EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020017866 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 10150 bases
Position: chr5:10268436-10278585
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020016820	RVT_1	PF00078.27	9.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020025467	-	477	-	ENSORLP00020016820	158 (aa)	-	-

Gene Model

Click here to download ENSORLG00020017866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020017866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020017866	-	56	96.629	ENSORLG00020000341	-	68	96.629
ENSORLG00020017866	-	73	95.690	ENSORLG00020014807	-	82	95.690
ENSORLG00020017866	-	70	77.273	ENSORLG00020022651	-	68	77.273
ENSORLG00020017866	-	94	75.000	ENSORLG00020017820	-	89	75.000
ENSORLG00020017866	-	72	77.876	ENSORLG00020021895	-	80	77.876
ENSORLG00020017866	-	83	82.443	ENSORLG00020005309	-	91	82.443
ENSORLG00020017866	-	72	94.690	ENSORLG00020008448	-	70	94.690

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020017866	-	63	50.962	ENSLBEG00000021860	-	67	50.962	Labrus_bergylta
ENSORLG00020017866	-	71	92.857	ENSORLG00000025417	-	74	92.857	Oryzias_latipes
ENSORLG00020017866	-	75	82.677	ENSORLG00000022176	-	80	82.677	Oryzias_latipes
ENSORLG00020017866	-	75	84.874	ENSORLG00000022721	-	68	84.874	Oryzias_latipes
ENSORLG00020017866	-	92	80.537	ENSORLG00000022894	-	82	80.537	Oryzias_latipes
ENSORLG00020017866	-	77	91.803	ENSORLG00000023269	-	76	91.803	Oryzias_latipes
ENSORLG00020017866	-	72	93.860	ENSORLG00000022972	-	75	93.860	Oryzias_latipes
ENSORLG00020017866	-	73	91.379	ENSORLG00000024721	-	79	91.379	Oryzias_latipes
ENSORLG00020017866	-	71	97.321	ENSORLG00000026838	-	67	97.321	Oryzias_latipes
ENSORLG00020017866	-	70	88.333	ENSORLG00015016137	-	82	88.333	Oryzias_latipes_hsok
ENSORLG00020017866	-	72	93.805	ENSORLG00015001036	-	66	93.805	Oryzias_latipes_hsok
ENSORLG00020017866	-	77	66.165	ENSORLG00015005894	-	70	66.165	Oryzias_latipes_hsok
ENSORLG00020017866	-	70	94.595	ENSORLG00015011500	-	57	94.595	Oryzias_latipes_hsok
ENSORLG00020017866	-	75	69.492	ENSOMEG00000007757	-	80	69.492	Oryzias_melastigma
ENSORLG00020017866	-	72	68.421	ENSOMEG00000022260	-	78	68.421	Oryzias_melastigma
ENSORLG00020017866	-	54	74.419	ENSOMEG00000014808	-	58	74.419	Oryzias_melastigma
ENSORLG00020017866	-	75	70.339	ENSOMEG00000014346	-	78	70.339	Oryzias_melastigma