EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020018921 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 3808 bases
Position: chr17:8729784-8733591
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020033079	zf-C2H2	PF00096.26	4.8e-34	1	5
ENSORLP00020033079	zf-C2H2	PF00096.26	4.8e-34	2	5
ENSORLP00020033079	zf-C2H2	PF00096.26	4.8e-34	3	5
ENSORLP00020033079	zf-C2H2	PF00096.26	4.8e-34	4	5
ENSORLP00020033079	zf-C2H2	PF00096.26	4.8e-34	5	5
ENSORLP00020033079	zf-met	PF12874.7	7.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020034515	-	975	-	ENSORLP00020033079	324 (aa)	-	-

Gene Model

Click here to download ENSORLG00020018921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020018921's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020018921	-	96	35.897	ENSORLG00020010953	-	95	35.897
ENSORLG00020018921	-	70	41.758	ENSORLG00020010950	-	97	41.758
ENSORLG00020018921	-	94	47.573	ENSORLG00020009419	-	98	44.295
ENSORLG00020018921	-	84	40.000	ENSORLG00020010647	-	89	42.132
ENSORLG00020018921	-	84	45.977	ENSORLG00020009180	-	99	45.000
ENSORLG00020018921	-	76	38.690	ENSORLG00020009680	znf652	59	37.766
ENSORLG00020018921	-	83	42.640	ENSORLG00020018069	-	95	45.304
ENSORLG00020018921	-	94	43.038	ENSORLG00020016754	-	94	40.196
ENSORLG00020018921	-	78	45.806	ENSORLG00020017514	-	99	45.806
ENSORLG00020018921	-	88	45.902	ENSORLG00020016037	-	96	48.515
ENSORLG00020018921	-	73	39.904	ENSORLG00020018495	-	64	39.904
ENSORLG00020018921	-	94	36.058	ENSORLG00020005132	-	92	37.222
ENSORLG00020018921	-	94	40.670	ENSORLG00020020419	-	93	40.670
ENSORLG00020018921	-	94	30.986	ENSORLG00020010923	-	71	30.986
ENSORLG00020018921	-	79	43.000	ENSORLG00020004353	-	95	43.000
ENSORLG00020018921	-	74	40.764	ENSORLG00020018503	-	69	39.744
ENSORLG00020018921	-	91	42.697	ENSORLG00020008933	-	99	42.697
ENSORLG00020018921	-	95	40.506	ENSORLG00020008018	-	96	40.506
ENSORLG00020018921	-	94	46.231	ENSORLG00020000481	-	98	43.721
ENSORLG00020018921	-	97	43.612	ENSORLG00020010804	-	98	42.512
ENSORLG00020018921	-	94	40.526	ENSORLG00020021196	-	75	40.526
ENSORLG00020018921	-	91	43.169	ENSORLG00020009184	-	99	43.169
ENSORLG00020018921	-	92	42.623	ENSORLG00020000219	-	83	42.623
ENSORLG00020018921	-	87	38.255	ENSORLG00020002128	-	94	40.659
ENSORLG00020018921	-	83	32.986	ENSORLG00020003948	ZNF384	52	32.986
ENSORLG00020018921	-	96	48.246	ENSORLG00020015703	-	79	48.246
ENSORLG00020018921	-	76	43.704	ENSORLG00020006820	-	66	43.704
ENSORLG00020018921	-	94	41.060	ENSORLG00020007599	-	84	41.060
ENSORLG00020018921	-	94	43.523	ENSORLG00020008891	-	99	43.455
ENSORLG00020018921	-	84	40.566	ENSORLG00020001912	znf236	71	40.566
ENSORLG00020018921	-	75	41.202	ENSORLG00020010020	-	69	41.202
ENSORLG00020018921	-	69	45.133	ENSORLG00020019341	-	93	54.054
ENSORLG00020018921	-	74	46.053	ENSORLG00020011075	-	90	46.053
ENSORLG00020018921	-	91	43.243	ENSORLG00020000246	-	99	43.243
ENSORLG00020018921	-	93	44.608	ENSORLG00020010880	-	91	44.608
ENSORLG00020018921	-	91	43.172	ENSORLG00020009857	-	99	47.009
ENSORLG00020018921	-	91	49.206	ENSORLG00020001707	-	97	49.206
ENSORLG00020018921	-	92	40.625	ENSORLG00020004370	-	99	39.245
ENSORLG00020018921	-	69	36.905	ENSORLG00020012967	scrt1b	70	34.815
ENSORLG00020018921	-	93	41.850	ENSORLG00020010560	-	98	41.414
ENSORLG00020018921	-	81	41.453	ENSORLG00020009139	-	98	42.254
ENSORLG00020018921	-	96	41.139	ENSORLG00020016666	-	92	36.585
ENSORLG00020018921	-	79	34.078	ENSORLG00020010937	patz1	51	34.000
ENSORLG00020018921	-	73	48.718	ENSORLG00020017528	-	74	48.718
ENSORLG00020018921	-	73	40.171	ENSORLG00020001922	-	71	40.708
ENSORLG00020018921	-	84	37.968	ENSORLG00020018791	-	86	39.773
ENSORLG00020018921	-	72	33.040	ENSORLG00020014595	PRDM15	50	33.040
ENSORLG00020018921	-	63	44.318	ENSORLG00020010932	-	72	44.318
ENSORLG00020018921	-	86	43.382	ENSORLG00020000161	-	94	42.553
ENSORLG00020018921	-	73	44.196	ENSORLG00020009089	-	85	44.196
ENSORLG00020018921	-	74	39.409	ENSORLG00020018051	prdm5	76	39.801
ENSORLG00020018921	-	77	38.462	ENSORLG00020008787	snai2	70	38.462
ENSORLG00020018921	-	92	42.308	ENSORLG00020010171	-	99	41.346
ENSORLG00020018921	-	93	45.070	ENSORLG00020010038	-	71	42.541
ENSORLG00020018921	-	67	41.748	ENSORLG00020005815	-	98	41.748
ENSORLG00020018921	-	94	43.882	ENSORLG00020010916	-	90	46.500
ENSORLG00020018921	-	74	38.994	ENSORLG00020006144	-	84	36.923
ENSORLG00020018921	-	86	34.074	ENSORLG00020001791	-	85	34.074
ENSORLG00020018921	-	74	36.574	ENSORLG00020004889	ZNF319	86	36.574
ENSORLG00020018921	-	93	44.601	ENSORLG00020021857	-	82	44.601
ENSORLG00020018921	-	96	41.429	ENSORLG00020007967	-	97	46.067
ENSORLG00020018921	-	74	45.055	ENSORLG00020008424	-	85	45.055
ENSORLG00020018921	-	86	41.667	ENSORLG00020008240	-	73	41.353
ENSORLG00020018921	-	94	43.836	ENSORLG00020006148	-	89	43.836
ENSORLG00020018921	-	71	37.963	ENSORLG00020018685	znf319b	85	33.790
ENSORLG00020018921	-	96	43.460	ENSORLG00020017164	-	99	42.623
ENSORLG00020018921	-	73	41.250	ENSORLG00020003719	GFI1B	65	41.250
ENSORLG00020018921	-	69	44.203	ENSORLG00020011234	-	72	44.444
ENSORLG00020018921	-	94	41.237	ENSORLG00020000639	-	77	30.739
ENSORLG00020018921	-	98	38.506	ENSORLG00020008744	-	77	38.506
ENSORLG00020018921	-	95	43.548	ENSORLG00020008346	-	99	43.548
ENSORLG00020018921	-	76	41.827	ENSORLG00020008484	-	82	41.827
ENSORLG00020018921	-	95	37.589	ENSORLG00020000264	-	75	35.398
ENSORLG00020018921	-	74	40.796	ENSORLG00020009965	-	98	41.270
ENSORLG00020018921	-	77	36.087	ENSORLG00020007790	zbtb48	63	36.087
ENSORLG00020018921	-	94	33.657	ENSORLG00020004313	-	71	33.333
ENSORLG00020018921	-	75	38.144	ENSORLG00020009554	-	78	38.144
ENSORLG00020018921	-	71	40.000	ENSORLG00020002817	GFI1	65	40.000
ENSORLG00020018921	-	87	43.089	ENSORLG00020010250	-	94	41.711
ENSORLG00020018921	-	68	42.308	ENSORLG00020001758	-	57	42.308
ENSORLG00020018921	-	73	39.744	ENSORLG00020010285	znf646	72	33.333
ENSORLG00020018921	-	76	45.133	ENSORLG00020007018	-	78	45.133
ENSORLG00020018921	-	78	31.073	ENSORLG00020000009	znf710b	59	31.197
ENSORLG00020018921	-	69	47.208	ENSORLG00020007074	-	98	45.946
ENSORLG00020018921	-	94	48.344	ENSORLG00020010636	-	88	48.344
ENSORLG00020018921	-	96	44.351	ENSORLG00020017850	-	98	46.696
ENSORLG00020018921	-	96	43.842	ENSORLG00020009943	-	99	43.842
ENSORLG00020018921	-	98	43.069	ENSORLG00020017483	-	96	44.248
ENSORLG00020018921	-	81	43.379	ENSORLG00020011149	-	88	43.320

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020018921	-	73	38.462	ENSAPOG00000008319	-	58	36.759	Acanthochromis_polyacanthus
ENSORLG00020018921	-	95	39.810	ENSAPOG00000019138	-	68	39.810	Acanthochromis_polyacanthus
ENSORLG00020018921	-	58	38.889	ENSACIG00000004641	-	58	37.179	Amphilophus_citrinellus
ENSORLG00020018921	-	96	41.667	ENSACIG00000007464	-	80	41.667	Amphilophus_citrinellus
ENSORLG00020018921	-	76	33.858	ENSACIG00000002944	-	91	33.858	Amphilophus_citrinellus
ENSORLG00020018921	-	69	43.827	ENSACIG00000017892	-	74	43.827	Amphilophus_citrinellus
ENSORLG00020018921	-	60	42.982	ENSACIG00000006826	-	55	39.310	Amphilophus_citrinellus
ENSORLG00020018921	-	80	38.462	ENSAOCG00000014769	-	80	38.462	Amphiprion_ocellaris
ENSORLG00020018921	-	95	38.034	ENSAOCG00000016897	-	63	37.725	Amphiprion_ocellaris
ENSORLG00020018921	-	70	36.986	ENSAOCG00000001325	-	66	37.692	Amphiprion_ocellaris
ENSORLG00020018921	-	80	38.462	ENSAOCG00000015944	-	73	38.462	Amphiprion_ocellaris
ENSORLG00020018921	-	67	33.898	ENSAOCG00000006744	-	78	33.898	Amphiprion_ocellaris
ENSORLG00020018921	-	85	40.411	ENSAPEG00000010013	-	58	40.411	Amphiprion_percula
ENSORLG00020018921	-	95	37.725	ENSAPEG00000001556	-	63	37.725	Amphiprion_percula
ENSORLG00020018921	-	95	44.271	ENSAPEG00000018762	-	69	44.271	Amphiprion_percula
ENSORLG00020018921	-	82	41.615	ENSATEG00000018931	-	89	41.615	Anabas_testudineus
ENSORLG00020018921	-	73	45.528	ENSACLG00000011658	-	93	45.528	Astatotilapia_calliptera
ENSORLG00020018921	-	75	40.828	ENSACLG00000005694	-	54	40.828	Astatotilapia_calliptera
ENSORLG00020018921	-	72	41.818	ENSAMXG00000029518	-	62	48.352	Astyanax_mexicanus
ENSORLG00020018921	-	73	36.913	ENSCING00000002128	zf(c2h2)-35	62	36.913	Ciona_intestinalis
ENSORLG00020018921	-	92	40.187	ENSCSEG00000010453	-	90	40.187	Cynoglossus_semilaevis
ENSORLG00020018921	-	74	52.500	ENSCSEG00000015593	-	74	52.500	Cynoglossus_semilaevis
ENSORLG00020018921	-	79	34.400	ENSCSEG00000010264	-	82	34.400	Cynoglossus_semilaevis
ENSORLG00020018921	-	96	43.114	ENSCVAG00000015616	-	94	45.522	Cyprinodon_variegatus
ENSORLG00020018921	-	79	39.024	ENSCVAG00000003250	-	83	39.024	Cyprinodon_variegatus
ENSORLG00020018921	-	78	43.182	ENSCVAG00000020141	-	95	43.182	Cyprinodon_variegatus
ENSORLG00020018921	-	96	40.141	ENSCVAG00000006484	-	71	43.564	Cyprinodon_variegatus
ENSORLG00020018921	-	88	44.792	ENSCVAG00000012682	-	75	44.792	Cyprinodon_variegatus
ENSORLG00020018921	-	92	39.024	ENSCVAG00000006653	-	92	39.024	Cyprinodon_variegatus
ENSORLG00020018921	-	74	42.623	ENSEBUG00000007931	-	64	42.623	Eptatretus_burgeri
ENSORLG00020018921	-	82	44.444	ENSELUG00000024007	-	84	43.651	Esox_lucius
ENSORLG00020018921	-	76	42.188	ENSELUG00000001909	-	79	31.138	Esox_lucius
ENSORLG00020018921	-	93	43.077	ENSFHEG00000023184	-	81	36.604	Fundulus_heteroclitus
ENSORLG00020018921	-	96	41.912	ENSGAFG00000001879	-	93	41.912	Gambusia_affinis
ENSORLG00020018921	-	98	43.017	ENSGAFG00000008204	-	86	36.593	Gambusia_affinis
ENSORLG00020018921	-	71	37.755	ENSGAFG00000011998	-	67	37.755	Gambusia_affinis
ENSORLG00020018921	-	75	40.828	ENSHBUG00000006656	-	66	40.828	Haplochromis_burtoni
ENSORLG00020018921	-	90	41.573	ENSHCOG00000013489	-	90	45.116	Hippocampus_comes
ENSORLG00020018921	-	82	43.605	ENSHCOG00000015497	-	88	43.750	Hippocampus_comes
ENSORLG00020018921	-	95	36.393	ENSHCOG00000008550	-	86	35.152	Hippocampus_comes
ENSORLG00020018921	-	77	30.120	ENSHCOG00000008227	-	55	30.120	Hippocampus_comes
ENSORLG00020018921	-	69	42.697	ENSHCOG00000020670	-	73	42.222	Hippocampus_comes
ENSORLG00020018921	-	95	38.710	ENSHCOG00000019389	-	76	38.710	Hippocampus_comes
ENSORLG00020018921	-	94	37.725	ENSHCOG00000008213	-	77	34.532	Hippocampus_comes
ENSORLG00020018921	-	95	36.393	ENSHCOG00000001873	-	86	35.152	Hippocampus_comes
ENSORLG00020018921	-	70	39.560	ENSIPUG00000024004	-	79	39.560	Ictalurus_punctatus
ENSORLG00020018921	-	83	35.211	ENSKMAG00000007699	-	76	33.005	Kryptolebias_marmoratus
ENSORLG00020018921	-	94	41.212	ENSLBEG00000006161	-	91	40.127	Labrus_bergylta
ENSORLG00020018921	-	74	34.536	ENSLBEG00000017424	-	97	35.185	Labrus_bergylta
ENSORLG00020018921	-	74	38.000	ENSLBEG00000001132	-	82	38.621	Labrus_bergylta
ENSORLG00020018921	-	87	42.105	ENSLBEG00000007106	-	77	42.105	Labrus_bergylta
ENSORLG00020018921	-	92	35.366	ENSLBEG00000011210	-	71	35.036	Labrus_bergylta
ENSORLG00020018921	-	89	40.000	ENSLOCG00000004208	-	99	40.000	Lepisosteus_oculatus
ENSORLG00020018921	-	81	40.909	ENSMAMG00000017939	-	93	40.909	Mastacembelus_armatus
ENSORLG00020018921	-	74	36.327	ENSMZEG00005013907	-	74	39.286	Maylandia_zebra
ENSORLG00020018921	-	62	44.615	ENSMMOG00000013330	-	86	44.615	Mola_mola
ENSORLG00020018921	-	77	39.037	ENSMALG00000004279	-	87	39.037	Monopterus_albus
ENSORLG00020018921	-	94	50.000	ENSNBRG00000006112	-	61	44.545	Neolamprologus_brichardi
ENSORLG00020018921	-	85	38.679	ENSONIG00000005050	-	100	38.679	Oreochromis_niloticus
ENSORLG00020018921	-	80	37.500	ENSONIG00000007967	-	65	37.500	Oreochromis_niloticus
ENSORLG00020018921	-	87	36.905	ENSORLG00000002268	-	93	36.759	Oryzias_latipes
ENSORLG00020018921	-	92	47.059	ENSORLG00000021885	-	63	58.182	Oryzias_latipes
ENSORLG00020018921	-	80	47.191	ENSORLG00015018099	-	67	47.191	Oryzias_latipes_hsok
ENSORLG00020018921	-	81	41.045	ENSOMEG00000005578	-	78	41.045	Oryzias_melastigma
ENSORLG00020018921	-	86	44.361	ENSPKIG00000005164	-	55	40.299	Paramormyrops_kingsleyae
ENSORLG00020018921	-	96	46.087	ENSPMGG00000002659	-	65	46.087	Periophthalmus_magnuspinnatus
ENSORLG00020018921	-	97	44.295	ENSPMGG00000002661	-	91	44.295	Periophthalmus_magnuspinnatus
ENSORLG00020018921	-	62	40.642	ENSPMGG00000006928	-	58	40.642	Periophthalmus_magnuspinnatus
ENSORLG00020018921	-	71	43.312	ENSPMGG00000002455	-	95	43.312	Periophthalmus_magnuspinnatus
ENSORLG00020018921	-	73	45.455	ENSPMGG00000009571	-	73	45.455	Periophthalmus_magnuspinnatus
ENSORLG00020018921	-	68	32.530	ENSPMGG00000019750	-	78	32.558	Periophthalmus_magnuspinnatus
ENSORLG00020018921	-	96	33.088	ENSPMGG00000007051	-	89	33.784	Periophthalmus_magnuspinnatus
ENSORLG00020018921	-	73	37.500	ENSPMAG00000002022	-	100	37.500	Petromyzon_marinus
ENSORLG00020018921	-	68	37.864	ENSPMAG00000004189	-	99	37.864	Petromyzon_marinus
ENSORLG00020018921	-	74	44.554	ENSPMAG00000000839	-	96	44.554	Petromyzon_marinus
ENSORLG00020018921	-	80	41.053	ENSPFOG00000018860	-	99	41.053	Poecilia_formosa
ENSORLG00020018921	-	94	43.066	ENSPFOG00000009491	-	73	43.066	Poecilia_formosa
ENSORLG00020018921	-	96	40.741	ENSPLAG00000010067	-	92	40.741	Poecilia_latipinna
ENSORLG00020018921	-	71	41.053	ENSPLAG00000008941	-	80	41.053	Poecilia_latipinna
ENSORLG00020018921	-	93	36.196	ENSPLAG00000014832	-	90	36.196	Poecilia_latipinna
ENSORLG00020018921	-	85	36.196	ENSPMEG00000005210	-	83	36.196	Poecilia_mexicana
ENSORLG00020018921	-	90	45.349	ENSPMEG00000002953	-	77	45.349	Poecilia_mexicana
ENSORLG00020018921	-	96	45.370	ENSPMEG00000024117	-	73	43.066	Poecilia_mexicana
ENSORLG00020018921	-	73	42.636	ENSPREG00000009488	-	96	42.636	Poecilia_reticulata
ENSORLG00020018921	-	54	40.336	ENSPREG00000002603	-	58	40.336	Poecilia_reticulata
ENSORLG00020018921	-	94	33.526	ENSPREG00000008907	-	66	33.526	Poecilia_reticulata
ENSORLG00020018921	-	66	41.228	ENSPNYG00000017888	-	53	41.228	Pundamilia_nyererei
ENSORLG00020018921	-	82	38.554	ENSPNAG00000005946	-	93	37.671	Pygocentrus_nattereri
ENSORLG00020018921	-	68	38.679	ENSSFOG00015011531	-	81	38.095	Scleropages_formosus
ENSORLG00020018921	-	83	43.293	ENSSMAG00000013291	-	91	41.975	Scophthalmus_maximus
ENSORLG00020018921	-	60	39.506	ENSSMAG00000004259	-	55	39.506	Scophthalmus_maximus
ENSORLG00020018921	-	92	37.097	ENSSMAG00000008308	-	59	37.097	Scophthalmus_maximus
ENSORLG00020018921	-	94	40.594	ENSSDUG00000020774	-	78	40.594	Seriola_dumerili
ENSORLG00020018921	-	70	42.286	ENSSLDG00000011849	-	56	42.286	Seriola_lalandi_dorsalis
ENSORLG00020018921	-	67	35.593	ENSSLDG00000014436	-	72	35.593	Seriola_lalandi_dorsalis
ENSORLG00020018921	-	70	40.351	ENSSPAG00000011544	-	53	35.398	Stegastes_partitus
ENSORLG00020018921	-	70	40.000	ENSSPAG00000011533	-	82	40.000	Stegastes_partitus
ENSORLG00020018921	-	78	40.441	ENSXETG00000012506	znf91	100	41.146	Xenopus_tropicalis
ENSORLG00020018921	-	90	35.398	ENSXCOG00000014360	-	67	35.398	Xiphophorus_couchianus
ENSORLG00020018921	-	73	45.000	ENSXCOG00000000254	-	62	45.000	Xiphophorus_couchianus
ENSORLG00020018921	-	70	40.426	ENSXCOG00000020768	-	66	40.426	Xiphophorus_couchianus
ENSORLG00020018921	-	93	40.361	ENSXCOG00000003441	-	85	40.361	Xiphophorus_couchianus
ENSORLG00020018921	-	95	30.508	ENSXMAG00000022657	-	83	31.818	Xiphophorus_maculatus
ENSORLG00020018921	-	70	35.976	ENSXMAG00000012936	-	79	35.976	Xiphophorus_maculatus