EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020018228 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpc
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 13057 bases
Position: chr18:19358657-19371713
Accession: ZDB-GENE-040426-2043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020017187	RRM_1	PF00076.22	2.8e-12	1	1
ENSORLP00020017210	RRM_1	PF00076.22	2.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020034215	-	2439	-	ENSORLP00020017210	307 (aa)	-	-
ENSORLT00020034207	-	2405	-	ENSORLP00020017187	307 (aa)	-	-

Gene Model

Click here to download ENSORLG00020018228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020018228's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020018228	hnrnpc	68	53.097	ENSORLG00020000082	-	75	51.339
ENSORLG00020018228	hnrnpc	83	49.638	ENSORLG00020004438	-	89	50.370

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020018228	hnrnpc	72	53.304	ENSG00000184672	RALYL	91	77.922	Homo_sapiens
ENSORLG00020018228	hnrnpc	93	79.225	ENSAPOG00000006963	hnrnpc	100	78.571	Acanthochromis_polyacanthus
ENSORLG00020018228	hnrnpc	83	81.961	ENSACIG00000000270	-	99	78.231	Amphilophus_citrinellus
ENSORLG00020018228	hnrnpc	83	70.270	ENSACIG00000016568	-	90	67.871	Amphilophus_citrinellus
ENSORLG00020018228	hnrnpc	82	70.980	ENSAOCG00000021616	-	78	73.725	Amphiprion_ocellaris
ENSORLG00020018228	hnrnpc	93	78.873	ENSAOCG00000003896	-	100	78.247	Amphiprion_ocellaris
ENSORLG00020018228	hnrnpc	83	71.042	ENSAPEG00000019962	-	81	73.333	Amphiprion_percula
ENSORLG00020018228	hnrnpc	93	78.873	ENSAPEG00000001489	-	100	78.247	Amphiprion_percula
ENSORLG00020018228	hnrnpc	85	70.522	ENSATEG00000018006	-	78	76.526	Anabas_testudineus
ENSORLG00020018228	hnrnpc	100	79.612	ENSATEG00000011734	-	100	77.346	Anabas_testudineus
ENSORLG00020018228	hnrnpc	84	44.912	ENSAPLG00000015574	RALYL	79	48.729	Anas_platyrhynchos
ENSORLG00020018228	hnrnpc	72	48.333	ENSACAG00000028464	RALYL	78	49.153	Anolis_carolinensis
ENSORLG00020018228	hnrnpc	86	48.529	ENSANAG00000023383	RALYL	78	52.915	Aotus_nancymaae
ENSORLG00020018228	hnrnpc	93	68.276	ENSACLG00000005707	-	86	72.941	Astatotilapia_calliptera
ENSORLG00020018228	hnrnpc	100	75.000	ENSACLG00000000995	-	100	75.974	Astatotilapia_calliptera
ENSORLG00020018228	hnrnpc	100	74.675	ENSACLG00000013636	-	92	75.649	Astatotilapia_calliptera
ENSORLG00020018228	hnrnpc	85	69.349	ENSAMXG00000034915	zgc:55733	86	69.600	Astyanax_mexicanus
ENSORLG00020018228	hnrnpc	68	64.929	ENSAMXG00000042946	hnrnpc	97	67.876	Astyanax_mexicanus
ENSORLG00020018228	hnrnpc	86	48.162	ENSCJAG00000000402	RALYL	78	52.466	Callithrix_jacchus
ENSORLG00020018228	hnrnpc	72	48.536	ENSCPOG00000012314	RALYL	78	49.787	Cavia_porcellus
ENSORLG00020018228	hnrnpc	86	48.897	ENSCCAG00000025003	RALYL	75	77.922	Cebus_capucinus
ENSORLG00020018228	hnrnpc	72	53.304	ENSCATG00000042145	RALYL	78	52.466	Cercocebus_atys
ENSORLG00020018228	hnrnpc	72	48.536	ENSCLAG00000005228	RALYL	78	49.787	Chinchilla_lanigera
ENSORLG00020018228	hnrnpc	68	50.870	ENSCHOG00000013228	RALYL	74	47.639	Choloepus_hoffmanni
ENSORLG00020018228	hnrnpc	72	53.304	ENSCANG00000039144	RALYL	78	52.466	Colobus_angolensis_palliatus
ENSORLG00020018228	hnrnpc	72	49.583	ENSCGRG00001009241	Ralyl	78	50.000	Cricetulus_griseus_chok1gshd
ENSORLG00020018228	hnrnpc	68	73.460	ENSCSEG00000019769	-	70	73.913	Cynoglossus_semilaevis
ENSORLG00020018228	hnrnpc	78	68.050	ENSCSEG00000021349	-	78	67.451	Cynoglossus_semilaevis
ENSORLG00020018228	hnrnpc	82	73.438	ENSCVAG00000016981	-	77	71.875	Cyprinodon_variegatus
ENSORLG00020018228	hnrnpc	96	69.024	ENSCVAG00000002797	-	98	67.577	Cyprinodon_variegatus
ENSORLG00020018228	hnrnpc	85	69.349	ENSDARG00000103845	zgc:55733	90	69.600	Danio_rerio
ENSORLG00020018228	hnrnpc	78	70.902	ENSDARG00000053810	hnrnpc	78	70.079	Danio_rerio
ENSORLG00020018228	hnrnpc	72	49.583	ENSDORG00000003721	Ralyl	78	50.000	Dipodomys_ordii
ENSORLG00020018228	hnrnpc	53	53.409	ENSETEG00000014028	RALYL	80	57.862	Echinops_telfairi
ENSORLG00020018228	hnrnpc	69	46.903	ENSEBUG00000012363	hnrnpc	65	46.875	Eptatretus_burgeri
ENSORLG00020018228	hnrnpc	73	51.739	ENSEBUG00000006049	RALYL	89	47.266	Eptatretus_burgeri
ENSORLG00020018228	hnrnpc	72	49.583	ENSEEUG00000007202	RALYL	80	51.064	Erinaceus_europaeus
ENSORLG00020018228	hnrnpc	83	72.374	ENSELUG00000004132	-	87	71.815	Esox_lucius
ENSORLG00020018228	hnrnpc	82	69.403	ENSELUG00000007714	-	88	70.115	Esox_lucius
ENSORLG00020018228	hnrnpc	68	54.839	ENSFALG00000008647	RALYL	96	53.991	Ficedula_albicollis
ENSORLG00020018228	hnrnpc	93	77.193	ENSFHEG00000003605	-	93	76.491	Fundulus_heteroclitus
ENSORLG00020018228	hnrnpc	83	68.864	ENSFHEG00000007278	-	98	63.497	Fundulus_heteroclitus
ENSORLG00020018228	hnrnpc	72	51.092	ENSGALG00000036938	RALYL	78	48.729	Gallus_gallus
ENSORLG00020018228	hnrnpc	83	70.270	ENSGAFG00000020992	-	82	72.157	Gambusia_affinis
ENSORLG00020018228	hnrnpc	100	75.649	ENSGAFG00000020486	-	100	76.623	Gambusia_affinis
ENSORLG00020018228	hnrnpc	87	71.587	ENSGACG00000017772	-	96	74.206	Gasterosteus_aculeatus
ENSORLG00020018228	hnrnpc	71	65.315	ENSGACG00000018932	-	85	66.038	Gasterosteus_aculeatus
ENSORLG00020018228	hnrnpc	72	53.304	ENSGGOG00000000841	RALYL	78	52.466	Gorilla_gorilla
ENSORLG00020018228	hnrnpc	100	75.325	ENSHBUG00000018342	-	100	76.299	Haplochromis_burtoni
ENSORLG00020018228	hnrnpc	85	69.030	ENSHBUG00000010527	-	79	71.984	Haplochromis_burtoni
ENSORLG00020018228	hnrnpc	72	48.117	ENSHGLG00000004866	RALYL	78	49.362	Heterocephalus_glaber_female
ENSORLG00020018228	hnrnpc	72	48.117	ENSHGLG00100017480	RALYL	78	49.362	Heterocephalus_glaber_male
ENSORLG00020018228	hnrnpc	84	67.766	ENSHCOG00000012333	hnrnpc	86	68.165	Hippocampus_comes
ENSORLG00020018228	hnrnpc	85	70.498	ENSIPUG00000008666	zgc:55733	92	74.766	Ictalurus_punctatus
ENSORLG00020018228	hnrnpc	83	69.531	ENSIPUG00000011271	hnrnpc	97	71.239	Ictalurus_punctatus
ENSORLG00020018228	hnrnpc	72	49.167	ENSSTOG00000012583	RALYL	80	49.576	Ictidomys_tridecemlineatus
ENSORLG00020018228	hnrnpc	82	69.412	ENSKMAG00000018265	-	78	72.549	Kryptolebias_marmoratus
ENSORLG00020018228	hnrnpc	92	78.723	ENSKMAG00000011170	-	91	77.817	Kryptolebias_marmoratus
ENSORLG00020018228	hnrnpc	87	74.532	ENSLBEG00000006979	-	85	74.899	Labrus_bergylta
ENSORLG00020018228	hnrnpc	89	70.714	ENSLBEG00000024418	-	84	71.765	Labrus_bergylta
ENSORLG00020018228	hnrnpc	85	70.076	ENSLBEG00000006193	-	79	72.549	Labrus_bergylta
ENSORLG00020018228	hnrnpc	83	61.069	ENSLOCG00000002560	hnrnpc	93	62.681	Lepisosteus_oculatus
ENSORLG00020018228	hnrnpc	72	53.304	ENSMNEG00000033288	RALYL	78	52.466	Macaca_nemestrina
ENSORLG00020018228	hnrnpc	72	53.304	ENSMLEG00000038284	RALYL	78	52.466	Mandrillus_leucophaeus
ENSORLG00020018228	hnrnpc	85	70.149	ENSMAMG00000008033	-	88	72.763	Mastacembelus_armatus
ENSORLG00020018228	hnrnpc	82	80.876	ENSMAMG00000012236	-	92	78.596	Mastacembelus_armatus
ENSORLG00020018228	hnrnpc	100	75.000	ENSMZEG00005020460	-	100	75.974	Maylandia_zebra
ENSORLG00020018228	hnrnpc	92	68.421	ENSMZEG00005024249	-	80	72.941	Maylandia_zebra
ENSORLG00020018228	hnrnpc	72	49.583	ENSMAUG00000015149	Ralyl	78	50.000	Mesocricetus_auratus
ENSORLG00020018228	hnrnpc	72	51.754	ENSMICG00000005558	RALYL	78	76.623	Microcebus_murinus
ENSORLG00020018228	hnrnpc	72	49.583	ENSMOCG00000017371	Ralyl	78	50.000	Microtus_ochrogaster
ENSORLG00020018228	hnrnpc	81	74.900	ENSMMOG00000019520	-	84	74.803	Mola_mola
ENSORLG00020018228	hnrnpc	86	75.000	ENSMMOG00000021465	-	88	77.778	Mola_mola
ENSORLG00020018228	hnrnpc	96	68.136	ENSMALG00000007520	-	98	69.072	Monopterus_albus
ENSORLG00020018228	hnrnpc	85	71.970	ENSMALG00000014623	-	79	71.765	Monopterus_albus
ENSORLG00020018228	hnrnpc	72	49.167	ENSMUSG00000039717	Ralyl	91	76.623	Mus_musculus
ENSORLG00020018228	hnrnpc	72	50.000	ENSMPUG00000010724	RALYL	78	48.729	Mustela_putorius_furo
ENSORLG00020018228	hnrnpc	72	49.583	ENSNGAG00000013375	Ralyl	78	50.000	Nannospalax_galili
ENSORLG00020018228	hnrnpc	97	77.333	ENSNBRG00000004912	-	97	76.271	Neolamprologus_brichardi
ENSORLG00020018228	hnrnpc	85	69.030	ENSNBRG00000015676	-	79	71.984	Neolamprologus_brichardi
ENSORLG00020018228	hnrnpc	72	53.304	ENSNLEG00000002702	RALYL	74	52.466	Nomascus_leucogenys
ENSORLG00020018228	hnrnpc	58	46.970	ENSOPRG00000013650	-	98	44.059	Ochotona_princeps
ENSORLG00020018228	hnrnpc	72	49.791	ENSODEG00000001012	RALYL	78	50.213	Octodon_degus
ENSORLG00020018228	hnrnpc	85	69.030	ENSONIG00000018350	-	79	71.984	Oreochromis_niloticus
ENSORLG00020018228	hnrnpc	86	78.868	ENSONIG00000007859	-	94	77.536	Oreochromis_niloticus
ENSORLG00020018228	hnrnpc	82	69.582	ENSORLG00000003144	-	78	71.863	Oryzias_latipes
ENSORLG00020018228	hnrnpc	100	99.674	ENSORLG00000009999	-	100	99.674	Oryzias_latipes
ENSORLG00020018228	hnrnpc	82	69.582	ENSORLG00015009460	-	78	71.863	Oryzias_latipes_hsok
ENSORLG00020018228	hnrnpc	100	99.674	ENSORLG00015019755	-	100	99.674	Oryzias_latipes_hsok
ENSORLG00020018228	hnrnpc	82	71.484	ENSOMEG00000022665	-	79	73.828	Oryzias_melastigma
ENSORLG00020018228	hnrnpc	100	97.078	ENSOMEG00000020488	-	100	97.078	Oryzias_melastigma
ENSORLG00020018228	hnrnpc	72	53.304	ENSPPAG00000038705	RALYL	78	52.466	Pan_paniscus
ENSORLG00020018228	hnrnpc	72	52.838	ENSPPRG00000018612	RALYL	78	51.556	Panthera_pardus
ENSORLG00020018228	hnrnpc	72	52.838	ENSPTIG00000020331	RALYL	78	51.556	Panthera_tigris_altaica
ENSORLG00020018228	hnrnpc	72	53.304	ENSPTRG00000020381	RALYL	78	52.466	Pan_troglodytes
ENSORLG00020018228	hnrnpc	72	53.304	ENSPANG00000029305	RALYL	78	52.466	Papio_anubis
ENSORLG00020018228	hnrnpc	87	68.978	ENSPKIG00000022837	-	81	72.587	Paramormyrops_kingsleyae
ENSORLG00020018228	hnrnpc	91	67.820	ENSPKIG00000008592	-	87	69.176	Paramormyrops_kingsleyae
ENSORLG00020018228	hnrnpc	72	48.333	ENSPSIG00000011135	RALYL	78	48.729	Pelodiscus_sinensis
ENSORLG00020018228	hnrnpc	67	74.272	ENSPMGG00000017774	-	86	65.700	Periophthalmus_magnuspinnatus
ENSORLG00020018228	hnrnpc	70	78.241	ENSPMGG00000013144	-	80	76.887	Periophthalmus_magnuspinnatus
ENSORLG00020018228	hnrnpc	72	49.583	ENSPEMG00000016447	Ralyl	78	50.000	Peromyscus_maniculatus_bairdii
ENSORLG00020018228	hnrnpc	68	53.247	ENSPMAG00000002407	RALYL	96	53.778	Petromyzon_marinus
ENSORLG00020018228	hnrnpc	95	61.812	ENSPFOG00000002643	-	80	71.429	Poecilia_formosa
ENSORLG00020018228	hnrnpc	100	75.728	ENSPFOG00000001583	-	100	76.375	Poecilia_formosa
ENSORLG00020018228	hnrnpc	100	75.325	ENSPLAG00000015305	-	100	75.974	Poecilia_latipinna
ENSORLG00020018228	hnrnpc	82	70.588	ENSPLAG00000000061	-	78	72.549	Poecilia_latipinna
ENSORLG00020018228	hnrnpc	100	75.974	ENSPMEG00000004802	-	100	76.299	Poecilia_mexicana
ENSORLG00020018228	hnrnpc	82	70.588	ENSPMEG00000016524	-	78	72.157	Poecilia_mexicana
ENSORLG00020018228	hnrnpc	93	78.246	ENSPREG00000007928	-	93	77.895	Poecilia_reticulata
ENSORLG00020018228	hnrnpc	82	70.980	ENSPREG00000001852	-	84	72.941	Poecilia_reticulata
ENSORLG00020018228	hnrnpc	72	49.372	ENSPVAG00000010821	RALYL	78	50.213	Pteropus_vampyrus
ENSORLG00020018228	hnrnpc	93	68.276	ENSPNYG00000003747	-	85	71.984	Pundamilia_nyererei
ENSORLG00020018228	hnrnpc	83	78.210	ENSPNYG00000020293	-	86	78.571	Pundamilia_nyererei
ENSORLG00020018228	hnrnpc	79	68.852	ENSPNAG00000015686	hnrnpc	84	70.751	Pygocentrus_nattereri
ENSORLG00020018228	hnrnpc	86	66.909	ENSPNAG00000019200	zgc:55733	81	68.846	Pygocentrus_nattereri
ENSORLG00020018228	hnrnpc	72	53.304	ENSRROG00000023925	RALYL	80	75.949	Rhinopithecus_roxellana
ENSORLG00020018228	hnrnpc	83	66.031	ENSSFOG00015012015	-	82	73.832	Scleropages_formosus
ENSORLG00020018228	hnrnpc	83	68.939	ENSSFOG00015012924	-	78	88.312	Scleropages_formosus
ENSORLG00020018228	hnrnpc	87	78.195	ENSSMAG00000013592	-	84	77.820	Scophthalmus_maximus
ENSORLG00020018228	hnrnpc	96	59.596	ENSSMAG00000011147	-	78	74.299	Scophthalmus_maximus
ENSORLG00020018228	hnrnpc	85	73.208	ENSSDUG00000006730	-	80	72.441	Seriola_dumerili
ENSORLG00020018228	hnrnpc	100	78.896	ENSSDUG00000001723	-	100	78.571	Seriola_dumerili
ENSORLG00020018228	hnrnpc	91	79.570	ENSSLDG00000007454	-	87	80.075	Seriola_lalandi_dorsalis
ENSORLG00020018228	hnrnpc	85	73.208	ENSSLDG00000007474	-	87	73.725	Seriola_lalandi_dorsalis
ENSORLG00020018228	hnrnpc	85	71.053	ENSSPAG00000013996	-	79	73.725	Stegastes_partitus
ENSORLG00020018228	hnrnpc	92	80.427	ENSSPAG00000023204	-	100	79.545	Stegastes_partitus
ENSORLG00020018228	hnrnpc	71	48.936	ENSTGUG00000011689	RALYL	78	49.351	Taeniopygia_guttata
ENSORLG00020018228	hnrnpc	83	76.078	ENSTRUG00000020158	-	82	74.502	Takifugu_rubripes
ENSORLG00020018228	hnrnpc	93	65.625	ENSTNIG00000000334	-	93	68.110	Tetraodon_nigroviridis
ENSORLG00020018228	hnrnpc	83	72.031	ENSTNIG00000007427	-	83	71.595	Tetraodon_nigroviridis
ENSORLG00020018228	hnrnpc	71	44.872	ENSTBEG00000005551	RALYL	88	45.415	Tupaia_belangeri
ENSORLG00020018228	hnrnpc	72	49.362	ENSTTRG00000015762	RALYL	78	50.215	Tursiops_truncatus
ENSORLG00020018228	hnrnpc	72	46.781	ENSVPAG00000008501	RALYL	78	47.345	Vicugna_pacos
ENSORLG00020018228	hnrnpc	51	78.182	ENSXCOG00000019434	-	91	65.438	Xiphophorus_couchianus
ENSORLG00020018228	hnrnpc	89	73.091	ENSXCOG00000006552	-	81	72.727	Xiphophorus_couchianus
ENSORLG00020018228	hnrnpc	82	69.804	ENSXMAG00000022849	-	82	71.765	Xiphophorus_maculatus
ENSORLG00020018228	hnrnpc	100	76.299	ENSXMAG00000009333	-	100	76.623	Xiphophorus_maculatus