EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00020018030 (Gene tree)
Gene ID
-
Gene Symbol
rbfox3b
Alias
-
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Minus strand
Length
370811 bases
Position
chr8:1028880-1399690
Accession
101159826
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020016979Fox-1_CPF12414.85.8e-4311
ENSORLP00020017008Fox-1_CPF12414.86.4e-4311
ENSORLP00020032395Fox-1_CPF12414.88.4e-4311
ENSORLP00020016869Fox-1_CPF12414.88.6e-4311
ENSORLP00020016957Fox-1_CPF12414.89.6e-4311
ENSORLP00020032411Fox-1_CPF12414.82.9e-4211
ENSORLP00020016833Fox-1_CPF12414.83.1e-4211
ENSORLP00020016869RRM_1PF00076.221.7e-1811
ENSORLP00020017008RRM_1PF00076.221.8e-1811
ENSORLP00020016957RRM_1PF00076.221.8e-1811
ENSORLP00020032395RRM_1PF00076.222.3e-1811
ENSORLP00020032411RRM_1PF00076.222.4e-1811
ENSORLP00020016833RRM_1PF00076.222.5e-1811
ENSORLP00020016979RRM_1PF00076.220.0001311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020034052-1440-ENSORLP00020016833479 (aa)--
ENSORLT00020025271-2009-ENSORLP00020032395448 (aa)--
ENSORLT00020025247-1104-ENSORLP00020016869367 (aa)--
ENSORLT00020034121-5902-ENSORLP00020016979298 (aa)--
ENSORLT00020034130-5736-ENSORLP00020017008384 (aa)--
ENSORLT00020025358-5559XM_023957269ENSORLP00020016957382 (aa)XP_023813037-
ENSORLT00020025327-2060-ENSORLP00020032411465 (aa)--
Gene Model
Click here to download ENSORLG00020018030's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020018030's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00020018030rbfox3b5966.531ENSORLG00020008976rbfox29652.500
ENSORLG00020018030rbfox3b5973.246ENSORLG00020000162rbfox1l9060.597
ENSORLG00020018030rbfox3b6959.107ENSORLG00020005676-8452.567
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020018030rbfox3b8179.667ENSG00000167281RBFOX39990.541Homo_sapiens
ENSORLG00020018030rbfox3b9969.377ENSAPOG00000015658-9170.190Acanthochromis_polyacanthus
ENSORLG00020018030rbfox3b9998.082ENSAPOG00000021630rbfox3b10098.688Acanthochromis_polyacanthus
ENSORLG00020018030rbfox3b9867.733ENSAMEG00000014170RBFOX39972.821Ailuropoda_melanoleuca
ENSORLG00020018030rbfox3b8593.930ENSACIG00000010817rbfox3b10093.968Amphilophus_citrinellus
ENSORLG00020018030rbfox3b9360.429ENSACIG00000003768-9070.859Amphilophus_citrinellus
ENSORLG00020018030rbfox3b9998.082ENSAOCG00000012358rbfox3b10098.638Amphiprion_ocellaris
ENSORLG00020018030rbfox3b9979.076ENSAOCG00000010786-9880.435Amphiprion_ocellaris
ENSORLG00020018030rbfox3b9988.798ENSAPEG00000019081rbfox3b9988.251Amphiprion_percula
ENSORLG00020018030rbfox3b9273.056ENSAPEG00000015891-9172.900Amphiprion_percula
ENSORLG00020018030rbfox3b9479.532ENSATEG00000019945rbfox3b10088.116Anabas_testudineus
ENSORLG00020018030rbfox3b8180.066ENSATEG00000023101-9780.503Anabas_testudineus
ENSORLG00020018030rbfox3b9780.223ENSACAG00000016093RBFOX39982.173Anolis_carolinensis
ENSORLG00020018030rbfox3b8179.333ENSANAG00000023457RBFOX310082.222Aotus_nancymaae
ENSORLG00020018030rbfox3b9997.541ENSACLG00000020011rbfox3b10098.168Astatotilapia_calliptera
ENSORLG00020018030rbfox3b9981.199ENSACLG00000025552-10082.561Astatotilapia_calliptera
ENSORLG00020018030rbfox3b9685.876ENSAMXG00000042841rbfox3b10085.876Astyanax_mexicanus
ENSORLG00020018030rbfox3b9982.796ENSAMXG00000037246rbfox3a10084.946Astyanax_mexicanus
ENSORLG00020018030rbfox3b8965.190ENSBTAG00000006280RBFOX310069.486Bos_taurus
ENSORLG00020018030rbfox3b8174.333ENSCJAG00000009563RBFOX310071.745Callithrix_jacchus
ENSORLG00020018030rbfox3b6684.298ENSCAFG00000005547RBFOX39979.715Canis_familiaris
ENSORLG00020018030rbfox3b8965.190ENSCAFG00020008126RBFOX310072.606Canis_lupus_dingo
ENSORLG00020018030rbfox3b8964.873ENSCHIG00000009124RBFOX310072.340Capra_hircus
ENSORLG00020018030rbfox3b8965.300ENSTSYG00000029617RBFOX310072.099Carlito_syrichta
ENSORLG00020018030rbfox3b8966.458ENSCPOG00000021703RBFOX310071.768Cavia_porcellus
ENSORLG00020018030rbfox3b8179.333ENSCCAG00000028450RBFOX310082.222Cebus_capucinus
ENSORLG00020018030rbfox3b8179.667ENSCATG00000018349RBFOX310082.540Cercocebus_atys
ENSORLG00020018030rbfox3b8966.877ENSCLAG00000006449RBFOX310072.149Chinchilla_lanigera
ENSORLG00020018030rbfox3b8179.667ENSCSAG00000002355RBFOX310082.540Chlorocebus_sabaeus
ENSORLG00020018030rbfox3b10074.545ENSCPBG00000010904RBFOX310083.706Chrysemys_picta_bellii
ENSORLG00020018030rbfox3b8179.667ENSCANG00000043120RBFOX310082.540Colobus_angolensis_palliatus
ENSORLG00020018030rbfox3b8964.669ENSCGRG00001019476Rbfox310071.883Cricetulus_griseus_chok1gshd
ENSORLG00020018030rbfox3b8964.669ENSCGRG00000003268Rbfox310071.883Cricetulus_griseus_crigri
ENSORLG00020018030rbfox3b9977.778ENSCSEG00000020606RBFOX310077.778Cynoglossus_semilaevis
ENSORLG00020018030rbfox3b9979.348ENSCSEG00000015567RBFOX39880.707Cynoglossus_semilaevis
ENSORLG00020018030rbfox3b10094.271ENSCVAG00000006882rbfox3b10098.638Cyprinodon_variegatus
ENSORLG00020018030rbfox3b10079.933ENSDARG00000074310rbfox3b9693.194Danio_rerio
ENSORLG00020018030rbfox3b9983.827ENSDARG00000010083rbfox3a10085.984Danio_rerio
ENSORLG00020018030rbfox3b6966.026ENSDNOG00000039391RBFOX38190.000Dasypus_novemcinctus
ENSORLG00020018030rbfox3b8957.188ENSDORG00000005352Rbfox310065.952Dipodomys_ordii
ENSORLG00020018030rbfox3b9664.420ENSEBUG00000002129RBFOX39970.538Eptatretus_burgeri
ENSORLG00020018030rbfox3b8353.160ENSEBUG00000013559RBFOX38156.552Eptatretus_burgeri
ENSORLG00020018030rbfox3b8180.132ENSEASG00005005059RBFOX310082.334Equus_asinus_asinus
ENSORLG00020018030rbfox3b8179.801ENSECAG00000023811RBFOX310082.019Equus_caballus
ENSORLG00020018030rbfox3b7877.465ENSEEUG00000013974RBFOX37689.333Erinaceus_europaeus
ENSORLG00020018030rbfox3b9993.151ENSELUG00000017963rbfox3b10095.013Esox_lucius
ENSORLG00020018030rbfox3b5263.776ENSELUG00000009807-6158.454Esox_lucius
ENSORLG00020018030rbfox3b9779.444ENSFCAG00000002555RBFOX310082.371Felis_catus
ENSORLG00020018030rbfox3b8867.877ENSFALG00000012288RBFOX39964.198Ficedula_albicollis
ENSORLG00020018030rbfox3b8960.502ENSFDAG00000007489RBFOX310066.755Fukomys_damarensis
ENSORLG00020018030rbfox3b9498.577ENSFHEG00000008550rbfox3b10098.577Fundulus_heteroclitus
ENSORLG00020018030rbfox3b9460.278ENSGMOG00000019304-10069.786Gadus_morhua
ENSORLG00020018030rbfox3b9781.844ENSGALG00000032889RBFOX39983.799Gallus_gallus
ENSORLG00020018030rbfox3b9990.164ENSGAFG00000005025rbfox3b10091.826Gambusia_affinis
ENSORLG00020018030rbfox3b8170.201ENSGACG00000002138-10073.016Gasterosteus_aculeatus
ENSORLG00020018030rbfox3b9783.473ENSGAGG00000020025RBFOX310083.706Gopherus_agassizii
ENSORLG00020018030rbfox3b8179.667ENSGGOG00000012546RBFOX310082.540Gorilla_gorilla
ENSORLG00020018030rbfox3b9872.615ENSHBUG00000023098-9982.659Haplochromis_burtoni
ENSORLG00020018030rbfox3b9997.808ENSHBUG00000018099rbfox3b10098.425Haplochromis_burtoni
ENSORLG00020018030rbfox3b8965.732ENSHGLG00000008679RBFOX310070.866Heterocephalus_glaber_female
ENSORLG00020018030rbfox3b8961.994ENSHGLG00100014739RBFOX310067.979Heterocephalus_glaber_male
ENSORLG00020018030rbfox3b8573.482ENSHCOG00000001863RBFOX39374.921Hippocampus_comes
ENSORLG00020018030rbfox3b9876.190ENSHCOG00000007444RBFOX39480.541Hippocampus_comes
ENSORLG00020018030rbfox3b9463.953ENSIPUG00000021966rbfox3b9885.227Ictalurus_punctatus
ENSORLG00020018030rbfox3b9981.941ENSIPUG00000012010rbfox3a10084.655Ictalurus_punctatus
ENSORLG00020018030rbfox3b8959.707ENSSTOG00000026817RBFOX310067.568Ictidomys_tridecemlineatus
ENSORLG00020018030rbfox3b8963.924ENSJJAG00000014167Rbfox310072.340Jaculus_jaculus
ENSORLG00020018030rbfox3b9997.808ENSKMAG00000006726rbfox3b10098.638Kryptolebias_marmoratus
ENSORLG00020018030rbfox3b9985.559ENSLBEG00000022508-10085.559Labrus_bergylta
ENSORLG00020018030rbfox3b9998.082ENSLBEG00000004030rbfox3b10098.082Labrus_bergylta
ENSORLG00020018030rbfox3b5062.703ENSLACG00000000021-9564.865Latimeria_chalumnae
ENSORLG00020018030rbfox3b9862.817ENSLACG00000018409-10069.367Latimeria_chalumnae
ENSORLG00020018030rbfox3b10079.217ENSLOCG00000012267rbfox3a9890.184Lepisosteus_oculatus
ENSORLG00020018030rbfox3b9865.352ENSLAFG00000016623RBFOX310072.340Loxodonta_africana
ENSORLG00020018030rbfox3b8962.857ENSMFAG00000002247RBFOX310072.022Macaca_fascicularis
ENSORLG00020018030rbfox3b8179.667ENSMMUG00000023028RBFOX310082.540Macaca_mulatta
ENSORLG00020018030rbfox3b8179.333ENSMNEG00000041147RBFOX310082.222Macaca_nemestrina
ENSORLG00020018030rbfox3b8179.667ENSMLEG00000025686RBFOX310082.540Mandrillus_leucophaeus
ENSORLG00020018030rbfox3b8587.859ENSMAMG00000019810rbfox3b10087.937Mastacembelus_armatus
ENSORLG00020018030rbfox3b9870.462ENSMAMG00000020600-9978.161Mastacembelus_armatus
ENSORLG00020018030rbfox3b8261.310ENSMZEG00005003055-8162.798Maylandia_zebra
ENSORLG00020018030rbfox3b9997.808ENSMZEG00005000781rbfox3b10098.425Maylandia_zebra
ENSORLG00020018030rbfox3b6079.638ENSMGAG00000005600RBFOX38380.455Meleagris_gallopavo
ENSORLG00020018030rbfox3b8966.456ENSMAUG00000013543Rbfox310071.809Mesocricetus_auratus
ENSORLG00020018030rbfox3b9971.865ENSMICG00000014898RBFOX310082.166Microcebus_murinus
ENSORLG00020018030rbfox3b8963.924ENSMOCG00000015373Rbfox310071.277Microtus_ochrogaster
ENSORLG00020018030rbfox3b10092.228ENSMMOG00000020193rbfox3b10096.477Mola_mola
ENSORLG00020018030rbfox3b9779.666ENSMODG00000002089RBFOX39981.616Monodelphis_domestica
ENSORLG00020018030rbfox3b9982.834ENSMALG00000018270-10084.196Monopterus_albus
ENSORLG00020018030rbfox3b9996.164ENSMALG00000020407rbfox3b10097.003Monopterus_albus
ENSORLG00020018030rbfox3b8178.333MGP_CAROLIEiJ_G0017487Rbfox39689.209Mus_caroli
ENSORLG00020018030rbfox3b8180.066ENSMUSG00000025576Rbfox39689.209Mus_musculus
ENSORLG00020018030rbfox3b8179.070MGP_PahariEiJ_G0018614Rbfox39689.928Mus_pahari
ENSORLG00020018030rbfox3b8178.667MGP_SPRETEiJ_G0018331Rbfox39689.209Mus_spretus
ENSORLG00020018030rbfox3b9863.912ENSMPUG00000012319RBFOX39974.278Mustela_putorius_furo
ENSORLG00020018030rbfox3b8964.984ENSNGAG00000018006Rbfox310072.414Nannospalax_galili
ENSORLG00020018030rbfox3b9867.183ENSNBRG00000022885-9176.205Neolamprologus_brichardi
ENSORLG00020018030rbfox3b10092.969ENSNBRG00000010102rbfox3b10097.275Neolamprologus_brichardi
ENSORLG00020018030rbfox3b8555.238ENSNLEG00000000153-9655.556Nomascus_leucogenys
ENSORLG00020018030rbfox3b8687.234ENSMEUG00000004218-10053.889Notamacropus_eugenii
ENSORLG00020018030rbfox3b7381.667ENSOPRG00000016279-7183.333Ochotona_princeps
ENSORLG00020018030rbfox3b8181.395ENSODEG00000009433RBFOX310081.962Octodon_degus
ENSORLG00020018030rbfox3b10094.531ENSONIG00000009549rbfox3b10098.910Oreochromis_niloticus
ENSORLG00020018030rbfox3b9972.121ENSONIG00000007282-9980.826Oreochromis_niloticus
ENSORLG00020018030rbfox3b6961.409ENSOCUG00000014217RBFOX38261.074Oryctolagus_cuniculus
ENSORLG00020018030rbfox3b100100.000ENSORLG00000000905rbfox3b8799.376Oryzias_latipes
ENSORLG00020018030rbfox3b10099.740ENSORLG00015009200rbfox3b10099.740Oryzias_latipes_hsok
ENSORLG00020018030rbfox3b8699.088ENSOMEG00000014677rbfox3b8699.088Oryzias_melastigma
ENSORLG00020018030rbfox3b9870.062ENSOGAG00000029595RBFOX39776.033Otolemur_garnettii
ENSORLG00020018030rbfox3b9751.149ENSOARG00000002908RBFOX39957.908Ovis_aries
ENSORLG00020018030rbfox3b6981.176ENSPPAG00000025383RBFOX39981.597Pan_paniscus
ENSORLG00020018030rbfox3b8964.516ENSPPRG00000007819RBFOX310072.394Panthera_pardus
ENSORLG00020018030rbfox3b8179.667ENSPTRG00000009727RBFOX310082.540Pan_troglodytes
ENSORLG00020018030rbfox3b8179.667ENSPANG00000019837RBFOX310082.540Papio_anubis
ENSORLG00020018030rbfox3b9868.942ENSPKIG00000022633-9669.359Paramormyrops_kingsleyae
ENSORLG00020018030rbfox3b9889.153ENSPKIG00000010299rbfox3a9988.439Paramormyrops_kingsleyae
ENSORLG00020018030rbfox3b8791.049ENSPMGG00000008000rbfox3b10091.975Periophthalmus_magnuspinnatus
ENSORLG00020018030rbfox3b8964.557ENSPEMG00000010500Rbfox310071.809Peromyscus_maniculatus_bairdii
ENSORLG00020018030rbfox3b8979.478ENSPCIG00000005766RBFOX310080.919Phascolarctos_cinereus
ENSORLG00020018030rbfox3b10094.271ENSPFOG00000018294rbfox3b10098.688Poecilia_formosa
ENSORLG00020018030rbfox3b6593.724ENSPLAG00000000481rbfox3b7894.071Poecilia_latipinna
ENSORLG00020018030rbfox3b9498.221ENSPMEG00000022997rbfox3b10098.221Poecilia_mexicana
ENSORLG00020018030rbfox3b9997.820ENSPREG00000012886rbfox3b10098.113Poecilia_reticulata
ENSORLG00020018030rbfox3b7674.823ENSPPYG00000008704RBFOX39970.796Pongo_abelii
ENSORLG00020018030rbfox3b8165.896ENSPCAG00000001401RBFOX310070.360Procavia_capensis
ENSORLG00020018030rbfox3b9465.559ENSPCOG00000012689RBFOX310071.191Propithecus_coquereli
ENSORLG00020018030rbfox3b8159.366ENSPVAG00000015243RBFOX310063.812Pteropus_vampyrus
ENSORLG00020018030rbfox3b9976.230ENSPNYG00000009079-9676.902Pundamilia_nyererei
ENSORLG00020018030rbfox3b9985.598ENSPNYG00000010414rbfox3b9985.598Pundamilia_nyererei
ENSORLG00020018030rbfox3b9983.065ENSPNAG00000002889rbfox3a10085.676Pygocentrus_nattereri
ENSORLG00020018030rbfox3b9478.292ENSPNAG00000018173rbfox3b9078.648Pygocentrus_nattereri
ENSORLG00020018030rbfox3b8179.070ENSRNOG00000003386Rbfox310081.646Rattus_norvegicus
ENSORLG00020018030rbfox3b9779.444ENSRBIG00000040449RBFOX39981.389Rhinopithecus_bieti
ENSORLG00020018030rbfox3b8179.667ENSRROG00000000766RBFOX310082.540Rhinopithecus_roxellana
ENSORLG00020018030rbfox3b8179.333ENSSBOG00000031591RBFOX310082.222Saimiri_boliviensis_boliviensis
ENSORLG00020018030rbfox3b8979.478ENSSHAG00000016076RBFOX310080.919Sarcophilus_harrisii
ENSORLG00020018030rbfox3b10087.708ENSSFOG00015023260rbfox3a10090.033Scleropages_formosus
ENSORLG00020018030rbfox3b9973.597ENSSFOG00015004716RBFOX310073.597Scleropages_formosus
ENSORLG00020018030rbfox3b10097.656ENSSMAG00000012618rbfox3b8797.656Scophthalmus_maximus
ENSORLG00020018030rbfox3b10082.000ENSSMAG00000019052-10083.758Scophthalmus_maximus
ENSORLG00020018030rbfox3b9498.577ENSSDUG00000023183rbfox3b10098.577Seriola_dumerili
ENSORLG00020018030rbfox3b9976.087ENSSDUG00000015801-9878.090Seriola_dumerili
ENSORLG00020018030rbfox3b9998.356ENSSLDG00000000149rbfox3b10098.910Seriola_lalandi_dorsalis
ENSORLG00020018030rbfox3b9979.348ENSSLDG00000016098-9880.707Seriola_lalandi_dorsalis
ENSORLG00020018030rbfox3b9882.034ENSSPUG00000011733RBFOX39983.758Sphenodon_punctatus
ENSORLG00020018030rbfox3b9989.344ENSSPAG00000017571rbfox3b9989.344Stegastes_partitus
ENSORLG00020018030rbfox3b7477.574ENSSPAG00000004898-8578.049Stegastes_partitus
ENSORLG00020018030rbfox3b7480.657ENSSSCG00000039498RBFOX310072.372Sus_scrofa
ENSORLG00020018030rbfox3b8989.254ENSTRUG00000004894rbfox3b9789.914Takifugu_rubripes
ENSORLG00020018030rbfox3b9978.056ENSTNIG00000011278rbfox3b9982.532Tetraodon_nigroviridis
ENSORLG00020018030rbfox3b5359.402ENSTBEG00000004296-10049.462Tupaia_belangeri
ENSORLG00020018030rbfox3b9055.874ENSTTRG00000003676RBFOX310066.759Tursiops_truncatus
ENSORLG00020018030rbfox3b8180.000ENSUAMG00000004668RBFOX310082.857Ursus_americanus
ENSORLG00020018030rbfox3b9779.778ENSVVUG00000017864RBFOX310082.540Vulpes_vulpes
ENSORLG00020018030rbfox3b9857.925ENSXETG00000020236rbfox39863.049Xenopus_tropicalis
ENSORLG00020018030rbfox3b9892.857ENSXCOG00000018262rbfox3b10097.230Xiphophorus_couchianus
ENSORLG00020018030rbfox3b9998.082ENSXMAG00000012939rbfox3b10098.950Xiphophorus_maculatus

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