EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020018221 (Gene tree)
Gene ID: -
Gene Symbol: tsen54
Alias: -
Full Name: TSEN54 tRNA splicing endonuclease subunit
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 9616 bases
Position: chr8:831834-841449
Accession: ZDB-GENE-050522-454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020017207	tRNA_int_end_N2	PF12928.7	6.4e-18	1	1
ENSORLP00020017201	tRNA_int_end_N2	PF12928.7	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020034213	-	4649	-	ENSORLP00020017201	440 (aa)	-	-
ENSORLT00020025678	-	4808	-	ENSORLP00020017207	493 (aa)	-	-

Gene Model

Click here to download ENSORLG00020018221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020018221's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020018221	tsen54	98	44.847	ENSG00000182173	TSEN54	100	63.889	Homo_sapiens
ENSORLG00020018221	tsen54	100	65.166	ENSAPOG00000009659	tsen54	98	65.949	Acanthochromis_polyacanthus
ENSORLG00020018221	tsen54	96	43.665	ENSAMEG00000009414	TSEN54	96	44.314	Ailuropoda_melanoleuca
ENSORLG00020018221	tsen54	100	67.123	ENSAOCG00000000152	tsen54	98	67.123	Amphiprion_ocellaris
ENSORLG00020018221	tsen54	100	65.949	ENSAPEG00000018931	tsen54	98	66.145	Amphiprion_percula
ENSORLG00020018221	tsen54	100	60.338	ENSATEG00000019860	tsen54	100	60.338	Anabas_testudineus
ENSORLG00020018221	tsen54	96	43.384	ENSAPLG00000009419	TSEN54	99	44.201	Anas_platyrhynchos
ENSORLG00020018221	tsen54	97	47.368	ENSACAG00000006714	TSEN54	98	47.368	Anolis_carolinensis
ENSORLG00020018221	tsen54	98	45.038	ENSANAG00000024061	TSEN54	98	46.422	Aotus_nancymaae
ENSORLG00020018221	tsen54	100	65.497	ENSACLG00000019800	tsen54	100	65.437	Astatotilapia_calliptera
ENSORLG00020018221	tsen54	97	56.275	ENSAMXG00000006546	tsen54	98	56.175	Astyanax_mexicanus
ENSORLG00020018221	tsen54	97	43.907	ENSBTAG00000000824	TSEN54	97	44.660	Bos_taurus
ENSORLG00020018221	tsen54	98	46.154	ENSCJAG00000014278	TSEN54	98	46.154	Callithrix_jacchus
ENSORLG00020018221	tsen54	97	43.916	ENSCAFG00000004798	TSEN54	97	45.543	Canis_familiaris
ENSORLG00020018221	tsen54	97	43.916	ENSCAFG00020000312	TSEN54	97	45.543	Canis_lupus_dingo
ENSORLG00020018221	tsen54	97	44.752	ENSCHIG00000019908	TSEN54	97	45.527	Capra_hircus
ENSORLG00020018221	tsen54	95	43.450	ENSTSYG00000037439	TSEN54	99	44.371	Carlito_syrichta
ENSORLG00020018221	tsen54	98	45.577	ENSCCAG00000036624	TSEN54	98	45.841	Cebus_capucinus
ENSORLG00020018221	tsen54	97	46.380	ENSCATG00000042877	TSEN54	98	45.769	Cercocebus_atys
ENSORLG00020018221	tsen54	97	45.117	ENSCLAG00000002924	TSEN54	96	44.970	Chinchilla_lanigera
ENSORLG00020018221	tsen54	98	45.038	ENSCSAG00000004809	TSEN54	98	45.962	Chlorocebus_sabaeus
ENSORLG00020018221	tsen54	97	46.796	ENSCPBG00000028071	TSEN54	98	46.154	Chrysemys_picta_bellii
ENSORLG00020018221	tsen54	98	46.346	ENSCANG00000028053	TSEN54	98	45.962	Colobus_angolensis_palliatus
ENSORLG00020018221	tsen54	97	44.902	ENSCGRG00001020029	Tsen54	97	44.902	Cricetulus_griseus_chok1gshd
ENSORLG00020018221	tsen54	93	42.597	ENSCGRG00000016289	Tsen54	99	42.727	Cricetulus_griseus_crigri
ENSORLG00020018221	tsen54	89	53.140	ENSCSEG00000020586	tsen54	99	53.140	Cynoglossus_semilaevis
ENSORLG00020018221	tsen54	89	52.750	ENSDARG00000036844	tsen54	99	53.865	Danio_rerio
ENSORLG00020018221	tsen54	98	44.190	ENSDNOG00000018452	TSEN54	98	45.714	Dasypus_novemcinctus
ENSORLG00020018221	tsen54	97	45.079	ENSDORG00000004073	Tsen54	97	45.079	Dipodomys_ordii
ENSORLG00020018221	tsen54	79	42.675	ENSEBUG00000005203	TSEN54	73	41.358	Eptatretus_burgeri
ENSORLG00020018221	tsen54	98	46.183	ENSEASG00005000579	TSEN54	98	45.298	Equus_asinus_asinus
ENSORLG00020018221	tsen54	98	45.992	ENSECAG00000004924	TSEN54	98	45.298	Equus_caballus
ENSORLG00020018221	tsen54	95	42.670	ENSEEUG00000008467	TSEN54	99	43.326	Erinaceus_europaeus
ENSORLG00020018221	tsen54	99	54.190	ENSELUG00000017703	tsen54	92	54.360	Esox_lucius
ENSORLG00020018221	tsen54	97	44.186	ENSFCAG00000023712	TSEN54	97	44.660	Felis_catus
ENSORLG00020018221	tsen54	95	43.778	ENSFALG00000001119	TSEN54	93	44.378	Ficedula_albicollis
ENSORLG00020018221	tsen54	95	43.764	ENSFDAG00000019090	TSEN54	99	44.321	Fukomys_damarensis
ENSORLG00020018221	tsen54	100	69.841	ENSFHEG00000005470	tsen54	100	69.643	Fundulus_heteroclitus
ENSORLG00020018221	tsen54	96	45.816	ENSGMOG00000013146	tsen54	97	55.495	Gadus_morhua
ENSORLG00020018221	tsen54	96	40.523	ENSGALG00000047163	TSEN54	96	41.734	Gallus_gallus
ENSORLG00020018221	tsen54	100	67.936	ENSGAFG00000005111	tsen54	100	67.936	Gambusia_affinis
ENSORLG00020018221	tsen54	97	61.077	ENSGACG00000014987	tsen54	100	61.031	Gasterosteus_aculeatus
ENSORLG00020018221	tsen54	97	46.360	ENSGAGG00000006825	TSEN54	96	46.552	Gopherus_agassizii
ENSORLG00020018221	tsen54	96	44.747	ENSGGOG00000009417	TSEN54	99	45.686	Gorilla_gorilla
ENSORLG00020018221	tsen54	90	63.499	ENSHBUG00000018296	tsen54	92	63.441	Haplochromis_burtoni
ENSORLG00020018221	tsen54	97	46.214	ENSHGLG00000007979	TSEN54	97	46.471	Heterocephalus_glaber_female
ENSORLG00020018221	tsen54	97	45.243	ENSHGLG00100005497	TSEN54	97	45.490	Heterocephalus_glaber_male
ENSORLG00020018221	tsen54	90	56.127	ENSHCOG00000007481	tsen54	99	56.127	Hippocampus_comes
ENSORLG00020018221	tsen54	98	51.313	ENSIPUG00000000590	tsen54	97	51.111	Ictalurus_punctatus
ENSORLG00020018221	tsen54	97	45.365	ENSSTOG00000012883	TSEN54	97	45.149	Ictidomys_tridecemlineatus
ENSORLG00020018221	tsen54	97	45.079	ENSJJAG00000007365	Tsen54	97	44.882	Jaculus_jaculus
ENSORLG00020018221	tsen54	100	62.830	ENSKMAG00000006944	tsen54	100	62.830	Kryptolebias_marmoratus
ENSORLG00020018221	tsen54	100	60.653	ENSLBEG00000004199	tsen54	100	61.420	Labrus_bergylta
ENSORLG00020018221	tsen54	97	41.006	ENSLACG00000009497	TSEN54	99	39.845	Latimeria_chalumnae
ENSORLG00020018221	tsen54	99	53.208	ENSLOCG00000011191	tsen54	99	53.208	Lepisosteus_oculatus
ENSORLG00020018221	tsen54	95	44.444	ENSLAFG00000011655	TSEN54	92	45.549	Loxodonta_africana
ENSORLG00020018221	tsen54	98	45.038	ENSMFAG00000000712	TSEN54	98	45.962	Macaca_fascicularis
ENSORLG00020018221	tsen54	98	45.038	ENSMNEG00000029199	TSEN54	98	45.962	Macaca_nemestrina
ENSORLG00020018221	tsen54	97	43.011	ENSMLEG00000044168	TSEN54	89	44.035	Mandrillus_leucophaeus
ENSORLG00020018221	tsen54	100	63.386	ENSMAMG00000019773	tsen54	100	63.086	Mastacembelus_armatus
ENSORLG00020018221	tsen54	100	65.302	ENSMZEG00005000884	tsen54	100	65.243	Maylandia_zebra
ENSORLG00020018221	tsen54	95	41.009	ENSMGAG00000009556	TSEN54	93	43.117	Meleagris_gallopavo
ENSORLG00020018221	tsen54	99	44.530	ENSMAUG00000016838	Tsen54	99	44.338	Mesocricetus_auratus
ENSORLG00020018221	tsen54	97	46.774	ENSMICG00000044012	TSEN54	96	47.379	Microcebus_murinus
ENSORLG00020018221	tsen54	97	45.652	ENSMOCG00000021585	Tsen54	97	45.652	Microtus_ochrogaster
ENSORLG00020018221	tsen54	96	60.656	ENSMMOG00000020189	tsen54	99	61.475	Mola_mola
ENSORLG00020018221	tsen54	97	44.656	ENSMODG00000007438	TSEN54	95	43.570	Monodelphis_domestica
ENSORLG00020018221	tsen54	99	65.769	ENSMALG00000020573	tsen54	99	65.577	Monopterus_albus
ENSORLG00020018221	tsen54	97	44.094	MGP_CAROLIEiJ_G0017417	Tsen54	97	44.094	Mus_caroli
ENSORLG00020018221	tsen54	97	44.970	ENSMUSG00000020781	Tsen54	97	44.970	Mus_musculus
ENSORLG00020018221	tsen54	97	44.970	MGP_PahariEiJ_G0018547	Tsen54	97	45.168	Mus_pahari
ENSORLG00020018221	tsen54	97	44.576	MGP_SPRETEiJ_G0018262	Tsen54	97	44.576	Mus_spretus
ENSORLG00020018221	tsen54	98	43.364	ENSMPUG00000013870	TSEN54	98	44.867	Mustela_putorius_furo
ENSORLG00020018221	tsen54	97	44.153	ENSMLUG00000015298	TSEN54	96	46.169	Myotis_lucifugus
ENSORLG00020018221	tsen54	97	46.720	ENSNGAG00000015673	Tsen54	97	46.813	Nannospalax_galili
ENSORLG00020018221	tsen54	96	39.560	ENSMEUG00000011908	TSEN54	99	40.860	Notamacropus_eugenii
ENSORLG00020018221	tsen54	97	44.266	ENSOPRG00000012513	TSEN54	96	44.266	Ochotona_princeps
ENSORLG00020018221	tsen54	100	65.370	ENSONIG00000009543	tsen54	100	65.504	Oreochromis_niloticus
ENSORLG00020018221	tsen54	97	42.664	ENSOCUG00000009875	TSEN54	97	44.250	Oryctolagus_cuniculus
ENSORLG00020018221	tsen54	100	98.580	ENSORLG00000000852	tsen54	100	98.580	Oryzias_latipes
ENSORLG00020018221	tsen54	99	98.361	ENSORLG00015009413	tsen54	100	98.361	Oryzias_latipes_hsok
ENSORLG00020018221	tsen54	100	85.396	ENSOMEG00000014402	tsen54	97	85.396	Oryzias_melastigma
ENSORLG00020018221	tsen54	97	44.685	ENSOGAG00000001442	TSEN54	97	44.158	Otolemur_garnettii
ENSORLG00020018221	tsen54	95	40.220	ENSOARG00000010361	TSEN54	99	41.722	Ovis_aries
ENSORLG00020018221	tsen54	95	43.764	ENSPPAG00000043519	TSEN54	99	45.382	Pan_paniscus
ENSORLG00020018221	tsen54	97	44.574	ENSPPRG00000009162	TSEN54	97	45.049	Panthera_pardus
ENSORLG00020018221	tsen54	96	42.384	ENSPTIG00000019312	TSEN54	96	43.363	Panthera_tigris_altaica
ENSORLG00020018221	tsen54	98	44.762	ENSPTRG00000009646	TSEN54	98	45.681	Pan_troglodytes
ENSORLG00020018221	tsen54	98	46.000	ENSPANG00000020133	TSEN54	98	45.769	Papio_anubis
ENSORLG00020018221	tsen54	98	52.886	ENSPKIG00000023018	tsen54	99	51.589	Paramormyrops_kingsleyae
ENSORLG00020018221	tsen54	89	43.619	ENSPSIG00000012807	TSEN54	99	43.619	Pelodiscus_sinensis
ENSORLG00020018221	tsen54	96	45.012	ENSPMGG00000019578	tsen54	100	47.548	Periophthalmus_magnuspinnatus
ENSORLG00020018221	tsen54	97	44.727	ENSPEMG00000014857	Tsen54	97	44.862	Peromyscus_maniculatus_bairdii
ENSORLG00020018221	tsen54	100	67.396	ENSPFOG00000022740	tsen54	100	67.396	Poecilia_formosa
ENSORLG00020018221	tsen54	100	67.335	ENSPLAG00000014847	tsen54	100	67.335	Poecilia_latipinna
ENSORLG00020018221	tsen54	100	67.134	ENSPMEG00000022876	tsen54	100	67.134	Poecilia_mexicana
ENSORLG00020018221	tsen54	100	66.398	ENSPREG00000013090	tsen54	100	66.533	Poecilia_reticulata
ENSORLG00020018221	tsen54	95	44.213	ENSPPYG00000008629	TSEN54	99	44.227	Pongo_abelii
ENSORLG00020018221	tsen54	92	41.408	ENSPCAG00000002093	TSEN54	96	41.564	Procavia_capensis
ENSORLG00020018221	tsen54	97	45.276	ENSPCOG00000027880	TSEN54	97	45.490	Propithecus_coquereli
ENSORLG00020018221	tsen54	97	44.358	ENSPVAG00000008446	TSEN54	97	44.358	Pteropus_vampyrus
ENSORLG00020018221	tsen54	96	63.087	ENSPNYG00000010217	tsen54	100	64.754	Pundamilia_nyererei
ENSORLG00020018221	tsen54	99	55.361	ENSPNAG00000003770	tsen54	98	55.361	Pygocentrus_nattereri
ENSORLG00020018221	tsen54	97	45.562	ENSRNOG00000004598	Tsen54	97	45.365	Rattus_norvegicus
ENSORLG00020018221	tsen54	98	46.154	ENSRBIG00000043040	TSEN54	98	45.769	Rhinopithecus_bieti
ENSORLG00020018221	tsen54	98	46.154	ENSRROG00000030797	TSEN54	98	45.769	Rhinopithecus_roxellana
ENSORLG00020018221	tsen54	98	42.667	ENSSBOG00000013543	TSEN54	97	44.015	Saimiri_boliviensis_boliviensis
ENSORLG00020018221	tsen54	97	45.106	ENSSHAG00000018127	TSEN54	96	44.595	Sarcophilus_harrisii
ENSORLG00020018221	tsen54	89	52.257	ENSSFOG00015004093	tsen54	99	52.719	Scleropages_formosus
ENSORLG00020018221	tsen54	97	61.252	ENSSMAG00000012449	tsen54	98	60.624	Scophthalmus_maximus
ENSORLG00020018221	tsen54	100	65.643	ENSSDUG00000021506	tsen54	100	65.067	Seriola_dumerili
ENSORLG00020018221	tsen54	100	65.643	ENSSLDG00000016303	tsen54	100	65.067	Seriola_lalandi_dorsalis
ENSORLG00020018221	tsen54	79	43.124	ENSSPUG00000008988	TSEN54	96	42.623	Sphenodon_punctatus
ENSORLG00020018221	tsen54	90	58.495	ENSSPAG00000008047	tsen54	99	58.765	Stegastes_partitus
ENSORLG00020018221	tsen54	96	62.727	ENSSPAG00000008098	-	100	63.598	Stegastes_partitus
ENSORLG00020018221	tsen54	97	45.988	ENSSSCG00000036852	TSEN54	97	45.988	Sus_scrofa
ENSORLG00020018221	tsen54	96	44.176	ENSTGUG00000008548	TSEN54	99	43.584	Taeniopygia_guttata
ENSORLG00020018221	tsen54	100	62.851	ENSTRUG00000004230	tsen54	100	62.851	Takifugu_rubripes
ENSORLG00020018221	tsen54	97	61.943	ENSTNIG00000011281	tsen54	98	63.083	Tetraodon_nigroviridis
ENSORLG00020018221	tsen54	95	42.857	ENSTTRG00000015828	TSEN54	99	43.421	Tursiops_truncatus
ENSORLG00020018221	tsen54	89	41.315	ENSUAMG00000010045	TSEN54	90	56.863	Ursus_americanus
ENSORLG00020018221	tsen54	93	41.518	ENSUMAG00000008979	TSEN54	99	41.950	Ursus_maritimus
ENSORLG00020018221	tsen54	97	44.208	ENSVVUG00000011411	TSEN54	98	44.874	Vulpes_vulpes
ENSORLG00020018221	tsen54	97	46.215	ENSXETG00000012532	tsen54	100	63.333	Xenopus_tropicalis
ENSORLG00020018221	tsen54	97	60.455	ENSXCOG00000018245	tsen54	99	62.408	Xiphophorus_couchianus
ENSORLG00020018221	tsen54	100	67.535	ENSXMAG00000018818	tsen54	100	67.535	Xiphophorus_maculatus