EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020018619 (Gene tree)
Gene ID: -
Gene Symbol: shrprbck1r
Alias: -
Full Name: sharpin and rbck1 related
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 9614 bases
Position: chr20:13430050-13439663
Accession: ZDB-GENE-080220-52
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020017611	zf-RanBP	PF00641.18	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020026206	-	3581	-	ENSORLP00020017611	709 (aa)	-	-

Gene Model

Click here to download ENSORLG00020018619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020018619's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020018619	shrprbck1r	60	55.809	ENSORLG00020000801	sharpin	95	55.809

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020018619	shrprbck1r	60	56.364	ENSAPOG00000023352	sharpin	95	56.364	Acanthochromis_polyacanthus
ENSORLG00020018619	shrprbck1r	100	80.587	ENSAPOG00000022737	shrprbck1r	100	80.587	Acanthochromis_polyacanthus
ENSORLG00020018619	shrprbck1r	100	79.466	ENSACIG00000002184	shrprbck1r	100	79.466	Amphilophus_citrinellus
ENSORLG00020018619	shrprbck1r	60	56.591	ENSAOCG00000017464	sharpin	95	56.591	Amphiprion_ocellaris
ENSORLG00020018619	shrprbck1r	100	82.584	ENSAOCG00000002890	shrprbck1r	100	82.584	Amphiprion_ocellaris
ENSORLG00020018619	shrprbck1r	60	56.591	ENSAPEG00000004049	sharpin	95	56.591	Amphiprion_percula
ENSORLG00020018619	shrprbck1r	100	80.645	ENSAPEG00000023274	shrprbck1r	100	80.645	Amphiprion_percula
ENSORLG00020018619	shrprbck1r	100	77.465	ENSATEG00000014561	shrprbck1r	100	78.028	Anabas_testudineus
ENSORLG00020018619	shrprbck1r	60	57.407	ENSATEG00000007832	sharpin	88	57.407	Anabas_testudineus
ENSORLG00020018619	shrprbck1r	100	78.059	ENSACLG00000022609	shrprbck1r	100	78.622	Astatotilapia_calliptera
ENSORLG00020018619	shrprbck1r	55	53.985	ENSAMXG00000006229	sharpin	97	53.985	Astyanax_mexicanus
ENSORLG00020018619	shrprbck1r	100	67.667	ENSAMXG00000021016	shrprbck1r	100	68.313	Astyanax_mexicanus
ENSORLG00020018619	shrprbck1r	100	74.438	ENSCSEG00000011306	shrprbck1r	100	74.579	Cynoglossus_semilaevis
ENSORLG00020018619	shrprbck1r	100	78.702	ENSCVAG00000007250	shrprbck1r	100	78.702	Cyprinodon_variegatus
ENSORLG00020018619	shrprbck1r	59	55.046	ENSCVAG00000006586	sharpin	95	55.046	Cyprinodon_variegatus
ENSORLG00020018619	shrprbck1r	100	69.559	ENSDARG00000059871	shrprbck1r	100	69.559	Danio_rerio
ENSORLG00020018619	shrprbck1r	55	52.699	ENSDARG00000076995	sharpin	94	52.699	Danio_rerio
ENSORLG00020018619	shrprbck1r	100	71.469	ENSELUG00000016022	shrprbck1r	100	71.469	Esox_lucius
ENSORLG00020018619	shrprbck1r	59	55.963	ENSFHEG00000013564	sharpin	94	55.963	Fundulus_heteroclitus
ENSORLG00020018619	shrprbck1r	51	60.725	ENSGMOG00000010123	sharpin	91	60.725	Gadus_morhua
ENSORLG00020018619	shrprbck1r	59	43.548	ENSGAFG00000021405	sharpin	95	43.548	Gambusia_affinis
ENSORLG00020018619	shrprbck1r	100	77.856	ENSGAFG00000009309	shrprbck1r	100	77.856	Gambusia_affinis
ENSORLG00020018619	shrprbck1r	75	77.024	ENSGACG00000002544	shrprbck1r	99	77.024	Gasterosteus_aculeatus
ENSORLG00020018619	shrprbck1r	100	78.481	ENSHBUG00000021933	shrprbck1r	100	78.682	Haplochromis_burtoni
ENSORLG00020018619	shrprbck1r	60	50.824	ENSHCOG00000018847	sharpin	80	50.935	Hippocampus_comes
ENSORLG00020018619	shrprbck1r	54	53.944	ENSIPUG00000011951	sharpin	95	88.462	Ictalurus_punctatus
ENSORLG00020018619	shrprbck1r	96	68.116	ENSIPUG00000014247	shrprbck1r	95	68.116	Ictalurus_punctatus
ENSORLG00020018619	shrprbck1r	100	78.720	ENSKMAG00000015215	shrprbck1r	100	77.992	Kryptolebias_marmoratus
ENSORLG00020018619	shrprbck1r	60	56.019	ENSKMAG00000015204	sharpin	76	56.019	Kryptolebias_marmoratus
ENSORLG00020018619	shrprbck1r	100	78.451	ENSLBEG00000016876	shrprbck1r	100	79.155	Labrus_bergylta
ENSORLG00020018619	shrprbck1r	60	56.849	ENSLBEG00000016624	sharpin	96	56.849	Labrus_bergylta
ENSORLG00020018619	shrprbck1r	95	52.847	ENSLACG00000010948	-	97	52.847	Latimeria_chalumnae
ENSORLG00020018619	shrprbck1r	100	67.177	ENSLOCG00000008910	shrprbck1r	100	67.177	Lepisosteus_oculatus
ENSORLG00020018619	shrprbck1r	100	77.042	ENSMAMG00000022930	shrprbck1r	100	77.606	Mastacembelus_armatus
ENSORLG00020018619	shrprbck1r	50	70.968	ENSMAMG00000014645	sharpin	95	70.968	Mastacembelus_armatus
ENSORLG00020018619	shrprbck1r	100	77.918	ENSMZEG00005021257	shrprbck1r	100	78.481	Maylandia_zebra
ENSORLG00020018619	shrprbck1r	100	75.900	ENSMMOG00000003764	shrprbck1r	100	76.184	Mola_mola
ENSORLG00020018619	shrprbck1r	50	70.968	ENSMALG00000020528	sharpin	96	70.968	Monopterus_albus
ENSORLG00020018619	shrprbck1r	96	78.351	ENSMALG00000008861	shrprbck1r	95	78.351	Monopterus_albus
ENSORLG00020018619	shrprbck1r	100	78.340	ENSNBRG00000002270	shrprbck1r	100	78.903	Neolamprologus_brichardi
ENSORLG00020018619	shrprbck1r	55	53.027	ENSONIG00000009626	-	97	53.027	Oreochromis_niloticus
ENSORLG00020018619	shrprbck1r	100	77.918	ENSONIG00000014401	shrprbck1r	100	78.481	Oreochromis_niloticus
ENSORLG00020018619	shrprbck1r	60	55.909	ENSORLG00000017281	sharpin	95	55.909	Oryzias_latipes
ENSORLG00020018619	shrprbck1r	100	98.590	ENSORLG00000007392	shrprbck1r	100	98.590	Oryzias_latipes
ENSORLG00020018619	shrprbck1r	100	97.038	ENSORLG00015018865	shrprbck1r	100	97.038	Oryzias_latipes_hsok
ENSORLG00020018619	shrprbck1r	60	56.036	ENSORLG00015009860	sharpin	95	56.036	Oryzias_latipes_hsok
ENSORLG00020018619	shrprbck1r	100	93.230	ENSOMEG00000012749	shrprbck1r	100	93.230	Oryzias_melastigma
ENSORLG00020018619	shrprbck1r	50	47.740	ENSOMEG00000005729	sharpin	85	47.740	Oryzias_melastigma
ENSORLG00020018619	shrprbck1r	65	58.351	ENSPKIG00000018308	-	96	58.386	Paramormyrops_kingsleyae
ENSORLG00020018619	shrprbck1r	100	69.596	ENSPKIG00000006933	shrprbck1r	100	69.735	Paramormyrops_kingsleyae
ENSORLG00020018619	shrprbck1r	100	74.507	ENSPMGG00000013254	shrprbck1r	100	74.507	Periophthalmus_magnuspinnatus
ENSORLG00020018619	shrprbck1r	100	78.561	ENSPFOG00000004214	shrprbck1r	100	78.561	Poecilia_formosa
ENSORLG00020018619	shrprbck1r	59	55.023	ENSPFOG00000015253	sharpin	95	55.023	Poecilia_formosa
ENSORLG00020018619	shrprbck1r	59	55.251	ENSPLAG00000000423	sharpin	95	55.251	Poecilia_latipinna
ENSORLG00020018619	shrprbck1r	100	78.561	ENSPLAG00000020523	shrprbck1r	100	78.561	Poecilia_latipinna
ENSORLG00020018619	shrprbck1r	100	76.545	ENSPMEG00000006877	shrprbck1r	100	76.545	Poecilia_mexicana
ENSORLG00020018619	shrprbck1r	100	75.882	ENSPREG00000014689	shrprbck1r	100	75.882	Poecilia_reticulata
ENSORLG00020018619	shrprbck1r	59	54.566	ENSPREG00000009702	sharpin	95	54.566	Poecilia_reticulata
ENSORLG00020018619	shrprbck1r	100	78.340	ENSPNYG00000022601	shrprbck1r	100	78.903	Pundamilia_nyererei
ENSORLG00020018619	shrprbck1r	100	66.758	ENSPNAG00000007847	shrprbck1r	100	66.894	Pygocentrus_nattereri
ENSORLG00020018619	shrprbck1r	55	53.728	ENSPNAG00000002911	sharpin	99	53.846	Pygocentrus_nattereri
ENSORLG00020018619	shrprbck1r	63	51.020	ENSSFOG00015004028	sharpin	99	51.992	Scleropages_formosus
ENSORLG00020018619	shrprbck1r	75	63.109	ENSSFOG00015014150	-	96	63.109	Scleropages_formosus
ENSORLG00020018619	shrprbck1r	100	77.191	ENSSMAG00000018085	shrprbck1r	100	77.330	Scophthalmus_maximus
ENSORLG00020018619	shrprbck1r	100	81.127	ENSSDUG00000002959	shrprbck1r	100	81.831	Seriola_dumerili
ENSORLG00020018619	shrprbck1r	60	41.741	ENSSDUG00000019039	sharpin	96	41.741	Seriola_dumerili
ENSORLG00020018619	shrprbck1r	100	80.423	ENSSLDG00000009026	shrprbck1r	100	81.127	Seriola_lalandi_dorsalis
ENSORLG00020018619	shrprbck1r	96	79.390	ENSSPAG00000016097	shrprbck1r	99	79.390	Stegastes_partitus
ENSORLG00020018619	shrprbck1r	100	76.404	ENSTRUG00000006949	shrprbck1r	100	76.404	Takifugu_rubripes
ENSORLG00020018619	shrprbck1r	60	49.423	ENSTRUG00000011046	sharpin	96	49.425	Takifugu_rubripes
ENSORLG00020018619	shrprbck1r	55	53.367	ENSTNIG00000008521	sharpin	94	53.367	Tetraodon_nigroviridis
ENSORLG00020018619	shrprbck1r	100	74.965	ENSXCOG00000006701	shrprbck1r	100	74.965	Xiphophorus_couchianus
ENSORLG00020018619	shrprbck1r	59	54.691	ENSXMAG00000022076	sharpin	95	54.691	Xiphophorus_maculatus
ENSORLG00020018619	shrprbck1r	100	74.965	ENSXMAG00000018972	shrprbck1r	100	74.965	Xiphophorus_maculatus