EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020017755 (Gene tree)
Gene ID: -
Gene Symbol: tarbp2
Alias: -
Full Name: TAR (HIV) RNA binding protein 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 5371 bases
Position: chr5:10324432-10329802
Accession: ZDB-GENE-030131-8085
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020016707	dsrm	PF00035.26	3e-35	1	2
ENSORLP00020016707	dsrm	PF00035.26	3e-35	2	2
ENSORLP00020016707	DND1_DSRM	PF14709.7	6.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020034035	-	1242	-	ENSORLP00020016707	345 (aa)	-	-

Gene Model

Click here to download ENSORLG00020017755's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020017755's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020017755	tarbp2	93	44.375	ENSORLG00020020348	prkra	91	44.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020017755	tarbp2	100	64.481	ENSG00000139546	TARBP2	86	92.105	Homo_sapiens
ENSORLG00020017755	tarbp2	100	91.884	ENSAPOG00000019892	tarbp2	100	91.884	Acanthochromis_polyacanthus
ENSORLG00020017755	tarbp2	100	64.208	ENSAMEG00000012601	TARBP2	96	66.667	Ailuropoda_melanoleuca
ENSORLG00020017755	tarbp2	100	89.855	ENSACIG00000016780	tarbp2	100	89.855	Amphilophus_citrinellus
ENSORLG00020017755	tarbp2	100	91.884	ENSAOCG00000005201	tarbp2	100	91.884	Amphiprion_ocellaris
ENSORLG00020017755	tarbp2	100	91.884	ENSAPEG00000008376	tarbp2	100	91.884	Amphiprion_percula
ENSORLG00020017755	tarbp2	100	90.435	ENSATEG00000025012	tarbp2	100	90.435	Anabas_testudineus
ENSORLG00020017755	tarbp2	96	69.253	ENSACAG00000001100	TARBP2	96	69.253	Anolis_carolinensis
ENSORLG00020017755	tarbp2	100	64.754	ENSANAG00000034453	TARBP2	94	74.324	Aotus_nancymaae
ENSORLG00020017755	tarbp2	97	88.955	ENSACLG00000018569	tarbp2	97	88.955	Astatotilapia_calliptera
ENSORLG00020017755	tarbp2	100	80.791	ENSAMXG00000016665	tarbp2	100	83.237	Astyanax_mexicanus
ENSORLG00020017755	tarbp2	100	64.481	ENSBTAG00000000435	TARBP2	100	64.674	Bos_taurus
ENSORLG00020017755	tarbp2	100	64.754	ENSCJAG00000018668	TARBP2	100	64.481	Callithrix_jacchus
ENSORLG00020017755	tarbp2	100	66.382	ENSCAFG00000006874	TARBP2	100	66.382	Canis_familiaris
ENSORLG00020017755	tarbp2	100	64.481	ENSCAFG00020020735	TARBP2	100	66.667	Canis_lupus_dingo
ENSORLG00020017755	tarbp2	100	64.324	ENSCHIG00000026017	TARBP2	96	66.201	Capra_hircus
ENSORLG00020017755	tarbp2	100	64.754	ENSTSYG00000035683	TARBP2	94	74.324	Carlito_syrichta
ENSORLG00020017755	tarbp2	63	68.326	ENSCAPG00000008981	TARBP2	98	68.326	Cavia_aperea
ENSORLG00020017755	tarbp2	100	63.859	ENSCPOG00000001009	TARBP2	100	64.208	Cavia_porcellus
ENSORLG00020017755	tarbp2	97	66.573	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSORLG00020017755	tarbp2	100	64.208	ENSCATG00000026344	TARBP2	94	74.324	Cercocebus_atys
ENSORLG00020017755	tarbp2	100	64.130	ENSCLAG00000009175	TARBP2	100	64.208	Chinchilla_lanigera
ENSORLG00020017755	tarbp2	100	64.208	ENSCSAG00000005479	TARBP2	100	64.402	Chlorocebus_sabaeus
ENSORLG00020017755	tarbp2	100	66.482	ENSCPBG00000000654	TARBP2	100	68.824	Chrysemys_picta_bellii
ENSORLG00020017755	tarbp2	100	64.481	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSORLG00020017755	tarbp2	100	64.110	ENSCGRG00001011856	TARBP2	96	66.382	Cricetulus_griseus_chok1gshd
ENSORLG00020017755	tarbp2	100	64.110	ENSCGRG00000009088	TARBP2	100	65.844	Cricetulus_griseus_crigri
ENSORLG00020017755	tarbp2	100	87.536	ENSCSEG00000010631	tarbp2	100	87.536	Cynoglossus_semilaevis
ENSORLG00020017755	tarbp2	100	91.014	ENSCVAG00000009832	tarbp2	100	91.014	Cyprinodon_variegatus
ENSORLG00020017755	tarbp2	100	80.460	ENSDARG00000070471	tarbp2	100	80.747	Danio_rerio
ENSORLG00020017755	tarbp2	100	64.754	ENSDNOG00000002144	TARBP2	96	66.761	Dasypus_novemcinctus
ENSORLG00020017755	tarbp2	64	68.750	ENSDORG00000001390	Tarbp2	92	68.750	Dipodomys_ordii
ENSORLG00020017755	tarbp2	86	79.381	ENSETEG00000002458	TARBP2	81	79.381	Echinops_telfairi
ENSORLG00020017755	tarbp2	95	57.798	ENSEBUG00000002377	tarbp2	98	58.716	Eptatretus_burgeri
ENSORLG00020017755	tarbp2	100	64.754	ENSEASG00005010030	TARBP2	100	64.946	Equus_asinus_asinus
ENSORLG00020017755	tarbp2	100	67.045	ENSECAG00000011695	TARBP2	94	74.324	Equus_caballus
ENSORLG00020017755	tarbp2	84	61.218	ENSEEUG00000001128	-	95	63.758	Erinaceus_europaeus
ENSORLG00020017755	tarbp2	100	83.046	ENSELUG00000010642	tarbp2	100	84.770	Esox_lucius
ENSORLG00020017755	tarbp2	100	64.754	ENSFCAG00000007757	TARBP2	100	64.674	Felis_catus
ENSORLG00020017755	tarbp2	100	64.754	ENSFDAG00000011932	TARBP2	100	66.803	Fukomys_damarensis
ENSORLG00020017755	tarbp2	94	89.506	ENSFHEG00000016118	tarbp2	100	89.506	Fundulus_heteroclitus
ENSORLG00020017755	tarbp2	100	85.014	ENSGMOG00000001290	tarbp2	100	85.014	Gadus_morhua
ENSORLG00020017755	tarbp2	63	71.689	ENSGALG00000038939	-	83	71.689	Gallus_gallus
ENSORLG00020017755	tarbp2	100	90.145	ENSGAFG00000013341	tarbp2	100	90.145	Gambusia_affinis
ENSORLG00020017755	tarbp2	100	87.042	ENSGACG00000006645	tarbp2	100	86.761	Gasterosteus_aculeatus
ENSORLG00020017755	tarbp2	100	66.759	ENSGAGG00000021169	TARBP2	100	66.759	Gopherus_agassizii
ENSORLG00020017755	tarbp2	97	66.292	ENSGGOG00000012637	TARBP2	81	85.938	Gorilla_gorilla
ENSORLG00020017755	tarbp2	100	91.594	ENSHBUG00000018639	tarbp2	100	91.594	Haplochromis_burtoni
ENSORLG00020017755	tarbp2	100	64.402	ENSHGLG00000001284	TARBP2	96	66.761	Heterocephalus_glaber_female
ENSORLG00020017755	tarbp2	100	64.402	ENSHGLG00100011274	TARBP2	96	66.761	Heterocephalus_glaber_male
ENSORLG00020017755	tarbp2	100	85.507	ENSHCOG00000001027	tarbp2	100	85.507	Hippocampus_comes
ENSORLG00020017755	tarbp2	100	81.089	ENSIPUG00000023701	tarbp2	100	81.089	Ictalurus_punctatus
ENSORLG00020017755	tarbp2	97	66.667	ENSSTOG00000003678	TARBP2	100	67.480	Ictidomys_tridecemlineatus
ENSORLG00020017755	tarbp2	100	91.014	ENSKMAG00000012142	tarbp2	100	91.014	Kryptolebias_marmoratus
ENSORLG00020017755	tarbp2	100	89.831	ENSLBEG00000015027	tarbp2	100	89.831	Labrus_bergylta
ENSORLG00020017755	tarbp2	95	64.024	ENSLACG00000007087	TARBP2	95	64.848	Latimeria_chalumnae
ENSORLG00020017755	tarbp2	100	79.656	ENSLOCG00000005711	tarbp2	100	79.885	Lepisosteus_oculatus
ENSORLG00020017755	tarbp2	72	61.940	ENSLAFG00000002620	TARBP2	95	61.940	Loxodonta_africana
ENSORLG00020017755	tarbp2	100	64.208	ENSMFAG00000013567	TARBP2	94	74.324	Macaca_fascicularis
ENSORLG00020017755	tarbp2	100	64.208	ENSMMUG00000018492	TARBP2	100	64.402	Macaca_mulatta
ENSORLG00020017755	tarbp2	100	64.208	ENSMNEG00000036477	TARBP2	94	74.324	Macaca_nemestrina
ENSORLG00020017755	tarbp2	100	65.143	ENSMLEG00000029583	TARBP2	94	74.324	Mandrillus_leucophaeus
ENSORLG00020017755	tarbp2	95	88.685	ENSMAMG00000010272	tarbp2	97	86.550	Mastacembelus_armatus
ENSORLG00020017755	tarbp2	100	91.014	ENSMZEG00005006895	tarbp2	100	91.014	Maylandia_zebra
ENSORLG00020017755	tarbp2	100	64.384	ENSMAUG00000019805	Tarbp2	96	66.667	Mesocricetus_auratus
ENSORLG00020017755	tarbp2	94	67.536	ENSMICG00000027441	TARBP2	94	74.324	Microcebus_murinus
ENSORLG00020017755	tarbp2	100	64.658	ENSMOCG00000003691	Tarbp2	96	66.952	Microtus_ochrogaster
ENSORLG00020017755	tarbp2	94	87.879	ENSMMOG00000010374	tarbp2	100	87.879	Mola_mola
ENSORLG00020017755	tarbp2	100	90.725	ENSMALG00000009773	tarbp2	100	90.725	Monopterus_albus
ENSORLG00020017755	tarbp2	100	64.658	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSORLG00020017755	tarbp2	100	64.658	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSORLG00020017755	tarbp2	100	64.658	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSORLG00020017755	tarbp2	100	64.658	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSORLG00020017755	tarbp2	100	64.850	ENSMPUG00000005944	TARBP2	100	64.850	Mustela_putorius_furo
ENSORLG00020017755	tarbp2	100	64.754	ENSMLUG00000010035	TARBP2	100	65.217	Myotis_lucifugus
ENSORLG00020017755	tarbp2	100	64.481	ENSNLEG00000017690	TARBP2	94	74.324	Nomascus_leucogenys
ENSORLG00020017755	tarbp2	96	69.970	ENSMEUG00000001916	TARBP2	96	69.970	Notamacropus_eugenii
ENSORLG00020017755	tarbp2	63	69.683	ENSOPRG00000011397	TARBP2	98	69.683	Ochotona_princeps
ENSORLG00020017755	tarbp2	60	69.737	ENSODEG00000013413	TARBP2	100	69.912	Octodon_degus
ENSORLG00020017755	tarbp2	95	86.207	ENSONIG00000005115	tarbp2	96	86.207	Oreochromis_niloticus
ENSORLG00020017755	tarbp2	100	66.213	ENSOCUG00000005700	TARBP2	100	66.576	Oryctolagus_cuniculus
ENSORLG00020017755	tarbp2	100	99.710	ENSORLG00000005209	tarbp2	100	99.710	Oryzias_latipes
ENSORLG00020017755	tarbp2	100	99.710	ENSORLG00015013237	tarbp2	100	99.710	Oryzias_latipes_hsok
ENSORLG00020017755	tarbp2	100	96.812	ENSOMEG00000018860	tarbp2	100	96.812	Oryzias_melastigma
ENSORLG00020017755	tarbp2	100	64.481	ENSOGAG00000001744	TARBP2	96	66.761	Otolemur_garnettii
ENSORLG00020017755	tarbp2	100	64.208	ENSOARG00000016437	TARBP2	96	66.667	Ovis_aries
ENSORLG00020017755	tarbp2	100	64.481	ENSPPAG00000030429	TARBP2	94	74.324	Pan_paniscus
ENSORLG00020017755	tarbp2	100	64.754	ENSPPRG00000000189	TARBP2	100	64.754	Panthera_pardus
ENSORLG00020017755	tarbp2	100	66.201	ENSPTIG00000007859	TARBP2	100	66.201	Panthera_tigris_altaica
ENSORLG00020017755	tarbp2	100	64.481	ENSPTRG00000005020	TARBP2	94	74.324	Pan_troglodytes
ENSORLG00020017755	tarbp2	100	64.208	ENSPANG00000010689	TARBP2	94	74.324	Papio_anubis
ENSORLG00020017755	tarbp2	100	78.652	ENSPKIG00000002455	tarbp2	100	78.652	Paramormyrops_kingsleyae
ENSORLG00020017755	tarbp2	100	87.536	ENSPMGG00000006497	tarbp2	100	87.536	Periophthalmus_magnuspinnatus
ENSORLG00020017755	tarbp2	100	63.760	ENSPEMG00000014285	Tarbp2	96	66.006	Peromyscus_maniculatus_bairdii
ENSORLG00020017755	tarbp2	92	60.625	ENSPMAG00000000105	tarbp2	99	56.875	Petromyzon_marinus
ENSORLG00020017755	tarbp2	100	67.536	ENSPCIG00000006672	TARBP2	92	67.536	Phascolarctos_cinereus
ENSORLG00020017755	tarbp2	100	90.435	ENSPFOG00000007586	tarbp2	100	90.435	Poecilia_formosa
ENSORLG00020017755	tarbp2	100	90.435	ENSPLAG00000017659	tarbp2	100	90.435	Poecilia_latipinna
ENSORLG00020017755	tarbp2	100	90.435	ENSPMEG00000007775	tarbp2	100	90.435	Poecilia_mexicana
ENSORLG00020017755	tarbp2	100	90.435	ENSPREG00000007815	tarbp2	100	90.435	Poecilia_reticulata
ENSORLG00020017755	tarbp2	97	65.976	ENSPPYG00000004583	TARBP2	97	66.864	Pongo_abelii
ENSORLG00020017755	tarbp2	78	63.230	ENSPCAG00000005352	TARBP2	63	68.559	Procavia_capensis
ENSORLG00020017755	tarbp2	100	64.033	ENSPCOG00000013102	TARBP2	94	74.324	Propithecus_coquereli
ENSORLG00020017755	tarbp2	100	64.208	ENSPVAG00000012286	TARBP2	100	64.208	Pteropus_vampyrus
ENSORLG00020017755	tarbp2	100	91.304	ENSPNYG00000014125	tarbp2	100	91.304	Pundamilia_nyererei
ENSORLG00020017755	tarbp2	100	82.370	ENSPNAG00000011128	tarbp2	100	82.659	Pygocentrus_nattereri
ENSORLG00020017755	tarbp2	96	66.572	ENSRNOG00000042355	Tarbp2	96	66.097	Rattus_norvegicus
ENSORLG00020017755	tarbp2	100	64.481	ENSRBIG00000027150	TARBP2	94	74.324	Rhinopithecus_bieti
ENSORLG00020017755	tarbp2	100	64.481	ENSRROG00000044783	TARBP2	94	74.324	Rhinopithecus_roxellana
ENSORLG00020017755	tarbp2	100	65.027	ENSSBOG00000027305	TARBP2	94	74.324	Saimiri_boliviensis_boliviensis
ENSORLG00020017755	tarbp2	94	70.679	ENSSHAG00000007064	TARBP2	100	70.679	Sarcophilus_harrisii
ENSORLG00020017755	tarbp2	100	77.933	ENSSFOG00015010784	tarbp2	100	78.492	Scleropages_formosus
ENSORLG00020017755	tarbp2	100	90.313	ENSSMAG00000012769	tarbp2	100	90.313	Scophthalmus_maximus
ENSORLG00020017755	tarbp2	100	92.174	ENSSDUG00000018818	tarbp2	100	92.174	Seriola_dumerili
ENSORLG00020017755	tarbp2	100	91.594	ENSSLDG00000001835	tarbp2	100	91.594	Seriola_lalandi_dorsalis
ENSORLG00020017755	tarbp2	76	66.169	ENSSARG00000001010	TARBP2	73	66.169	Sorex_araneus
ENSORLG00020017755	tarbp2	95	51.212	ENSSPUG00000005895	TARBP2	94	51.515	Sphenodon_punctatus
ENSORLG00020017755	tarbp2	100	92.754	ENSSPAG00000022797	tarbp2	100	92.754	Stegastes_partitus
ENSORLG00020017755	tarbp2	100	64.481	ENSSSCG00000000276	TARBP2	100	66.859	Sus_scrofa
ENSORLG00020017755	tarbp2	71	56.589	ENSTGUG00000017031	TARBP2	100	56.202	Taeniopygia_guttata
ENSORLG00020017755	tarbp2	100	88.406	ENSTRUG00000014379	tarbp2	100	88.406	Takifugu_rubripes
ENSORLG00020017755	tarbp2	100	89.275	ENSTNIG00000007065	tarbp2	100	89.275	Tetraodon_nigroviridis
ENSORLG00020017755	tarbp2	100	64.754	ENSTTRG00000017177	TARBP2	100	64.481	Tursiops_truncatus
ENSORLG00020017755	tarbp2	100	64.481	ENSUAMG00000009011	TARBP2	96	66.949	Ursus_americanus
ENSORLG00020017755	tarbp2	100	63.934	ENSUMAG00000010461	TARBP2	96	66.384	Ursus_maritimus
ENSORLG00020017755	tarbp2	100	64.481	ENSVVUG00000028150	TARBP2	100	66.667	Vulpes_vulpes
ENSORLG00020017755	tarbp2	97	69.767	ENSXETG00000012644	tarbp2	97	69.767	Xenopus_tropicalis
ENSORLG00020017755	tarbp2	100	89.855	ENSXMAG00000017836	tarbp2	100	89.855	Xiphophorus_maculatus