_lanigera
ENSORLG00020017506	srsf6a	90	69.032	ENSCGRG00001022339	Srsf6	58	92.308	Cricetulus_griseus_chok1gshd
ENSORLG00020017506	srsf6a	74	90.833	ENSCSEG00000019778	SRSF6	88	90.000	Cynoglossus_semilaevis
ENSORLG00020017506	srsf6a	74	89.167	ENSCVAG00000001863	SRSF6	92	89.167	Cyprinodon_variegatus
ENSORLG00020017506	srsf6a	91	66.460	ENSDARG00000016783	srsf6b	82	92.308	Danio_rerio
ENSORLG00020017506	srsf6a	90	70.323	ENSDORG00000028378	Srsf6	58	94.872	Dipodomys_ordii
ENSORLG00020017506	srsf6a	91	69.512	ENSELUG00000024182	SRSF6	90	81.301	Esox_lucius
ENSORLG00020017506	srsf6a	91	70.253	ENSELUG00000013506	SRSF6	70	91.026	Esox_lucius
ENSORLG00020017506	srsf6a	90	69.182	ENSGALG00000000990	SRSF6	58	94.872	Gallus_gallus
ENSORLG00020017506	srsf6a	75	80.620	ENSGAFG00000019088	-	75	80.620	Gambusia_affinis
ENSORLG00020017506	srsf6a	90	70.323	ENSGGOG00000009808	SRSF6	58	94.872	Gorilla_gorilla
ENSORLG00020017506	srsf6a	90	70.323	ENSHGLG00000007348	SRSF6	58	94.872	Heterocephalus_glaber_female
ENSORLG00020017506	srsf6a	91	74.510	ENSIPUG00000004776	-	54	72.368	Ictalurus_punctatus
ENSORLG00020017506	srsf6a	90	70.323	ENSSTOG00000010866	SRSF6	58	94.872	Ictidomys_tridecemlineatus
ENSORLG00020017506	srsf6a	90	70.323	ENSMFAG00000036925	SRSF6	58	94.872	Macaca_fascicularis
ENSORLG00020017506	srsf6a	90	70.323	ENSMMUG00000006742	SRSF6	58	94.872	Macaca_mulatta
ENSORLG00020017506	srsf6a	90	69.677	ENSMNEG00000027392	-	58	93.590	Macaca_nemestrina
ENSORLG00020017506	srsf6a	60	81.633	ENSMAMG00000023477	-	82	92.105	Mastacembelus_armatus
ENSORLG00020017506	srsf6a	89	69.799	ENSMZEG00005020658	-	50	69.799	Maylandia_zebra
ENSORLG00020017506	srsf6a	59	81.250	ENSMAUG00000019086	-	58	92.308	Mesocricetus_auratus
ENSORLG00020017506	srsf6a	90	70.323	ENSMICG00000008537	SRSF6	58	94.872	Microcebus_murinus
ENSORLG00020017506	srsf6a	90	69.032	MGP_CAROLIEiJ_G0024606	Srsf6	58	92.308	Mus_caroli
ENSORLG00020017506	srsf6a	90	69.032	ENSMUSG00000016921	Srsf6	58	92.308	Mus_musculus
ENSORLG00020017506	srsf6a	90	69.032	MGP_PahariEiJ_G0026050	Srsf6	58	92.308	Mus_pahari
ENSORLG00020017506	srsf6a	90	69.032	MGP_SPRETEiJ_G0025528	Srsf6	58	92.308	Mus_spretus
ENSORLG00020017506	srsf6a	90	69.032	ENSMPUG00000017692	SRSF6	54	70.968	Mustela_putorius_furo
ENSORLG00020017506	srsf6a	90	70.323	ENSNGAG00000017560	Srsf6	58	94.872	Nannospalax_galili
ENSORLG00020017506	srsf6a	90	70.323	ENSNLEG00000006524	SRSF6	58	94.872	Nomascus_leucogenys
ENSORLG00020017506	srsf6a	90	72.436	ENSMEUG00000014615	SRSF6	51	72.436	Notamacropus_eugenii
ENSORLG00020017506	srsf6a	59	83.333	ENSODEG00000016510	-	58	94.872	Octodon_degus
ENSORLG00020017506	srsf6a	90	45.882	ENSOCUG00000009785	-	53	49.091	Oryctolagus_cuniculus
ENSORLG00020017506	srsf6a	90	70.323	ENSPTRG00000044686	-	58	94.872	Pan_troglodytes
ENSORLG00020017506	srsf6a	90	70.323	ENSPANG00000035224	SRSF6	58	94.872	Papio_anubis
ENSORLG00020017506	srsf6a	74	90.000	ENSPKIG00000015603	-	86	90.000	Paramormyrops_kingsleyae
ENSORLG00020017506	srsf6a	86	61.074	ENSPKIG00000015703	-	83	70.270	Paramormyrops_kingsleyae
ENSORLG00020017506	srsf6a	91	74.510	ENSPKIG00000018463	-	77	93.590	Paramormyrops_kingsleyae
ENSORLG00020017506	srsf6a	90	72.436	ENSPCIG00000003820	SRSF6	58	94.872	Phascolarctos_cinereus
ENSORLG00020017506	srsf6a	91	68.125	ENSPLAG00000009243	srsf6a	79	81.600	Poecilia_latipinna
ENSORLG00020017506	srsf6a	74	81.102	ENSPREG00000001040	srsf6a	85	81.102	Poecilia_reticulata
ENSORLG00020017506	srsf6a	90	70.323	ENSPCOG00000026364	SRSF6	58	94.872	Propithecus_coquereli
ENSORLG00020017506	srsf6a	74	87.705	ENSPNAG00000023179	-	92	86.667	Pygocentrus_nattereri
ENSORLG00020017506	srsf6a	90	73.510	ENSRBIG00000041414	SRSF6	60	94.872	Rhinopithecus_bieti
ENSORLG00020017506	srsf6a	90	70.323	ENSRROG00000029989	SRSF6	58	94.872	Rhinopithecus_roxellana
ENSORLG00020017506	srsf6a	90	70.323	ENSSBOG00000033708	-	58	94.872	Saimiri_boliviensis_boliviensis
ENSORLG00020017506	srsf6a	90	70.779	ENSSFOG00015015169	SRSF6	50	71.429	Scleropages_formosus
ENSORLG00020017506	srsf6a	56	84.444	ENSSDUG00000011036	-	83	92.105	Seriola_dumerili
ENSORLG00020017506	srsf6a	56	84.444	ENSSLDG00000014858	-	83	92.105	Seriola_lalandi_dorsalis
ENSORLG00020017506	srsf6a	90	73.203	ENSSPUG00000004967	SRSF6	58	94.872	Sphenodon_punctatus
ENSORLG00020017506	srsf6a	53	84.884	ENSSPAG00000021913	-	79	90.789	Stegastes_partitus
ENSORLG00020017506	srsf6a	91	71.698	ENSSPAG00000002362	srsf6a	56	70.253	Stegastes_partitus
ENSORLG00020017506	srsf6a	90	69.032	ENSSSCG00000007362	SRSF6	51	70.968	Sus_scrofa
ENSORLG00020017506	srsf6a	90	69.032	ENSUAMG00000003559	SRSF6	58	93.590	Ursus_americanus
ENSORLG00020017506	srsf6a	59	54.167	ENSVVUG00000019276	-	55	58.974	Vulpes_vulpes