EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020019116 (Gene tree)
Gene ID: -
Gene Symbol: thrap3a
Alias: -
Full Name: thyroid hormone receptor associated protein 3a
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 12511 bases
Position: chr16:22394426-22406936
Accession: ZDB-GENE-030219-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020033216	THRAP3_BCLAF1	PF15440.6	1.1e-121	1	1
ENSORLP00020018135	THRAP3_BCLAF1	PF15440.6	1.3e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020026902	-	4900	-	ENSORLP00020033216	908 (aa)	-	-
ENSORLT00020026899	-	3216	-	ENSORLP00020018135	873 (aa)	-	-

Gene Model

Click here to download ENSORLG00020019116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020019116	thrap3a	69	36.753	ENSORLG00020016319	thrap3b	93	35.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019116	thrap3a	98	60.953	ENSAPOG00000024453	thrap3a	97	61.775	Acanthochromis_polyacanthus
ENSORLG00020019116	thrap3a	53	37.263	ENSACIG00000015331	thrap3b	91	35.407	Amphilophus_citrinellus
ENSORLG00020019116	thrap3a	84	54.331	ENSACIG00000018110	thrap3a	94	54.090	Amphilophus_citrinellus
ENSORLG00020019116	thrap3a	50	37.939	ENSAOCG00000015572	thrap3b	71	37.189	Amphiprion_ocellaris
ENSORLG00020019116	thrap3a	98	61.224	ENSAOCG00000014738	thrap3a	97	62.089	Amphiprion_ocellaris
ENSORLG00020019116	thrap3a	98	61.067	ENSAPEG00000005696	thrap3a	97	62.002	Amphiprion_percula
ENSORLG00020019116	thrap3a	97	55.859	ENSATEG00000009618	thrap3a	97	55.404	Anabas_testudineus
ENSORLG00020019116	thrap3a	73	45.763	ENSATEG00000006350	thrap3b	91	34.242	Anabas_testudineus
ENSORLG00020019116	thrap3a	98	55.355	ENSACLG00000027851	thrap3a	93	54.853	Astatotilapia_calliptera
ENSORLG00020019116	thrap3a	78	35.890	ENSACLG00000004763	thrap3b	91	36.170	Astatotilapia_calliptera
ENSORLG00020019116	thrap3a	65	39.224	ENSAMXG00000020877	thrap3b	80	35.203	Astyanax_mexicanus
ENSORLG00020019116	thrap3a	96	34.873	ENSAMXG00000001863	thrap3a	92	34.368	Astyanax_mexicanus
ENSORLG00020019116	thrap3a	96	40.767	ENSCSEG00000020325	thrap3a	90	41.367	Cynoglossus_semilaevis
ENSORLG00020019116	thrap3a	96	56.163	ENSCVAG00000017634	thrap3a	98	56.659	Cyprinodon_variegatus
ENSORLG00020019116	thrap3a	71	35.489	ENSCVAG00000001547	thrap3b	70	37.519	Cyprinodon_variegatus
ENSORLG00020019116	thrap3a	98	36.784	ENSDARG00000101989	thrap3a	98	37.168	Danio_rerio
ENSORLG00020019116	thrap3a	98	44.768	ENSELUG00000017733	thrap3a	97	44.241	Esox_lucius
ENSORLG00020019116	thrap3a	96	34.830	ENSELUG00000007499	thrap3b	92	36.156	Esox_lucius
ENSORLG00020019116	thrap3a	94	54.196	ENSFHEG00000000989	thrap3a	93	55.168	Fundulus_heteroclitus
ENSORLG00020019116	thrap3a	85	48.113	ENSGMOG00000006512	thrap3a	98	37.668	Gadus_morhua
ENSORLG00020019116	thrap3a	96	55.064	ENSGAFG00000008649	thrap3a	96	55.439	Gambusia_affinis
ENSORLG00020019116	thrap3a	50	39.246	ENSGAFG00000007090	thrap3b	73	39.955	Gambusia_affinis
ENSORLG00020019116	thrap3a	98	48.973	ENSGACG00000013745	thrap3a	92	49.371	Gasterosteus_aculeatus
ENSORLG00020019116	thrap3a	98	55.693	ENSHBUG00000009602	thrap3a	96	55.141	Haplochromis_burtoni
ENSORLG00020019116	thrap3a	78	36.164	ENSHBUG00000001708	thrap3b	91	36.282	Haplochromis_burtoni
ENSORLG00020019116	thrap3a	70	35.196	ENSHCOG00000004098	thrap3b	71	35.714	Hippocampus_comes
ENSORLG00020019116	thrap3a	69	39.024	ENSIPUG00000005707	thrap3b	72	35.960	Ictalurus_punctatus
ENSORLG00020019116	thrap3a	72	35.532	ENSIPUG00000015339	thrap3a	96	34.251	Ictalurus_punctatus
ENSORLG00020019116	thrap3a	96	56.911	ENSKMAG00000005707	thrap3a	98	62.069	Kryptolebias_marmoratus
ENSORLG00020019116	thrap3a	77	36.248	ENSLBEG00000017803	thrap3b	91	35.132	Labrus_bergylta
ENSORLG00020019116	thrap3a	98	56.497	ENSLBEG00000008813	thrap3a	97	56.803	Labrus_bergylta
ENSORLG00020019116	thrap3a	53	38.124	ENSLACG00000018229	THRAP3	52	37.071	Latimeria_chalumnae
ENSORLG00020019116	thrap3a	98	55.480	ENSMAMG00000007707	thrap3a	96	52.661	Mastacembelus_armatus
ENSORLG00020019116	thrap3a	98	55.355	ENSMZEG00005007212	thrap3a	96	55.028	Maylandia_zebra
ENSORLG00020019116	thrap3a	78	36.164	ENSMZEG00005026309	thrap3b	91	35.889	Maylandia_zebra
ENSORLG00020019116	thrap3a	97	50.780	ENSMMOG00000018587	thrap3a	98	50.388	Mola_mola
ENSORLG00020019116	thrap3a	98	50.679	ENSMALG00000011980	thrap3a	93	49.887	Monopterus_albus
ENSORLG00020019116	thrap3a	51	35.870	ENSMALG00000012582	thrap3b	72	34.143	Monopterus_albus
ENSORLG00020019116	thrap3a	98	55.942	ENSNBRG00000009991	thrap3a	97	55.281	Neolamprologus_brichardi
ENSORLG00020019116	thrap3a	85	58.065	ENSNBRG00000014237	thrap3b	76	44.019	Neolamprologus_brichardi
ENSORLG00020019116	thrap3a	70	37.152	ENSONIG00000013673	thrap3b	96	33.645	Oreochromis_niloticus
ENSORLG00020019116	thrap3a	98	54.586	ENSONIG00000016278	thrap3a	92	55.709	Oreochromis_niloticus
ENSORLG00020019116	thrap3a	69	36.794	ENSORLG00000009543	thrap3b	93	36.161	Oryzias_latipes
ENSORLG00020019116	thrap3a	100	98.458	ENSORLG00000014550	thrap3a	100	98.458	Oryzias_latipes
ENSORLG00020019116	thrap3a	100	98.678	ENSORLG00015004215	thrap3a	100	98.678	Oryzias_latipes_hsok
ENSORLG00020019116	thrap3a	69	36.641	ENSORLG00015007831	thrap3b	71	37.258	Oryzias_latipes_hsok
ENSORLG00020019116	thrap3a	99	82.432	ENSOMEG00000019164	thrap3a	99	82.770	Oryzias_melastigma
ENSORLG00020019116	thrap3a	67	37.697	ENSOMEG00000005716	thrap3b	69	36.747	Oryzias_melastigma
ENSORLG00020019116	thrap3a	75	33.034	ENSPKIG00000003697	thrap3b	88	33.527	Paramormyrops_kingsleyae
ENSORLG00020019116	thrap3a	82	41.753	ENSPKIG00000005150	thrap3a	97	43.341	Paramormyrops_kingsleyae
ENSORLG00020019116	thrap3a	95	55.529	ENSPFOG00000013297	thrap3a	92	56.419	Poecilia_formosa
ENSORLG00020019116	thrap3a	71	36.756	ENSPFOG00000000525	thrap3b	69	37.442	Poecilia_formosa
ENSORLG00020019116	thrap3a	95	55.529	ENSPLAG00000000635	thrap3a	92	56.419	Poecilia_latipinna
ENSORLG00020019116	thrap3a	71	36.756	ENSPLAG00000016521	thrap3b	69	37.442	Poecilia_latipinna
ENSORLG00020019116	thrap3a	71	37.048	ENSPMEG00000009021	thrap3b	69	37.596	Poecilia_mexicana
ENSORLG00020019116	thrap3a	95	55.529	ENSPMEG00000019022	thrap3a	92	56.419	Poecilia_mexicana
ENSORLG00020019116	thrap3a	96	54.801	ENSPREG00000005816	thrap3a	93	55.686	Poecilia_reticulata
ENSORLG00020019116	thrap3a	72	36.538	ENSPREG00000009927	thrap3b	71	35.945	Poecilia_reticulata
ENSORLG00020019116	thrap3a	98	55.468	ENSPNYG00000013314	thrap3a	93	54.770	Pundamilia_nyererei
ENSORLG00020019116	thrap3a	73	35.513	ENSPNAG00000015136	thrap3a	98	35.917	Pygocentrus_nattereri
ENSORLG00020019116	thrap3a	63	40.385	ENSPNAG00000028762	thrap3b	60	40.385	Pygocentrus_nattereri
ENSORLG00020019116	thrap3a	82	40.851	ENSSFOG00015020057	thrap3	93	42.579	Scleropages_formosus
ENSORLG00020019116	thrap3a	97	55.618	ENSSMAG00000003703	thrap3a	93	56.648	Scophthalmus_maximus
ENSORLG00020019116	thrap3a	97	59.502	ENSSDUG00000010132	thrap3a	99	59.181	Seriola_dumerili
ENSORLG00020019116	thrap3a	51	37.339	ENSSDUG00000007054	thrap3b	91	35.658	Seriola_dumerili
ENSORLG00020019116	thrap3a	97	59.683	ENSSLDG00000003306	thrap3a	94	58.937	Seriola_lalandi_dorsalis
ENSORLG00020019116	thrap3a	51	37.339	ENSSLDG00000009210	thrap3b	95	37.152	Seriola_lalandi_dorsalis
ENSORLG00020019116	thrap3a	97	59.364	ENSSPAG00000017651	thrap3a	97	61.092	Stegastes_partitus
ENSORLG00020019116	thrap3a	99	47.624	ENSTRUG00000010702	thrap3a	96	47.333	Takifugu_rubripes
ENSORLG00020019116	thrap3a	94	45.590	ENSTNIG00000012194	thrap3a	94	46.437	Tetraodon_nigroviridis
ENSORLG00020019116	thrap3a	95	31.243	ENSTNIG00000004582	thrap3b	93	31.237	Tetraodon_nigroviridis
ENSORLG00020019116	thrap3a	94	51.193	ENSXCOG00000001569	thrap3a	92	51.675	Xiphophorus_couchianus
ENSORLG00020019116	thrap3a	72	35.917	ENSXMAG00000017962	thrap3b	71	37.178	Xiphophorus_maculatus
ENSORLG00020019116	thrap3a	96	55.233	ENSXMAG00000014797	thrap3a	93	55.841	Xiphophorus_maculatus