EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020018584 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: -
Full Name: valyl-tRNA synthetase 2%2C mitochondrial (putative)
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 16690 bases
Position: chr11:8128594-8145283
Accession: ZDB-GENE-060503-575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020032849	tRNA-synt_1g	PF09334.11	7.9e-14	1	1
ENSORLP00020032849	Anticodon_1	PF08264.13	3.9e-35	1	1
ENSORLP00020032849	tRNA-synt_1	PF00133.22	1.3e-190	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020026175	-	3522	-	ENSORLP00020032849	1089 (aa)	-	-

Gene Model

Click here to download ENSORLG00020018584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020018584's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020018584	vars2	92	50.198	ENSORLG00020003504	vars	79	49.951

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020018584	vars2	95	75.553	ENSAPOG00000007396	vars2	99	73.665	Acanthochromis_polyacanthus
ENSORLG00020018584	vars2	95	50.992	ENSAMEG00000012997	VARS2	91	51.805	Ailuropoda_melanoleuca
ENSORLG00020018584	vars2	99	72.953	ENSACIG00000004344	vars2	95	75.814	Amphilophus_citrinellus
ENSORLG00020018584	vars2	95	75.457	ENSAOCG00000000476	vars2	99	73.665	Amphiprion_ocellaris
ENSORLG00020018584	vars2	95	75.457	ENSAPEG00000008646	vars2	97	73.665	Amphiprion_percula
ENSORLG00020018584	vars2	96	76.657	ENSATEG00000012291	vars2	94	77.264	Anabas_testudineus
ENSORLG00020018584	vars2	95	52.958	ENSACAG00000022093	VARS2	91	54.320	Anolis_carolinensis
ENSORLG00020018584	vars2	96	51.100	ENSANAG00000038018	VARS2	92	52.075	Aotus_nancymaae
ENSORLG00020018584	vars2	99	72.652	ENSACLG00000018673	vars2	95	74.732	Astatotilapia_calliptera
ENSORLG00020018584	vars2	95	67.466	ENSAMXG00000017773	vars2	92	70.594	Astyanax_mexicanus
ENSORLG00020018584	vars2	97	51.272	ENSBTAG00000010698	VARS2	93	51.996	Bos_taurus
ENSORLG00020018584	vars2	96	51.196	ENSCJAG00000019826	VARS2	92	52.273	Callithrix_jacchus
ENSORLG00020018584	vars2	98	51.253	ENSCAFG00000000454	VARS2	92	52.611	Canis_familiaris
ENSORLG00020018584	vars2	85	56.103	ENSCAFG00020019387	VARS2	89	56.865	Canis_lupus_dingo
ENSORLG00020018584	vars2	97	51.272	ENSCHIG00000007847	VARS2	93	51.996	Capra_hircus
ENSORLG00020018584	vars2	97	51.698	ENSTSYG00000009904	VARS2	92	52.871	Carlito_syrichta
ENSORLG00020018584	vars2	88	52.088	ENSCAPG00000017770	VARS2	99	52.088	Cavia_aperea
ENSORLG00020018584	vars2	99	49.816	ENSCPOG00000021834	VARS2	92	51.724	Cavia_porcellus
ENSORLG00020018584	vars2	96	51.100	ENSCCAG00000037907	VARS2	92	52.174	Cebus_capucinus
ENSORLG00020018584	vars2	96	51.292	ENSCATG00000032554	VARS2	92	52.372	Cercocebus_atys
ENSORLG00020018584	vars2	96	51.287	ENSCLAG00000002889	VARS2	94	51.798	Chinchilla_lanigera
ENSORLG00020018584	vars2	95	51.880	ENSCSAG00000008327	VARS2	91	52.988	Chlorocebus_sabaeus
ENSORLG00020018584	vars2	91	55.343	ENSCPBG00000021502	VARS2	96	55.343	Chrysemys_picta_bellii
ENSORLG00020018584	vars2	96	51.243	ENSCANG00000014991	VARS2	91	52.174	Colobus_angolensis_palliatus
ENSORLG00020018584	vars2	95	52.019	ENSCGRG00001021535	Vars2	92	52.918	Cricetulus_griseus_chok1gshd
ENSORLG00020018584	vars2	95	52.019	ENSCGRG00000014112	Vars2	92	52.918	Cricetulus_griseus_crigri
ENSORLG00020018584	vars2	96	63.755	ENSCSEG00000015432	vars2	86	81.290	Cynoglossus_semilaevis
ENSORLG00020018584	vars2	65	76.056	ENSCVAG00000017765	vars2	98	76.056	Cyprinodon_variegatus
ENSORLG00020018584	vars2	96	66.412	ENSDARG00000056717	vars2	94	67.790	Danio_rerio
ENSORLG00020018584	vars2	80	49.714	ENSDORG00000008516	Vars2	93	49.714	Dipodomys_ordii
ENSORLG00020018584	vars2	95	45.725	ENSETEG00000014844	VARS2	92	46.351	Echinops_telfairi
ENSORLG00020018584	vars2	97	51.084	ENSEASG00005019997	VARS2	94	55.282	Equus_asinus_asinus
ENSORLG00020018584	vars2	97	51.555	ENSECAG00000018202	VARS2	92	52.819	Equus_caballus
ENSORLG00020018584	vars2	99	66.484	ENSELUG00000017824	vars2	99	66.484	Esox_lucius
ENSORLG00020018584	vars2	96	51.265	ENSFCAG00000010531	VARS2	92	52.731	Felis_catus
ENSORLG00020018584	vars2	95	51.149	ENSFDAG00000017216	VARS2	92	52.020	Fukomys_damarensis
ENSORLG00020018584	vars2	93	68.442	ENSFHEG00000013932	vars2	98	68.442	Fundulus_heteroclitus
ENSORLG00020018584	vars2	90	67.211	ENSGMOG00000018960	vars2	99	67.211	Gadus_morhua
ENSORLG00020018584	vars2	93	73.455	ENSGAFG00000004737	vars2	92	73.455	Gambusia_affinis
ENSORLG00020018584	vars2	93	73.340	ENSGACG00000001464	vars2	99	73.340	Gasterosteus_aculeatus
ENSORLG00020018584	vars2	91	55.533	ENSGAGG00000011652	VARS2	99	55.533	Gopherus_agassizii
ENSORLG00020018584	vars2	96	51.196	ENSGGOG00000014587	VARS2	92	52.174	Gorilla_gorilla
ENSORLG00020018584	vars2	99	70.138	ENSHBUG00000002448	vars2	94	74.695	Haplochromis_burtoni
ENSORLG00020018584	vars2	96	51.770	ENSHGLG00000012886	VARS2	90	52.187	Heterocephalus_glaber_female
ENSORLG00020018584	vars2	96	51.675	ENSHGLG00100016535	VARS2	94	52.089	Heterocephalus_glaber_male
ENSORLG00020018584	vars2	67	73.061	ENSHCOG00000017907	vars2	97	73.061	Hippocampus_comes
ENSORLG00020018584	vars2	92	68.385	ENSIPUG00000015573	Vars2	93	68.385	Ictalurus_punctatus
ENSORLG00020018584	vars2	96	50.907	ENSSTOG00000009924	VARS2	94	51.506	Ictidomys_tridecemlineatus
ENSORLG00020018584	vars2	97	51.737	ENSJJAG00000011144	Vars2	94	52.872	Jaculus_jaculus
ENSORLG00020018584	vars2	99	72.777	ENSKMAG00000001393	vars2	99	73.144	Kryptolebias_marmoratus
ENSORLG00020018584	vars2	99	70.814	ENSLBEG00000011949	vars2	99	70.814	Labrus_bergylta
ENSORLG00020018584	vars2	51	78.261	ENSLBEG00000005480	-	81	78.261	Labrus_bergylta
ENSORLG00020018584	vars2	95	50.758	ENSLACG00000001576	-	97	51.107	Latimeria_chalumnae
ENSORLG00020018584	vars2	97	51.558	ENSLAFG00000015183	VARS2	93	52.246	Loxodonta_africana
ENSORLG00020018584	vars2	96	51.530	ENSMFAG00000042367	VARS2	92	52.470	Macaca_fascicularis
ENSORLG00020018584	vars2	96	51.483	ENSMMUG00000018609	VARS2	92	52.668	Macaca_mulatta
ENSORLG00020018584	vars2	96	51.434	ENSMNEG00000043163	VARS2	92	52.372	Macaca_nemestrina
ENSORLG00020018584	vars2	96	51.388	ENSMLEG00000041728	VARS2	89	52.470	Mandrillus_leucophaeus
ENSORLG00020018584	vars2	95	74.110	ENSMAMG00000020339	vars2	94	74.631	Mastacembelus_armatus
ENSORLG00020018584	vars2	99	72.560	ENSMZEG00005017669	vars2	95	74.634	Maylandia_zebra
ENSORLG00020018584	vars2	97	52.150	ENSMAUG00000018946	Vars2	93	52.981	Mesocricetus_auratus
ENSORLG00020018584	vars2	80	56.357	ENSMICG00000005365	VARS2	94	57.444	Microcebus_murinus
ENSORLG00020018584	vars2	89	57.375	ENSMOCG00000014607	Vars2	92	59.363	Microtus_ochrogaster
ENSORLG00020018584	vars2	93	73.425	ENSMMOG00000012122	vars2	94	73.425	Mola_mola
ENSORLG00020018584	vars2	93	51.412	ENSMODG00000015848	VARS2	92	51.415	Monodelphis_domestica
ENSORLG00020018584	vars2	93	73.617	ENSMALG00000009217	vars2	99	73.617	Monopterus_albus
ENSORLG00020018584	vars2	96	51.338	MGP_CAROLIEiJ_G0021529	Vars2	97	54.922	Mus_caroli
ENSORLG00020018584	vars2	96	51.052	ENSMUSG00000038838	Vars2	98	54.545	Mus_musculus
ENSORLG00020018584	vars2	97	50.752	MGP_PahariEiJ_G0020523	Vars2	96	54.688	Mus_pahari
ENSORLG00020018584	vars2	96	51.338	MGP_SPRETEiJ_G0022436	Vars2	97	54.750	Mus_spretus
ENSORLG00020018584	vars2	94	51.820	ENSMPUG00000011643	VARS2	92	52.976	Mustela_putorius_furo
ENSORLG00020018584	vars2	95	50.936	ENSMLUG00000002356	VARS2	87	53.078	Myotis_lucifugus
ENSORLG00020018584	vars2	96	47.314	ENSNGAG00000020607	Vars2	91	48.802	Nannospalax_galili
ENSORLG00020018584	vars2	62	66.480	ENSNBRG00000001624	vars2	58	66.480	Neolamprologus_brichardi
ENSORLG00020018584	vars2	94	50.726	ENSNLEG00000005625	VARS2	91	51.542	Nomascus_leucogenys
ENSORLG00020018584	vars2	77	56.500	ENSMEUG00000014475	VARS2	89	56.500	Notamacropus_eugenii
ENSORLG00020018584	vars2	87	51.244	ENSOPRG00000000682	VARS2	82	60.526	Ochotona_princeps
ENSORLG00020018584	vars2	97	50.329	ENSODEG00000017965	VARS2	94	51.215	Octodon_degus
ENSORLG00020018584	vars2	93	55.469	ENSONIG00000004734	vars2	99	55.469	Oreochromis_niloticus
ENSORLG00020018584	vars2	73	43.342	ENSOANG00000000398	-	93	43.342	Ornithorhynchus_anatinus
ENSORLG00020018584	vars2	96	48.774	ENSOCUG00000021496	VARS2	60	49.471	Oryctolagus_cuniculus
ENSORLG00020018584	vars2	100	97.612	ENSORLG00000010632	vars2	100	97.612	Oryzias_latipes
ENSORLG00020018584	vars2	100	97.704	ENSORLG00015010408	vars2	100	97.704	Oryzias_latipes_hsok
ENSORLG00020018584	vars2	100	91.460	ENSOMEG00000008360	vars2	100	91.460	Oryzias_melastigma
ENSORLG00020018584	vars2	96	51.659	ENSOGAG00000006087	VARS2	89	52.935	Otolemur_garnettii
ENSORLG00020018584	vars2	97	50.565	ENSOARG00000010844	VARS2	92	51.265	Ovis_aries
ENSORLG00020018584	vars2	96	51.292	ENSPPAG00000041141	VARS2	92	52.174	Pan_paniscus
ENSORLG00020018584	vars2	96	51.169	ENSPPRG00000006751	VARS2	90	52.527	Panthera_pardus
ENSORLG00020018584	vars2	96	51.076	ENSPTIG00000017799	VARS2	97	52.362	Panthera_tigris_altaica
ENSORLG00020018584	vars2	96	51.292	ENSPTRG00000034497	VARS2	92	52.174	Pan_troglodytes
ENSORLG00020018584	vars2	96	51.579	ENSPANG00000018481	VARS2	92	54.060	Papio_anubis
ENSORLG00020018584	vars2	96	65.481	ENSPKIG00000011372	vars2	93	66.568	Paramormyrops_kingsleyae
ENSORLG00020018584	vars2	58	63.365	ENSPSIG00000006206	VARS2	92	63.101	Pelodiscus_sinensis
ENSORLG00020018584	vars2	96	68.642	ENSPMGG00000000465	vars2	94	70.452	Periophthalmus_magnuspinnatus
ENSORLG00020018584	vars2	97	51.789	ENSPEMG00000014691	Vars2	92	53.005	Peromyscus_maniculatus_bairdii
ENSORLG00020018584	vars2	98	50.186	ENSPCIG00000015040	VARS2	91	52.243	Phascolarctos_cinereus
ENSORLG00020018584	vars2	94	72.639	ENSPFOG00000017616	vars2	93	73.320	Poecilia_formosa
ENSORLG00020018584	vars2	93	73.465	ENSPLAG00000019778	vars2	94	73.465	Poecilia_latipinna
ENSORLG00020018584	vars2	99	70.442	ENSPMEG00000011123	vars2	99	69.613	Poecilia_mexicana
ENSORLG00020018584	vars2	90	66.565	ENSPREG00000014998	vars2	93	66.565	Poecilia_reticulata
ENSORLG00020018584	vars2	96	51.292	ENSPPYG00000016424	VARS2	92	52.273	Pongo_abelii
ENSORLG00020018584	vars2	63	53.833	ENSPCAG00000006946	VARS2	76	53.833	Procavia_capensis
ENSORLG00020018584	vars2	96	50.712	ENSPCOG00000014839	VARS2	91	51.404	Propithecus_coquereli
ENSORLG00020018584	vars2	95	50.865	ENSPVAG00000004197	VARS2	92	51.632	Pteropus_vampyrus
ENSORLG00020018584	vars2	86	79.019	ENSPNYG00000010314	vars2	99	79.019	Pundamilia_nyererei
ENSORLG00020018584	vars2	99	65.325	ENSPNAG00000026793	vars2	94	67.871	Pygocentrus_nattereri
ENSORLG00020018584	vars2	95	50.047	ENSRNOG00000000833	Vars2	93	51.030	Rattus_norvegicus
ENSORLG00020018584	vars2	96	51.100	ENSRBIG00000032725	VARS2	92	52.174	Rhinopithecus_bieti
ENSORLG00020018584	vars2	96	51.100	ENSRROG00000043847	VARS2	92	52.174	Rhinopithecus_roxellana
ENSORLG00020018584	vars2	97	50.046	ENSSBOG00000033240	VARS2	90	51.161	Saimiri_boliviensis_boliviensis
ENSORLG00020018584	vars2	95	51.294	ENSSHAG00000009307	VARS2	92	52.170	Sarcophilus_harrisii
ENSORLG00020018584	vars2	96	66.189	ENSSFOG00015016187	vars2	93	67.192	Scleropages_formosus
ENSORLG00020018584	vars2	99	71.731	ENSSMAG00000020842	vars2	99	71.823	Scophthalmus_maximus
ENSORLG00020018584	vars2	95	76.323	ENSSDUG00000011598	vars2	99	74.401	Seriola_dumerili
ENSORLG00020018584	vars2	91	76.667	ENSSLDG00000015492	vars2	92	76.667	Seriola_lalandi_dorsalis
ENSORLG00020018584	vars2	78	59.181	ENSSPUG00000014700	VARS2	87	59.181	Sphenodon_punctatus
ENSORLG00020018584	vars2	99	71.311	ENSSPAG00000004654	vars2	99	71.311	Stegastes_partitus
ENSORLG00020018584	vars2	96	51.721	ENSSSCG00000001384	VARS2	91	55.870	Sus_scrofa
ENSORLG00020018584	vars2	94	71.078	ENSTRUG00000005264	vars2	94	71.078	Takifugu_rubripes
ENSORLG00020018584	vars2	96	67.782	ENSTNIG00000005916	vars2	94	68.560	Tetraodon_nigroviridis
ENSORLG00020018584	vars2	81	51.500	ENSTTRG00000012243	VARS2	79	60.667	Tursiops_truncatus
ENSORLG00020018584	vars2	97	50.658	ENSUAMG00000026124	VARS2	99	52.225	Ursus_americanus
ENSORLG00020018584	vars2	97	50.706	ENSUMAG00000019894	VARS2	94	51.603	Ursus_maritimus
ENSORLG00020018584	vars2	98	51.161	ENSVVUG00000010754	VARS2	88	52.512	Vulpes_vulpes
ENSORLG00020018584	vars2	88	50.462	ENSXETG00000003036	vars2	99	50.462	Xenopus_tropicalis
ENSORLG00020018584	vars2	97	72.306	ENSXCOG00000003455	vars2	94	75.458	Xiphophorus_couchianus
ENSORLG00020018584	vars2	99	72.284	ENSXMAG00000013523	vars2	95	74.391	Xiphophorus_maculatus