EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020017557 (Gene tree)
Gene ID: -
Gene Symbol: rabl6b
Alias: -
Full Name: RAB%2C member RAS oncogene family like 6
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 15179 bases
Position: chr9:26940109-26955287
Accession: 101159360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020016413	MMR_HSR1	PF01926.23	1.8e-05	1	1
ENSORLP00020016433	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020024721	-	3764	XM_023958777	ENSORLP00020016433	745 (aa)	XP_023814545	-
ENSORLT00020024776	-	3803	XM_023958772	ENSORLP00020032138	758 (aa)	XP_023814540	-
ENSORLT00020024743	-	3794	XM_023958774	ENSORLP00020032104	755 (aa)	XP_023814542	-
ENSORLT00020024682	-	2031	-	ENSORLP00020016413	676 (aa)	-	-

Gene Model

Click here to download ENSORLG00020017557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020017557's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020017557	rabl6b	100	71.032	ENSACIG00000010721	rabl6b	100	70.503	Amphilophus_citrinellus
ENSORLG00020017557	rabl6b	100	78.429	ENSATEG00000012055	rabl6b	100	77.763	Anabas_testudineus
ENSORLG00020017557	rabl6b	100	58.832	ENSAMXG00000038771	rabl6b	100	60.773	Astyanax_mexicanus
ENSORLG00020017557	rabl6b	100	73.862	ENSCSEG00000016135	rabl6b	100	73.533	Cynoglossus_semilaevis
ENSORLG00020017557	rabl6b	100	69.433	ENSCSEG00000012430	-	95	74.817	Cynoglossus_semilaevis
ENSORLG00020017557	rabl6b	99	60.025	ENSDARG00000077653	rabl6b	99	64.121	Danio_rerio
ENSORLG00020017557	rabl6b	100	65.256	ENSELUG00000004448	rabl6b	90	77.694	Esox_lucius
ENSORLG00020017557	rabl6b	100	75.335	ENSGAFG00000013561	rabl6b	100	78.027	Gambusia_affinis
ENSORLG00020017557	rabl6b	100	75.397	ENSGACG00000005242	rabl6b	100	75.299	Gasterosteus_aculeatus
ENSORLG00020017557	rabl6b	100	77.896	ENSHBUG00000014235	rabl6b	100	78.429	Haplochromis_burtoni
ENSORLG00020017557	rabl6b	100	62.564	ENSIPUG00000019266	rabl6	100	62.082	Ictalurus_punctatus
ENSORLG00020017557	rabl6b	86	55.363	ENSLOCG00000001402	rabl6b	96	56.289	Lepisosteus_oculatus
ENSORLG00020017557	rabl6b	100	72.848	ENSMAMG00000019516	rabl6b	100	72.185	Mastacembelus_armatus
ENSORLG00020017557	rabl6b	63	70.339	ENSMZEG00005003942	rabl6b	99	70.339	Maylandia_zebra
ENSORLG00020017557	rabl6b	64	72.581	ENSMMOG00000009459	rabl6b	97	70.975	Mola_mola
ENSORLG00020017557	rabl6b	100	77.381	ENSMALG00000002029	rabl6b	100	76.455	Monopterus_albus
ENSORLG00020017557	rabl6b	64	68.467	ENSNBRG00000012512	rabl6b	99	69.665	Neolamprologus_brichardi
ENSORLG00020017557	rabl6b	100	76.502	ENSONIG00000010408	rabl6b	100	77.437	Oreochromis_niloticus
ENSORLG00020017557	rabl6b	92	98.682	ENSORLG00015007848	rabl6b	95	98.682	Oryzias_latipes_hsok
ENSORLG00020017557	rabl6b	89	91.416	ENSOMEG00000022840	rabl6b	96	90.991	Oryzias_melastigma
ENSORLG00020017557	rabl6b	100	62.598	ENSPKIG00000007459	RABL6	100	62.745	Paramormyrops_kingsleyae
ENSORLG00020017557	rabl6b	90	59.301	ENSPCIG00000023722	RABL6	92	58.790	Phascolarctos_cinereus
ENSORLG00020017557	rabl6b	100	78.571	ENSPFOG00000003250	rabl6b	100	78.836	Poecilia_formosa
ENSORLG00020017557	rabl6b	100	78.704	ENSPLAG00000019562	rabl6b	100	78.704	Poecilia_latipinna
ENSORLG00020017557	rabl6b	100	78.704	ENSPMEG00000020472	rabl6b	100	79.101	Poecilia_mexicana
ENSORLG00020017557	rabl6b	89	79.586	ENSPREG00000014116	rabl6b	94	79.525	Poecilia_reticulata
ENSORLG00020017557	rabl6b	100	60.111	ENSPNAG00000010857	rabl6b	100	59.753	Pygocentrus_nattereri
ENSORLG00020017557	rabl6b	99	61.854	ENSSFOG00015013414	-	99	61.243	Scleropages_formosus
ENSORLG00020017557	rabl6b	100	62.781	ENSSFOG00015017388	RABL6	100	63.760	Scleropages_formosus
ENSORLG00020017557	rabl6b	88	78.711	ENSSMAG00000012543	rabl6b	96	78.338	Scophthalmus_maximus
ENSORLG00020017557	rabl6b	100	78.336	ENSSDUG00000006564	rabl6b	100	78.864	Seriola_dumerili
ENSORLG00020017557	rabl6b	100	76.190	ENSSPAG00000021033	rabl6b	96	80.564	Stegastes_partitus
ENSORLG00020017557	rabl6b	99	69.661	ENSTNIG00000010595	rabl6b	100	69.531	Tetraodon_nigroviridis