EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00020018173 (Gene tree)
Gene ID
-
Gene Symbol
SRL (1 of many)
Alias
-
Full Name
sarcalumenin
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Plus strand
Length
5290 bases
Position
chr1:33534465-33539754
Accession
11295
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020032556MMR_HSR1PF01926.237.2e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020025600SRL (1 of many)-2011359-ENSORLP00020032556452 (aa)--
Gene Model
Click here to download ENSORLG00020018173's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020018173's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00020018173SRL8832.161ENSORLG00020001245ehd47032.161
ENSORLG00020018173SRL9775.225ENSORLG00020019784srl8176.904
ENSORLG00020018173SRL8134.877ENSORLG00020017051ehd2b6634.877
ENSORLG00020018173SRL8732.316ENSORLG00020013250-6932.316
ENSORLG00020018173SRL8632.990ENSORLG00020018451ehd1a7032.990
ENSORLG00020018173SRL8232.708ENSORLG00020002121ehd37032.908
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020018173SRL9973.626ENSG00000185739SRL9975.587Homo_sapiens
ENSORLG00020018173SRL9888.514ENSAPOG00000012432SRL9988.514Acanthochromis_polyacanthus
ENSORLG00020018173SRL9775.621ENSAPOG00000018093srl9975.455Acanthochromis_polyacanthus
ENSORLG00020018173SRL9774.775ENSAMEG00000010862SRL5074.944Ailuropoda_melanoleuca
ENSORLG00020018173SRL9887.640ENSACIG00000015419SRL10087.640Amphilophus_citrinellus
ENSORLG00020018173SRL9776.072ENSACIG00000015799srl9876.072Amphilophus_citrinellus
ENSORLG00020018173SRL9887.305ENSAOCG00000017049SRL9887.305Amphiprion_ocellaris
ENSORLG00020018173SRL9475.638ENSAOCG00000007574srl9975.638Amphiprion_ocellaris
ENSORLG00020018173SRL9775.395ENSAPEG00000006911srl9475.395Amphiprion_percula
ENSORLG00020018173SRL9883.108ENSAPEG00000006533SRL9883.296Amphiprion_percula
ENSORLG00020018173SRL9775.225ENSATEG00000024315srl9475.395Anabas_testudineus
ENSORLG00020018173SRL9984.483ENSATEG00000009643SRL5384.483Anabas_testudineus
ENSORLG00020018173SRL9673.068ENSACAG00000016380SRL8473.026Anolis_carolinensis
ENSORLG00020018173SRL9883.585ENSACLG00000024674SRL5784.416Astatotilapia_calliptera
ENSORLG00020018173SRL9775.395ENSACLG00000027685srl9775.225Astatotilapia_calliptera
ENSORLG00020018173SRL9379.286ENSAMXG00000038693SRL10076.159Astyanax_mexicanus
ENSORLG00020018173SRL9776.298ENSAMXG00000018789srl8776.298Astyanax_mexicanus
ENSORLG00020018173SRL9775.169ENSBTAG00000001078SRL5675.169Bos_taurus
ENSORLG00020018173SRL9775.113ENSCJAG00000019750SRL9673.626Callithrix_jacchus
ENSORLG00020018173SRL9974.336ENSCAFG00000019233SRL8374.775Canis_familiaris
ENSORLG00020018173SRL9774.944ENSCAFG00020025024SRL5574.944Canis_lupus_dingo
ENSORLG00020018173SRL9775.169ENSCHIG00000017927SRL5575.169Capra_hircus
ENSORLG00020018173SRL9974.393ENSTSYG00000007919SRL9976.291Carlito_syrichta
ENSORLG00020018173SRL9874.279ENSCPOG00000012643SRL9674.279Cavia_porcellus
ENSORLG00020018173SRL9771.655ENSCCAG00000032646SRL10077.309Cebus_capucinus
ENSORLG00020018173SRL9974.115ENSCATG00000032227-9673.626Cercocebus_atys
ENSORLG00020018173SRL9874.723ENSCLAG00000016242SRL9674.723Chinchilla_lanigera
ENSORLG00020018173SRL8478.961ENSCHOG00000001618SRL5278.961Choloepus_hoffmanni
ENSORLG00020018173SRL9978.093ENSCPBG00000026371SRL9671.767Chrysemys_picta_bellii
ENSORLG00020018173SRL9356.190ENSCING00000005231-9456.190Ciona_intestinalis
ENSORLG00020018173SRL9973.407ENSCANG00000035872SRL9975.587Colobus_angolensis_palliatus
ENSORLG00020018173SRL9973.742ENSCGRG00001016630Srl9674.501Cricetulus_griseus_chok1gshd
ENSORLG00020018173SRL9973.742ENSCGRG00000005458Srl9674.501Cricetulus_griseus_crigri
ENSORLG00020018173SRL9981.838ENSCSEG00000011866SRL9281.838Cynoglossus_semilaevis
ENSORLG00020018173SRL9775.169ENSCSEG00000016151srl9575.000Cynoglossus_semilaevis
ENSORLG00020018173SRL9886.928ENSCVAG00000022465SRL6186.928Cyprinodon_variegatus
ENSORLG00020018173SRL9776.244ENSCVAG00000003513srl9676.244Cyprinodon_variegatus
ENSORLG00020018173SRL9777.629ENSDARG00000104587srl9477.629Danio_rerio
ENSORLG00020018173SRL8382.552ENSDARG00000112959CABZ01072309.110082.552Danio_rerio
ENSORLG00020018173SRL9774.492ENSDNOG00000011643SRL5374.492Dasypus_novemcinctus
ENSORLG00020018173SRL9874.388ENSDORG00000014807Srl9474.550Dipodomys_ordii
ENSORLG00020018173SRL7964.986ENSEBUG00000015937srl9064.986Eptatretus_burgeri
ENSORLG00020018173SRL9775.395ENSEASG00005000942SRL5375.395Equus_asinus_asinus
ENSORLG00020018173SRL9974.229ENSECAG00000024219SRL9475.395Equus_caballus
ENSORLG00020018173SRL9873.536ENSELUG00000015616srl9573.536Esox_lucius
ENSORLG00020018173SRL9775.339ENSFCAG00000022075SRL9375.339Felis_catus
ENSORLG00020018173SRL9875.168ENSFALG00000004328SRL6375.168Ficedula_albicollis
ENSORLG00020018173SRL9874.501ENSFDAG00000006199SRL9674.501Fukomys_damarensis
ENSORLG00020018173SRL9888.989ENSFHEG00000011854SRL10088.889Fundulus_heteroclitus
ENSORLG00020018173SRL9775.847ENSFHEG00000011239srl9675.847Fundulus_heteroclitus
ENSORLG00020018173SRL9773.568ENSGMOG00000014954srl10073.568Gadus_morhua
ENSORLG00020018173SRL9874.497ENSGALG00000038884SRL9574.497Gallus_gallus
ENSORLG00020018173SRL9889.640ENSGAFG00000016984SRL9989.640Gambusia_affinis
ENSORLG00020018173SRL9776.072ENSGAFG00000000010srl9676.072Gambusia_affinis
ENSORLG00020018173SRL9773.407ENSGACG00000011332srl10073.407Gasterosteus_aculeatus
ENSORLG00020018173SRL9974.115ENSGGOG00000011312-9673.626Gorilla_gorilla
ENSORLG00020018173SRL9883.801ENSHBUG00000015710SRL5784.632Haplochromis_burtoni
ENSORLG00020018173SRL9775.395ENSHBUG00000007581srl9775.225Haplochromis_burtoni
ENSORLG00020018173SRL9874.501ENSHGLG00000015271SRL9674.501Heterocephalus_glaber_female
ENSORLG00020018173SRL9874.501ENSHGLG00100019378SRL9674.501Heterocephalus_glaber_male
ENSORLG00020018173SRL9783.772ENSHCOG00000001012SRL5083.772Hippocampus_comes
ENSORLG00020018173SRL9775.000ENSHCOG00000008687srl9875.000Hippocampus_comes
ENSORLG00020018173SRL9771.179ENSIPUG00000011609SRL10071.179Ictalurus_punctatus
ENSORLG00020018173SRL9776.126ENSIPUG00000012513srl9576.126Ictalurus_punctatus
ENSORLG00020018173SRL9974.558ENSSTOG00000021151-9674.723Ictidomys_tridecemlineatus
ENSORLG00020018173SRL9874.945ENSJJAG00000016400Srl9674.945Jaculus_jaculus
ENSORLG00020018173SRL9577.726ENSKMAG00000014115srl9278.282Kryptolebias_marmoratus
ENSORLG00020018173SRL9690.847ENSKMAG00000019537SRL10090.847Kryptolebias_marmoratus
ENSORLG00020018173SRL9986.313ENSLBEG00000013811SRL9886.313Labrus_bergylta
ENSORLG00020018173SRL9874.554ENSLBEG00000026643srl9574.554Labrus_bergylta
ENSORLG00020018173SRL9873.154ENSLACG00000002825SRL9973.154Latimeria_chalumnae
ENSORLG00020018173SRL9875.446ENSLOCG00000002644srl9675.446Lepisosteus_oculatus
ENSORLG00020018173SRL9675.057ENSLAFG00000006329SRL5075.057Loxodonta_africana
ENSORLG00020018173SRL9375.587ENSMFAG00000037383SRL9975.587Macaca_fascicularis
ENSORLG00020018173SRL10073.144ENSMNEG00000019236-9773.144Macaca_nemestrina
ENSORLG00020018173SRL9968.502ENSMLEG00000032156SRL9668.502Mandrillus_leucophaeus
ENSORLG00020018173SRL9984.549ENSMAMG00000013756SRL5484.549Mastacembelus_armatus
ENSORLG00020018173SRL9775.225ENSMAMG00000023322srl9475.225Mastacembelus_armatus
ENSORLG00020018173SRL9883.585ENSMZEG00005004010SRL5884.416Maylandia_zebra
ENSORLG00020018173SRL9775.395ENSMZEG00005004548srl9775.225Maylandia_zebra
ENSORLG00020018173SRL9874.497ENSMGAG00000009342SRL9577.984Meleagris_gallopavo
ENSORLG00020018173SRL9974.066ENSMICG00000032307SRL9375.566Microcebus_murinus
ENSORLG00020018173SRL9874.058ENSMOCG00000008208Srl9674.058Microtus_ochrogaster
ENSORLG00020018173SRL9874.777ENSMMOG00000013970srl9974.777Mola_mola
ENSORLG00020018173SRL9784.061ENSMMOG00000021572SRL9984.061Mola_mola
ENSORLG00020018173SRL9975.055ENSMODG00000016380-5175.055Monodelphis_domestica
ENSORLG00020018173SRL9287.229ENSMALG00000000670SRL9887.229Monopterus_albus
ENSORLG00020018173SRL9774.661ENSMALG00000005039srl9874.492Monopterus_albus
ENSORLG00020018173SRL9875.223MGP_CAROLIEiJ_G0020400Srl9575.056Mus_caroli
ENSORLG00020018173SRL9875.223ENSMUSG00000022519Srl9575.056Mus_musculus
ENSORLG00020018173SRL9875.223MGP_SPRETEiJ_G0021294Srl9575.056Mus_spretus
ENSORLG00020018173SRL9774.944ENSMPUG00000015025SRL5375.283Mustela_putorius_furo
ENSORLG00020018173SRL9775.621ENSMLUG00000030733SRL5675.621Myotis_lucifugus
ENSORLG00020018173SRL9974.779ENSNGAG00000019741Srl9674.779Nannospalax_galili
ENSORLG00020018173SRL9883.117ENSNBRG00000002422SRL6181.663Neolamprologus_brichardi
ENSORLG00020018173SRL9775.395ENSNBRG00000023775srl9475.395Neolamprologus_brichardi
ENSORLG00020018173SRL9870.444ENSNLEG00000029051SRL9570.444Nomascus_leucogenys
ENSORLG00020018173SRL9969.912ENSOPRG00000000477-5469.147Ochotona_princeps
ENSORLG00020018173SRL9975.000ENSODEG00000013256SRL9675.000Octodon_degus
ENSORLG00020018173SRL9775.000ENSONIG00000005192srl9475.000Oreochromis_niloticus
ENSORLG00020018173SRL9775.395ENSORLG00000008291srl9376.904Oryzias_latipes
ENSORLG00020018173SRL10099.558ENSORLG00000015064SRL10099.558Oryzias_latipes
ENSORLG00020018173SRL9775.169ENSORLG00015009342srl9175.169Oryzias_latipes_hsok
ENSORLG00020018173SRL10099.115ENSORLG00015019063SRL10099.115Oryzias_latipes_hsok
ENSORLG00020018173SRL9775.621ENSOMEG00000010006srl9775.626Oryzias_melastigma
ENSORLG00020018173SRL9893.926ENSOMEG00000005682SRL5493.926Oryzias_melastigma
ENSORLG00020018173SRL9675.057ENSOGAG00000029266SRL5475.057Otolemur_garnettii
ENSORLG00020018173SRL9775.169ENSOARG00000003074SRL5675.169Ovis_aries
ENSORLG00020018173SRL9973.626ENSPPAG00000024919-9975.587Pan_paniscus
ENSORLG00020018173SRL9775.339ENSPPRG00000010274SRL9976.291Panthera_pardus
ENSORLG00020018173SRL9775.339ENSPTIG00000015162SRL9976.291Panthera_tigris_altaica
ENSORLG00020018173SRL9973.626ENSPTRG00000007712SRL9975.587Pan_troglodytes
ENSORLG00020018173SRL10073.144ENSPANG00000013804SRL9873.144Papio_anubis
ENSORLG00020018173SRL9973.614ENSPKIG00000024974SRL9073.614Paramormyrops_kingsleyae
ENSORLG00020018173SRL9777.477ENSPKIG00000006405srl9477.477Paramormyrops_kingsleyae
ENSORLG00020018173SRL9774.492ENSPSIG00000008586SRL5074.492Pelodiscus_sinensis
ENSORLG00020018173SRL9874.720ENSPMGG00000021081srl9674.720Periophthalmus_magnuspinnatus
ENSORLG00020018173SRL9785.160ENSPMGG00000023505-9985.160Periophthalmus_magnuspinnatus
ENSORLG00020018173SRL9874.501ENSPEMG00000015842Srl9674.501Peromyscus_maniculatus_bairdii
ENSORLG00020018173SRL9163.972ENSPMAG00000004786srl9963.972Petromyzon_marinus
ENSORLG00020018173SRL9875.615ENSPCIG00000012128SRL9875.615Phascolarctos_cinereus
ENSORLG00020018173SRL9774.286ENSPFOG00000011408srl9474.123Poecilia_formosa
ENSORLG00020018173SRL9776.072ENSPLAG00000008017srl9676.072Poecilia_latipinna
ENSORLG00020018173SRL9889.213ENSPLAG00000002932SRL9989.213Poecilia_latipinna
ENSORLG00020018173SRL9985.776ENSPMEG00000005890SRL6185.991Poecilia_mexicana
ENSORLG00020018173SRL9776.072ENSPMEG00000006745srl9676.072Poecilia_mexicana
ENSORLG00020018173SRL9889.888ENSPREG00000000315SRL9989.888Poecilia_reticulata
ENSORLG00020018173SRL9775.847ENSPREG00000007751srl9875.847Poecilia_reticulata
ENSORLG00020018173SRL9475.000ENSPPYG00000007053SRL9975.000Pongo_abelii
ENSORLG00020018173SRL9674.830ENSPCAG00000003378-5074.830Procavia_capensis
ENSORLG00020018173SRL9973.407ENSPCOG00000023135SRL9975.822Propithecus_coquereli
ENSORLG00020018173SRL9775.169ENSPVAG00000006586SRL5475.169Pteropus_vampyrus
ENSORLG00020018173SRL9775.395ENSPNYG00000001200srl9775.225Pundamilia_nyererei
ENSORLG00020018173SRL9883.585ENSPNYG00000003423SRL5784.416Pundamilia_nyererei
ENSORLG00020018173SRL9775.225ENSPNAG00000023106srl9475.225Pygocentrus_nattereri
ENSORLG00020018173SRL9879.148ENSPNAG00000007361-9279.148Pygocentrus_nattereri
ENSORLG00020018173SRL9973.961ENSRNOG00000005269Srl5173.961Rattus_norvegicus
ENSORLG00020018173SRL9974.115ENSRBIG00000042358SRL5074.115Rhinopithecus_bieti
ENSORLG00020018173SRL9775.113ENSSBOG00000029273SRL9673.626Saimiri_boliviensis_boliviensis
ENSORLG00020018173SRL9975.166ENSSHAG00000011715-5175.166Sarcophilus_harrisii
ENSORLG00020018173SRL9776.126ENSSFOG00015009773srl9576.510Scleropages_formosus
ENSORLG00020018173SRL9774.434ENSSFOG00015021327SRL5073.333Scleropages_formosus
ENSORLG00020018173SRL9974.286ENSSMAG00000016274srl9974.286Scophthalmus_maximus
ENSORLG00020018173SRL9884.052ENSSMAG00000002232SRL5085.466Scophthalmus_maximus
ENSORLG00020018173SRL9886.889ENSSDUG00000009161SRL9986.889Seriola_dumerili
ENSORLG00020018173SRL9775.000ENSSDUG00000010808srl9875.000Seriola_dumerili
ENSORLG00020018173SRL9775.169ENSSLDG00000022024srl9675.000Seriola_lalandi_dorsalis
ENSORLG00020018173SRL9786.154ENSSLDG00000014601SRL9986.813Seriola_lalandi_dorsalis
ENSORLG00020018173SRL9874.107ENSSPUG00000016859SRL9974.107Sphenodon_punctatus
ENSORLG00020018173SRL9775.113ENSSPAG00000019105srl9475.113Stegastes_partitus
ENSORLG00020018173SRL9888.063ENSSPAG00000014254SRL9988.063Stegastes_partitus
ENSORLG00020018173SRL9775.395ENSSSCG00000007949SRL9975.395Sus_scrofa
ENSORLG00020018173SRL8079.558ENSTGUG00000016121-10079.558Taeniopygia_guttata
ENSORLG00020018173SRL9875.168ENSTGUG00000003951-9875.168Taeniopygia_guttata
ENSORLG00020018173SRL9775.621ENSTRUG00000006005srl9475.621Takifugu_rubripes
ENSORLG00020018173SRL9486.118ENSTRUG00000013310SRL5686.118Takifugu_rubripes
ENSORLG00020018173SRL9775.395ENSTNIG00000009739srl9475.395Tetraodon_nigroviridis
ENSORLG00020018173SRL9775.169ENSUAMG00000005701SRL5575.169Ursus_americanus
ENSORLG00020018173SRL9774.944ENSUMAG00000002574SRL5574.944Ursus_maritimus
ENSORLG00020018173SRL9874.777ENSXETG00000017313srl9974.777Xenopus_tropicalis
ENSORLG00020018173SRL9889.414ENSXCOG00000014584SRL9989.414Xiphophorus_couchianus
ENSORLG00020018173SRL9277.751ENSXCOG00000010424srl9677.751Xiphophorus_couchianus
ENSORLG00020018173SRL9775.847ENSXMAG00000004625srl9075.847Xiphophorus_maculatus
ENSORLG00020018173SRL9886.551ENSXMAG00000027598SRL6386.768Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us