EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020018387 (Gene tree)
Gene ID: -
Gene Symbol: ern1
Alias: -
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 16456 bases
Position: chr8:11631877-11648332
Accession: ZDB-GENE-050522-431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020017322	Ribonuc_2-5A	PF06479.12	3.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020025834	-	5356	-	ENSORLP00020017322	1071 (aa)	-	-

Gene Model

Click here to download ENSORLG00020018387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020018387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020018387	ern1	87	55.983	ENSORLG00020012672	ern2	99	55.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020018387	ern1	99	85.075	ENSAPOG00000009999	ern1	98	85.075	Acanthochromis_polyacanthus
ENSORLG00020018387	ern1	99	86.090	ENSACIG00000021716	ern1	97	86.090	Amphilophus_citrinellus
ENSORLG00020018387	ern1	99	86.127	ENSAOCG00000012309	ern1	98	86.127	Amphiprion_ocellaris
ENSORLG00020018387	ern1	99	85.754	ENSAPEG00000011263	ern1	98	91.568	Amphiprion_percula
ENSORLG00020018387	ern1	100	85.449	ENSATEG00000024468	ern1	98	85.449	Anabas_testudineus
ENSORLG00020018387	ern1	99	86.216	ENSACLG00000027919	ern1	99	86.216	Astatotilapia_calliptera
ENSORLG00020018387	ern1	90	83.488	ENSAMXG00000000944	ern1	93	83.488	Astyanax_mexicanus
ENSORLG00020018387	ern1	95	85.019	ENSCSEG00000014500	ern1	99	84.795	Cynoglossus_semilaevis
ENSORLG00020018387	ern1	94	86.837	ENSCVAG00000002988	ern1	96	87.119	Cyprinodon_variegatus
ENSORLG00020018387	ern1	90	80.928	ENSDARG00000013997	ern1	100	81.205	Danio_rerio
ENSORLG00020018387	ern1	90	79.692	ENSELUG00000005957	ern1	93	79.897	Esox_lucius
ENSORLG00020018387	ern1	99	82.993	ENSFHEG00000005578	ern1	99	82.500	Fundulus_heteroclitus
ENSORLG00020018387	ern1	87	84.681	ENSGMOG00000011232	ern1	100	84.681	Gadus_morhua
ENSORLG00020018387	ern1	100	84.358	ENSGAFG00000020231	ern1	99	84.358	Gambusia_affinis
ENSORLG00020018387	ern1	88	87.578	ENSGACG00000011700	ern1	99	87.578	Gasterosteus_aculeatus
ENSORLG00020018387	ern1	97	86.445	ENSHBUG00000012581	ern1	98	86.445	Haplochromis_burtoni
ENSORLG00020018387	ern1	100	80.873	ENSHCOG00000016199	ern1	92	87.605	Hippocampus_comes
ENSORLG00020018387	ern1	91	82.889	ENSIPUG00000011083	ern1	94	82.889	Ictalurus_punctatus
ENSORLG00020018387	ern1	100	83.784	ENSKMAG00000019499	ern1	98	83.784	Kryptolebias_marmoratus
ENSORLG00020018387	ern1	98	82.109	ENSLBEG00000025907	ern1	98	82.109	Labrus_bergylta
ENSORLG00020018387	ern1	100	85.223	ENSMAMG00000023439	ern1	98	85.442	Mastacembelus_armatus
ENSORLG00020018387	ern1	99	86.216	ENSMZEG00005003221	ern1	99	86.216	Maylandia_zebra
ENSORLG00020018387	ern1	91	87.282	ENSMMOG00000007650	ern1	97	87.282	Mola_mola
ENSORLG00020018387	ern1	100	83.581	ENSMALG00000017775	ern1	96	83.581	Monopterus_albus
ENSORLG00020018387	ern1	97	86.282	ENSNBRG00000002179	ern1	98	86.282	Neolamprologus_brichardi
ENSORLG00020018387	ern1	89	89.540	ENSONIG00000017169	ern1	99	89.540	Oreochromis_niloticus
ENSORLG00020018387	ern1	100	98.973	ENSORLG00000008940	ern1	100	98.973	Oryzias_latipes
ENSORLG00020018387	ern1	100	98.880	ENSORLG00015007946	ern1	100	98.880	Oryzias_latipes_hsok
ENSORLG00020018387	ern1	100	95.340	ENSOMEG00000011741	ern1	100	95.340	Oryzias_melastigma
ENSORLG00020018387	ern1	89	81.524	ENSPKIG00000005593	ern1	97	81.524	Paramormyrops_kingsleyae
ENSORLG00020018387	ern1	93	86.527	ENSPMGG00000020442	ern1	96	86.432	Periophthalmus_magnuspinnatus
ENSORLG00020018387	ern1	99	85.607	ENSPFOG00000007378	ern1	98	84.738	Poecilia_formosa
ENSORLG00020018387	ern1	100	84.801	ENSPLAG00000014780	ern1	99	83.948	Poecilia_latipinna
ENSORLG00020018387	ern1	100	84.986	ENSPMEG00000016324	ern1	99	84.133	Poecilia_mexicana
ENSORLG00020018387	ern1	100	84.523	ENSPREG00000006286	ern1	99	83.672	Poecilia_reticulata
ENSORLG00020018387	ern1	99	86.309	ENSPNYG00000017929	ern1	98	89.216	Pundamilia_nyererei
ENSORLG00020018387	ern1	93	82.064	ENSPNAG00000029447	ern1	94	83.676	Pygocentrus_nattereri
ENSORLG00020018387	ern1	99	84.480	ENSSMAG00000015042	ern1	98	84.480	Scophthalmus_maximus
ENSORLG00020018387	ern1	100	86.586	ENSSDUG00000009098	ern1	98	86.586	Seriola_dumerili
ENSORLG00020018387	ern1	100	86.309	ENSSLDG00000023254	ern1	98	86.309	Seriola_lalandi_dorsalis
ENSORLG00020018387	ern1	99	85.382	ENSSPAG00000017539	ern1	98	85.382	Stegastes_partitus
ENSORLG00020018387	ern1	92	84.894	ENSTRUG00000001041	ern1	95	84.592	Takifugu_rubripes
ENSORLG00020018387	ern1	87	88.924	ENSTNIG00000017990	ern1	98	88.948	Tetraodon_nigroviridis
ENSORLG00020018387	ern1	91	89.206	ENSXCOG00000010330	ern1	95	89.659	Xiphophorus_couchianus
ENSORLG00020018387	ern1	100	84.104	ENSXMAG00000001310	ern1	99	83.257	Xiphophorus_maculatus