EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020017820 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 6798 bases
Position: chr1:33644957-33651754
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020032319	RVT_1	PF00078.27	2.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020025136	-	492	-	ENSORLP00020032319	163 (aa)	-	-

Gene Model

Click here to download ENSORLG00020017820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020017820's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020017820	-	69	81.416	ENSORLG00020021895	-	80	81.416
ENSORLG00020017820	-	79	93.077	ENSORLG00020008448	-	80	93.077
ENSORLG00020017820	-	67	70.992	ENSORLG00020022651	-	67	70.992
ENSORLG00020017820	-	89	75.000	ENSORLG00020017866	-	94	75.000
ENSORLG00020017820	-	69	98.214	ENSORLG00020005309	-	78	98.214
ENSORLG00020017820	-	77	86.508	ENSORLG00020014807	-	89	86.508
ENSORLG00020017820	-	61	100.000	ENSORLG00020000341	-	77	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020017820	-	67	45.217	ENSLBEG00000021860	-	74	45.217	Labrus_bergylta
ENSORLG00020017820	-	82	86.667	ENSORLG00000022894	-	75	86.667	Oryzias_latipes
ENSORLG00020017820	-	77	95.238	ENSORLG00000026838	-	75	95.238	Oryzias_latipes
ENSORLG00020017820	-	83	86.131	ENSORLG00000022972	-	90	86.131	Oryzias_latipes
ENSORLG00020017820	-	77	86.508	ENSORLG00000024721	-	86	86.508	Oryzias_latipes
ENSORLG00020017820	-	87	77.622	ENSORLG00000023269	-	89	77.622	Oryzias_latipes
ENSORLG00020017820	-	66	86.207	ENSORLG00000022176	-	73	86.207	Oryzias_latipes
ENSORLG00020017820	-	75	92.683	ENSORLG00000025417	-	81	92.683	Oryzias_latipes
ENSORLG00020017820	-	77	83.465	ENSORLG00000022721	-	73	83.465	Oryzias_latipes
ENSORLG00020017820	-	81	90.152	ENSORLG00015001036	-	77	90.152	Oryzias_latipes_hsok
ENSORLG00020017820	-	75	84.848	ENSORLG00015016137	-	90	84.848	Oryzias_latipes_hsok
ENSORLG00020017820	-	81	90.152	ENSORLG00015011500	-	67	90.152	Oryzias_latipes_hsok
ENSORLG00020017820	-	88	66.026	ENSORLG00015005894	-	82	66.026	Oryzias_latipes_hsok
ENSORLG00020017820	-	77	63.492	ENSOMEG00000014346	-	83	63.492	Oryzias_melastigma
ENSORLG00020017820	-	52	65.116	ENSOMEG00000014808	-	57	65.116	Oryzias_melastigma
ENSORLG00020017820	-	77	63.492	ENSOMEG00000007757	-	86	63.492	Oryzias_melastigma
ENSORLG00020017820	-	61	69.000	ENSOMEG00000022260	-	67	69.000	Oryzias_melastigma