EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020019033 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 31614 bases
Position: chr21:3676715-3708328
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020018030	RNase_Zc3h12a	PF11977.8	2.1e-64	1	1
ENSORLP00020018051	RNase_Zc3h12a	PF11977.8	4.1e-64	1	1
ENSORLP00020033163	RNase_Zc3h12a	PF11977.8	4.1e-64	1	1
ENSORLP00020018024	RNase_Zc3h12a	PF11977.8	8.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020026768	-	5305	-	ENSORLP00020033163	884 (aa)	-	-
ENSORLT00020026783	-	5514	-	ENSORLP00020018051	884 (aa)	-	-
ENSORLT00020026798	-	855	-	ENSORLP00020018024	284 (aa)	-	-
ENSORLT00020026747	-	1749	-	ENSORLP00020018030	582 (aa)	-	-

Gene Model

Click here to download ENSORLG00020019033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019033's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020019033	-	81	55.696	ENSORLG00020016107	-	53	56.098
ENSORLG00020019033	-	82	68.201	ENSORLG00020021793	zc3h12b	55	68.997
ENSORLG00020019033	-	86	73.279	ENSORLG00020017005	-	99	43.396
ENSORLG00020019033	-	90	53.383	ENSORLG00020019555	zc3h12a	52	52.691

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019033	-	82	69.828	ENSG00000102053	ZC3H12B	70	57.143	Homo_sapiens
ENSORLG00020019033	-	82	71.552	ENSAPOG00000001738	zc3h12b	58	71.429	Acanthochromis_polyacanthus
ENSORLG00020019033	-	95	84.036	ENSACIG00000005689	-	74	84.255	Amphilophus_citrinellus
ENSORLG00020019033	-	90	66.667	ENSACIG00000009787	zc3h12b	61	70.988	Amphilophus_citrinellus
ENSORLG00020019033	-	82	71.121	ENSAOCG00000010094	zc3h12b	60	71.739	Amphiprion_ocellaris
ENSORLG00020019033	-	82	71.121	ENSAPEG00000007479	zc3h12b	58	71.739	Amphiprion_percula
ENSORLG00020019033	-	82	69.397	ENSAPLG00000003874	ZC3H12B	99	73.401	Anas_platyrhynchos
ENSORLG00020019033	-	82	68.966	ENSACAG00000013582	ZC3H12B	57	70.794	Anolis_carolinensis
ENSORLG00020019033	-	82	69.397	ENSANAG00000010296	ZC3H12B	59	66.471	Aotus_nancymaae
ENSORLG00020019033	-	89	67.188	ENSACLG00000007669	zc3h12b	63	70.206	Astatotilapia_calliptera
ENSORLG00020019033	-	96	69.162	ENSAMXG00000005320	-	99	42.191	Astyanax_mexicanus
ENSORLG00020019033	-	91	64.479	ENSAMXG00000038308	-	99	42.186	Astyanax_mexicanus
ENSORLG00020019033	-	82	70.259	ENSBTAG00000002206	ZC3H12B	59	67.353	Bos_taurus
ENSORLG00020019033	-	82	69.828	ENSCJAG00000001427	ZC3H12B	59	66.765	Callithrix_jacchus
ENSORLG00020019033	-	82	69.828	ENSCAFG00000031307	ZC3H12B	60	66.176	Canis_familiaris
ENSORLG00020019033	-	82	69.828	ENSCAFG00020017995	ZC3H12B	60	66.176	Canis_lupus_dingo
ENSORLG00020019033	-	82	69.828	ENSTSYG00000011302	ZC3H12B	70	57.631	Carlito_syrichta
ENSORLG00020019033	-	82	69.397	ENSCCAG00000030171	ZC3H12B	59	66.471	Cebus_capucinus
ENSORLG00020019033	-	82	69.828	ENSCATG00000044845	ZC3H12B	70	57.143	Cercocebus_atys
ENSORLG00020019033	-	82	68.966	ENSCLAG00000003600	ZC3H12B	68	57.639	Chinchilla_lanigera
ENSORLG00020019033	-	82	69.828	ENSCSAG00000011955	-	95	54.518	Chlorocebus_sabaeus
ENSORLG00020019033	-	82	69.828	ENSCPBG00000006983	ZC3H12B	62	71.746	Chrysemys_picta_bellii
ENSORLG00020019033	-	82	69.828	ENSCANG00000006746	ZC3H12B	59	66.765	Colobus_angolensis_palliatus
ENSORLG00020019033	-	82	69.397	ENSCGRG00001018643	Zc3h12b	75	60.349	Cricetulus_griseus_chok1gshd
ENSORLG00020019033	-	82	69.397	ENSCGRG00000015623	Zc3h12b	75	60.349	Cricetulus_griseus_crigri
ENSORLG00020019033	-	82	71.130	ENSCVAG00000010473	zc3h12b	59	72.698	Cyprinodon_variegatus
ENSORLG00020019033	-	82	68.936	ENSDARG00000062463	zc3h12b	65	67.638	Danio_rerio
ENSORLG00020019033	-	82	68.534	ENSDNOG00000038439	ZC3H12B	64	67.552	Dasypus_novemcinctus
ENSORLG00020019033	-	82	69.397	ENSDORG00000024832	Zc3h12b	68	66.471	Dipodomys_ordii
ENSORLG00020019033	-	81	58.079	ENSEASG00005006995	ZC3H12B	80	49.885	Equus_asinus_asinus
ENSORLG00020019033	-	82	69.828	ENSECAG00000020993	ZC3H12B	95	53.731	Equus_caballus
ENSORLG00020019033	-	82	70.259	ENSFCAG00000032299	ZC3H12B	60	66.176	Felis_catus
ENSORLG00020019033	-	82	69.828	ENSFALG00000004293	ZC3H12B	69	73.103	Ficedula_albicollis
ENSORLG00020019033	-	82	68.534	ENSFDAG00000014258	ZC3H12B	66	57.482	Fukomys_damarensis
ENSORLG00020019033	-	95	81.009	ENSFHEG00000014717	-	93	85.197	Fundulus_heteroclitus
ENSORLG00020019033	-	82	69.397	ENSGALG00000039391	ZC3H12B	60	71.111	Gallus_gallus
ENSORLG00020019033	-	82	70.690	ENSGAFG00000006871	zc3h12b	59	71.340	Gambusia_affinis
ENSORLG00020019033	-	95	81.682	ENSGAFG00000004701	-	99	56.987	Gambusia_affinis
ENSORLG00020019033	-	82	70.259	ENSGAGG00000005569	ZC3H12B	62	72.063	Gopherus_agassizii
ENSORLG00020019033	-	82	69.828	ENSGGOG00000024638	ZC3H12B	70	57.143	Gorilla_gorilla
ENSORLG00020019033	-	92	82.985	ENSHBUG00000003376	-	91	70.779	Haplochromis_burtoni
ENSORLG00020019033	-	89	67.188	ENSHBUG00000000645	zc3h12b	64	67.033	Haplochromis_burtoni
ENSORLG00020019033	-	82	68.103	ENSHGLG00000003107	ZC3H12B	68	56.713	Heterocephalus_glaber_female
ENSORLG00020019033	-	82	68.103	ENSHGLG00100010721	ZC3H12B	68	56.713	Heterocephalus_glaber_male
ENSORLG00020019033	-	83	74.262	ENSHCOG00000017425	-	89	71.429	Hippocampus_comes
ENSORLG00020019033	-	94	77.090	ENSIPUG00000014830	-	72	77.090	Ictalurus_punctatus
ENSORLG00020019033	-	84	68.201	ENSIPUG00000016745	zc3h12b	55	67.246	Ictalurus_punctatus
ENSORLG00020019033	-	82	68.966	ENSSTOG00000020962	ZC3H12B	68	57.506	Ictidomys_tridecemlineatus
ENSORLG00020019033	-	82	68.534	ENSJJAG00000015755	Zc3h12b	64	69.836	Jaculus_jaculus
ENSORLG00020019033	-	82	71.245	ENSKMAG00000004921	zc3h12b	60	68.788	Kryptolebias_marmoratus
ENSORLG00020019033	-	85	67.206	ENSLBEG00000006448	zc3h12b	59	66.038	Labrus_bergylta
ENSORLG00020019033	-	82	69.828	ENSLACG00000014526	ZC3H12B	62	68.769	Latimeria_chalumnae
ENSORLG00020019033	-	84	76.446	ENSLOCG00000010717	-	97	45.047	Lepisosteus_oculatus
ENSORLG00020019033	-	82	68.803	ENSLOCG00000014631	zc3h12b	56	68.222	Lepisosteus_oculatus
ENSORLG00020019033	-	82	69.397	ENSLAFG00000014891	ZC3H12B	68	67.964	Loxodonta_africana
ENSORLG00020019033	-	82	69.828	ENSMFAG00000042237	ZC3H12B	70	57.143	Macaca_fascicularis
ENSORLG00020019033	-	82	69.828	ENSMMUG00000012261	ZC3H12B	70	57.143	Macaca_mulatta
ENSORLG00020019033	-	82	69.828	ENSMNEG00000043003	ZC3H12B	70	57.143	Macaca_nemestrina
ENSORLG00020019033	-	82	69.828	ENSMLEG00000042630	ZC3H12B	70	57.143	Mandrillus_leucophaeus
ENSORLG00020019033	-	90	66.667	ENSMAMG00000011770	zc3h12b	67	63.660	Mastacembelus_armatus
ENSORLG00020019033	-	89	67.188	ENSMZEG00005007548	zc3h12b	64	67.033	Maylandia_zebra
ENSORLG00020019033	-	82	69.397	ENSMGAG00000000759	ZC3H12B	60	71.746	Meleagris_gallopavo
ENSORLG00020019033	-	82	69.828	ENSMAUG00000017800	Zc3h12b	74	60.349	Mesocricetus_auratus
ENSORLG00020019033	-	82	68.966	ENSMICG00000010697	ZC3H12B	79	57.604	Microcebus_murinus
ENSORLG00020019033	-	82	68.936	ENSMOCG00000000094	Zc3h12b	67	69.419	Microtus_ochrogaster
ENSORLG00020019033	-	82	70.690	ENSMMOG00000008734	zc3h12b	61	70.948	Mola_mola
ENSORLG00020019033	-	89	65.625	ENSMODG00000005206	ZC3H12B	66	66.205	Monodelphis_domestica
ENSORLG00020019033	-	95	81.176	ENSMALG00000016807	-	99	60.196	Monopterus_albus
ENSORLG00020019033	-	74	67.619	ENSMALG00000021153	zc3h12b	62	64.438	Monopterus_albus
ENSORLG00020019033	-	82	68.966	ENSMUSG00000035045	Zc3h12b	66	82.857	Mus_musculus
ENSORLG00020019033	-	82	67.949	MGP_PahariEiJ_G0031787	Zc3h12b	67	67.988	Mus_pahari
ENSORLG00020019033	-	82	68.966	MGP_SPRETEiJ_G0034413	Zc3h12b	67	68.502	Mus_spretus
ENSORLG00020019033	-	82	68.103	ENSMPUG00000001162	ZC3H12B	58	65.507	Mustela_putorius_furo
ENSORLG00020019033	-	82	70.690	ENSMLUG00000013635	ZC3H12B	61	66.474	Myotis_lucifugus
ENSORLG00020019033	-	89	66.797	ENSNBRG00000014889	zc3h12b	63	69.912	Neolamprologus_brichardi
ENSORLG00020019033	-	82	69.828	ENSNLEG00000000383	ZC3H12B	70	57.143	Nomascus_leucogenys
ENSORLG00020019033	-	51	84.932	ENSMEUG00000014075	ZC3H12B	61	76.078	Notamacropus_eugenii
ENSORLG00020019033	-	82	70.690	ENSONIG00000012867	zc3h12b	65	66.575	Oreochromis_niloticus
ENSORLG00020019033	-	82	68.670	ENSOCUG00000006130	ZC3H12B	54	76.680	Oryctolagus_cuniculus
ENSORLG00020019033	-	100	97.964	ENSORLG00000009188	-	100	97.964	Oryzias_latipes
ENSORLG00020019033	-	82	69.038	ENSORLG00000009556	zc3h12b	56	68.882	Oryzias_latipes
ENSORLG00020019033	-	82	69.456	ENSORLG00015004818	zc3h12b	55	69.301	Oryzias_latipes_hsok
ENSORLG00020019033	-	100	97.624	ENSORLG00015020619	-	100	97.624	Oryzias_latipes_hsok
ENSORLG00020019033	-	97	96.296	ENSOMEG00000018642	-	100	84.939	Oryzias_melastigma
ENSORLG00020019033	-	82	69.456	ENSOMEG00000005768	zc3h12b	63	62.283	Oryzias_melastigma
ENSORLG00020019033	-	82	69.397	ENSOGAG00000029439	ZC3H12B	66	57.373	Otolemur_garnettii
ENSORLG00020019033	-	82	69.828	ENSOARG00000004959	ZC3H12B	59	67.059	Ovis_aries
ENSORLG00020019033	-	82	69.828	ENSPPAG00000039530	ZC3H12B	70	57.143	Pan_paniscus
ENSORLG00020019033	-	82	69.828	ENSPTRG00000021969	ZC3H12B	70	57.143	Pan_troglodytes
ENSORLG00020019033	-	82	69.828	ENSPANG00000007944	ZC3H12B	70	57.143	Papio_anubis
ENSORLG00020019033	-	81	71.304	ENSPKIG00000012946	zc3h12b	59	71.474	Paramormyrops_kingsleyae
ENSORLG00020019033	-	82	69.528	ENSPKIG00000019893	ZC3H12B	59	69.298	Paramormyrops_kingsleyae
ENSORLG00020019033	-	84	78.151	ENSPKIG00000012595	-	81	48.642	Paramormyrops_kingsleyae
ENSORLG00020019033	-	82	69.828	ENSPSIG00000016853	ZC3H12B	62	71.746	Pelodiscus_sinensis
ENSORLG00020019033	-	82	69.828	ENSPMGG00000006009	zc3h12b	62	68.935	Periophthalmus_magnuspinnatus
ENSORLG00020019033	-	89	64.093	ENSPCIG00000020264	ZC3H12B	67	63.836	Phascolarctos_cinereus
ENSORLG00020019033	-	82	70.259	ENSPFOG00000019365	zc3h12b	59	72.381	Poecilia_formosa
ENSORLG00020019033	-	84	83.682	ENSPLAG00000011687	-	85	79.151	Poecilia_latipinna
ENSORLG00020019033	-	82	70.690	ENSPLAG00000011981	zc3h12b	56	71.118	Poecilia_latipinna
ENSORLG00020019033	-	82	59.483	ENSPMEG00000002552	zc3h12b	58	63.354	Poecilia_mexicana
ENSORLG00020019033	-	82	70.690	ENSPREG00000020794	zc3h12b	59	70.807	Poecilia_reticulata
ENSORLG00020019033	-	53	84.106	ENSPPYG00000020416	ZC3H12B	55	76.654	Pongo_abelii
ENSORLG00020019033	-	53	84.768	ENSPCAG00000016422	ZC3H12B	50	77.075	Procavia_capensis
ENSORLG00020019033	-	82	69.828	ENSPCOG00000020467	ZC3H12B	66	58.696	Propithecus_coquereli
ENSORLG00020019033	-	53	60.920	ENSPVAG00000017352	ZC3H12B	55	61.265	Pteropus_vampyrus
ENSORLG00020019033	-	96	79.598	ENSPNYG00000007151	-	96	78.846	Pundamilia_nyererei
ENSORLG00020019033	-	82	75.000	ENSPNYG00000015874	-	93	66.667	Pundamilia_nyererei
ENSORLG00020019033	-	89	67.188	ENSPNYG00000018012	zc3h12b	64	67.033	Pundamilia_nyererei
ENSORLG00020019033	-	92	65.385	ENSPNAG00000002567	zc3h12b	65	66.022	Pygocentrus_nattereri
ENSORLG00020019033	-	88	76.096	ENSPNAG00000017483	-	73	76.900	Pygocentrus_nattereri
ENSORLG00020019033	-	82	69.397	ENSRNOG00000011508	Zc3h12b	68	68.103	Rattus_norvegicus
ENSORLG00020019033	-	82	69.828	ENSRBIG00000036402	ZC3H12B	69	57.143	Rhinopithecus_bieti
ENSORLG00020019033	-	82	69.828	ENSRROG00000036004	ZC3H12B	69	57.143	Rhinopithecus_roxellana
ENSORLG00020019033	-	82	69.397	ENSSBOG00000004095	ZC3H12B	59	66.471	Saimiri_boliviensis_boliviensis
ENSORLG00020019033	-	86	65.992	ENSSHAG00000006530	ZC3H12B	66	64.706	Sarcophilus_harrisii
ENSORLG00020019033	-	82	69.231	ENSSFOG00015008769	zc3h12b	61	70.717	Scleropages_formosus
ENSORLG00020019033	-	90	65.098	ENSSMAG00000018309	zc3h12b	66	61.832	Scophthalmus_maximus
ENSORLG00020019033	-	90	66.667	ENSSDUG00000014078	zc3h12b	89	64.773	Seriola_dumerili
ENSORLG00020019033	-	90	66.667	ENSSLDG00000018895	zc3h12b	66	64.249	Seriola_lalandi_dorsalis
ENSORLG00020019033	-	51	86.111	ENSSARG00000002292	ZC3H12B	55	58.647	Sorex_araneus
ENSORLG00020019033	-	82	70.690	ENSSPAG00000022460	zc3h12b	60	71.429	Stegastes_partitus
ENSORLG00020019033	-	82	69.828	ENSSSCG00000012367	ZC3H12B	59	68.263	Sus_scrofa
ENSORLG00020019033	-	82	70.259	ENSTGUG00000002846	ZC3H12B	62	71.429	Taeniopygia_guttata
ENSORLG00020019033	-	81	67.382	ENSTRUG00000012186	zc3h12b	67	63.661	Takifugu_rubripes
ENSORLG00020019033	-	84	80.252	ENSTRUG00000015402	-	93	80.480	Takifugu_rubripes
ENSORLG00020019033	-	51	88.276	ENSTNIG00000011828	zc3h12b	55	84.279	Tetraodon_nigroviridis
ENSORLG00020019033	-	82	68.966	ENSUAMG00000005098	ZC3H12B	59	67.365	Ursus_americanus
ENSORLG00020019033	-	82	68.966	ENSUMAG00000017054	ZC3H12B	59	67.365	Ursus_maritimus
ENSORLG00020019033	-	55	80.625	ENSVPAG00000009070	ZC3H12B	56	70.115	Vicugna_pacos
ENSORLG00020019033	-	82	69.828	ENSVVUG00000022686	ZC3H12B	54	70.418	Vulpes_vulpes
ENSORLG00020019033	-	82	56.897	ENSXETG00000017794	zc3h12b	66	54.177	Xenopus_tropicalis
ENSORLG00020019033	-	87	66.667	ENSXCOG00000006151	zc3h12b	63	69.527	Xiphophorus_couchianus
ENSORLG00020019033	-	95	79.279	ENSXCOG00000007996	-	86	82.845	Xiphophorus_couchianus
ENSORLG00020019033	-	82	70.690	ENSXMAG00000018548	zc3h12b	59	71.118	Xiphophorus_maculatus