EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020017974 (Gene tree)
Gene ID: -
Gene Symbol: e4f1
Alias: -
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 6696 bases
Position: chr8:11779877-11786572
Accession: ZDB-GENE-050913-103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020016937	zf-C2H2	PF00096.26	4.2e-29	1	4
ENSORLP00020016937	zf-C2H2	PF00096.26	4.2e-29	2	4
ENSORLP00020016937	zf-C2H2	PF00096.26	4.2e-29	3	4
ENSORLP00020016937	zf-C2H2	PF00096.26	4.2e-29	4	4
ENSORLP00020016937	zf-met	PF12874.7	5.9e-08	1	2
ENSORLP00020016937	zf-met	PF12874.7	5.9e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020034104	-	3161	-	ENSORLP00020016937	787 (aa)	-	-

Gene Model

Click here to download ENSORLG00020017974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020017974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020017974	e4f1	65	43.023	ENSORLG00020000219	-	78	46.250
ENSORLG00020017974	e4f1	57	38.667	ENSORLG00020006144	-	84	37.662
ENSORLG00020017974	e4f1	68	41.250	ENSORLG00020010171	-	98	43.421
ENSORLG00020017974	e4f1	55	41.558	ENSORLG00020004889	ZNF319	87	41.558
ENSORLG00020017974	e4f1	70	40.625	ENSORLG00020008018	-	86	41.935
ENSORLG00020017974	e4f1	50	41.250	ENSORLG00020008933	-	74	41.250
ENSORLG00020017974	e4f1	76	46.753	ENSORLG00020001912	znf236	66	46.753
ENSORLG00020017974	e4f1	60	43.077	ENSORLG00020017483	-	95	42.424
ENSORLG00020017974	e4f1	59	41.250	ENSORLG00020018069	-	93	43.750
ENSORLG00020017974	e4f1	87	49.315	ENSORLG00020009139	-	97	49.315
ENSORLG00020017974	e4f1	67	37.500	ENSORLG00020009180	-	98	43.939
ENSORLG00020017974	e4f1	62	38.667	ENSORLG00020009857	-	92	43.939
ENSORLG00020017974	e4f1	50	39.344	ENSORLG00020020419	-	83	39.344
ENSORLG00020017974	e4f1	61	41.250	ENSORLG00020009943	-	97	41.250
ENSORLG00020017974	e4f1	83	37.500	ENSORLG00020010285	znf646	63	37.500
ENSORLG00020017974	e4f1	60	47.458	ENSORLG00020017850	-	89	47.458
ENSORLG00020017974	e4f1	52	38.922	ENSORLG00020010250	-	86	40.351
ENSORLG00020017974	e4f1	58	40.741	ENSORLG00020008744	-	67	40.741
ENSORLG00020017974	e4f1	67	38.922	ENSORLG00020010560	-	98	38.824
ENSORLG00020017974	e4f1	67	51.515	ENSORLG00020017164	-	96	51.515
ENSORLG00020017974	e4f1	59	42.697	ENSORLG00020018051	prdm5	67	42.697
ENSORLG00020017974	e4f1	75	42.105	ENSORLG00020002128	-	92	42.105
ENSORLG00020017974	e4f1	50	40.260	ENSORLG00020018685	znf319b	79	40.260

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020017974	e4f1	100	68.743	ENSCSEG00000015852	e4f1	98	68.237	Cynoglossus_semilaevis
ENSORLG00020017974	e4f1	100	70.781	ENSCVAG00000002788	e4f1	100	71.537	Cyprinodon_variegatus
ENSORLG00020017974	e4f1	72	40.034	ENSEBUG00000016435	e4f1	55	59.434	Eptatretus_burgeri
ENSORLG00020017974	e4f1	99	69.828	ENSFHEG00000022551	e4f1	97	69.155	Fundulus_heteroclitus
ENSORLG00020017974	e4f1	84	61.940	ENSGMOG00000011409	e4f1	96	61.883	Gadus_morhua
ENSORLG00020017974	e4f1	100	70.839	ENSGACG00000011808	e4f1	100	70.574	Gasterosteus_aculeatus
ENSORLG00020017974	e4f1	100	64.925	ENSHCOG00000016455	e4f1	100	64.055	Hippocampus_comes
ENSORLG00020017974	e4f1	100	51.378	ENSIPUG00000005379	e4f1	57	50.570	Ictalurus_punctatus
ENSORLG00020017974	e4f1	100	71.216	ENSLBEG00000026373	e4f1	100	72.581	Labrus_bergylta
ENSORLG00020017974	e4f1	100	66.583	ENSMMOG00000007612	e4f1	100	59.925	Mola_mola
ENSORLG00020017974	e4f1	100	72.422	ENSMALG00000007314	e4f1	100	71.891	Monopterus_albus
ENSORLG00020017974	e4f1	100	95.426	ENSORLG00000009160	e4f1	100	95.426	Oryzias_latipes
ENSORLG00020017974	e4f1	100	98.221	ENSORLG00015007385	e4f1	100	98.221	Oryzias_latipes_hsok
ENSORLG00020017974	e4f1	100	89.848	ENSOMEG00000012220	e4f1	100	88.832	Oryzias_melastigma
ENSORLG00020017974	e4f1	100	54.914	ENSPKIG00000001942	e4f1	92	63.326	Paramormyrops_kingsleyae
ENSORLG00020017974	e4f1	77	68.445	ENSPMGG00000020527	e4f1	90	87.671	Periophthalmus_magnuspinnatus
ENSORLG00020017974	e4f1	89	60.841	ENSSFOG00015021291	e4f1	99	59.341	Scleropages_formosus
ENSORLG00020017974	e4f1	100	73.474	ENSSMAG00000014720	e4f1	100	74.097	Scophthalmus_maximus
ENSORLG00020017974	e4f1	96	46.650	ENSSPUG00000011420	E4F1	94	46.556	Sphenodon_punctatus
ENSORLG00020017974	e4f1	100	66.789	ENSTRUG00000005176	e4f1	100	68.010	Takifugu_rubripes
ENSORLG00020017974	e4f1	96	66.284	ENSTNIG00000018001	e4f1	100	66.284	Tetraodon_nigroviridis
ENSORLG00020017974	e4f1	83	67.257	ENSXETG00000016091	e4f1	99	67.257	Xenopus_tropicalis