EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020019227 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 8580 bases
Position: chr17:8486209-8494788
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020018261	zf-C2H2	PF00096.26	7.6e-18	1	3
ENSORLP00020018261	zf-C2H2	PF00096.26	7.6e-18	2	3
ENSORLP00020018261	zf-C2H2	PF00096.26	7.6e-18	3	3
ENSORLP00020018272	zf-C2H2	PF00096.26	2.5e-17	1	3
ENSORLP00020018272	zf-C2H2	PF00096.26	2.5e-17	2	3
ENSORLP00020018272	zf-C2H2	PF00096.26	2.5e-17	3	3
ENSORLP00020018261	zf-met	PF12874.7	3.5e-10	1	2
ENSORLP00020018261	zf-met	PF12874.7	3.5e-10	2	2
ENSORLP00020018272	zf-met	PF12874.7	1.4e-09	1	2
ENSORLP00020018272	zf-met	PF12874.7	1.4e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020027076	-	897	-	ENSORLP00020018272	298 (aa)	-	-
ENSORLT00020027052	-	774	-	ENSORLP00020018261	257 (aa)	-	-

Gene Model

Click here to download ENSORLG00020019227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020019227	-	77	59.016	ENSORLG00020010560	-	98	49.123
ENSORLG00020019227	-	88	56.061	ENSORLG00020000246	-	99	56.061
ENSORLG00020019227	-	65	48.333	ENSORLG00020018503	-	72	46.296
ENSORLG00020019227	-	63	54.955	ENSORLG00020001707	-	92	55.556
ENSORLG00020019227	-	63	46.988	ENSORLG00020005132	-	97	47.126
ENSORLG00020019227	-	74	51.376	ENSORLG00020017483	-	97	51.376
ENSORLG00020019227	-	94	50.909	ENSORLG00020007599	-	98	50.909
ENSORLG00020019227	-	74	50.588	ENSORLG00020000161	-	92	55.682
ENSORLG00020019227	-	90	51.064	ENSORLG00020010804	-	95	52.941
ENSORLG00020019227	-	91	44.828	ENSORLG00020008018	-	91	46.789
ENSORLG00020019227	-	76	51.765	ENSORLG00020008891	-	99	50.909
ENSORLG00020019227	-	84	48.837	ENSORLG00020008933	-	92	48.837
ENSORLG00020019227	-	51	47.191	ENSORLG00020018791	-	84	47.706
ENSORLG00020019227	-	55	44.340	ENSORLG00020003719	GFI1B	82	44.340
ENSORLG00020019227	-	82	47.706	ENSORLG00020009943	-	96	52.941
ENSORLG00020019227	-	61	52.542	ENSORLG00020018069	-	96	54.955
ENSORLG00020019227	-	50	44.318	ENSORLG00020007967	-	96	46.429
ENSORLG00020019227	-	51	50.000	ENSORLG00020008484	-	85	50.000
ENSORLG00020019227	-	54	44.037	ENSORLG00020016754	-	88	49.123
ENSORLG00020019227	-	73	55.294	ENSORLG00020010636	-	89	55.294
ENSORLG00020019227	-	87	52.632	ENSORLG00020010250	-	86	57.377
ENSORLG00020019227	-	91	53.012	ENSORLG00020010171	-	98	53.012
ENSORLG00020019227	-	66	46.667	ENSORLG00020010038	-	68	46.667
ENSORLG00020019227	-	91	52.941	ENSORLG00020009419	-	98	52.222
ENSORLG00020019227	-	50	55.000	ENSORLG00020011075	-	75	55.000
ENSORLG00020019227	-	92	49.558	ENSORLG00020010950	-	94	45.679
ENSORLG00020019227	-	96	45.455	ENSORLG00020021196	-	90	45.455
ENSORLG00020019227	-	76	55.856	ENSORLG00020017850	-	98	54.054
ENSORLG00020019227	-	61	50.000	ENSORLG00020017164	-	99	53.659
ENSORLG00020019227	-	59	42.593	ENSORLG00020018051	prdm5	84	46.364
ENSORLG00020019227	-	51	54.545	ENSORLG00020010020	-	69	54.545
ENSORLG00020019227	-	93	44.048	ENSORLG00020000639	-	100	43.038
ENSORLG00020019227	-	75	53.968	ENSORLG00020008346	-	96	53.968
ENSORLG00020019227	-	75	52.727	ENSORLG00020020419	-	99	53.398
ENSORLG00020019227	-	58	45.556	ENSORLG00020018685	znf319b	81	41.071
ENSORLG00020019227	-	51	46.835	ENSORLG00020018495	-	57	48.113
ENSORLG00020019227	-	50	50.459	ENSORLG00020000481	-	80	53.153
ENSORLG00020019227	-	71	50.617	ENSORLG00020010647	-	89	50.617
ENSORLG00020019227	-	82	54.286	ENSORLG00020004370	-	97	54.286
ENSORLG00020019227	-	56	53.153	ENSORLG00020017528	-	74	53.704
ENSORLG00020019227	-	73	50.962	ENSORLG00020006148	-	79	50.962
ENSORLG00020019227	-	51	47.368	ENSORLG00020006144	-	76	48.810
ENSORLG00020019227	-	99	51.181	ENSORLG00020008240	-	90	51.181
ENSORLG00020019227	-	52	53.846	ENSORLG00020017514	-	72	53.846
ENSORLG00020019227	-	61	46.591	ENSORLG00020009139	-	98	46.226
ENSORLG00020019227	-	59	46.341	ENSORLG00020001912	znf236	53	49.091
ENSORLG00020019227	-	90	50.000	ENSORLG00020002128	-	79	50.000
ENSORLG00020019227	-	51	53.012	ENSORLG00020007074	-	92	53.913
ENSORLG00020019227	-	80	51.351	ENSORLG00020015703	-	82	51.351
ENSORLG00020019227	-	82	48.684	ENSORLG00020009857	-	96	52.727
ENSORLG00020019227	-	74	50.909	ENSORLG00020010880	-	90	50.909
ENSORLG00020019227	-	74	50.459	ENSORLG00020016666	-	92	43.902
ENSORLG00020019227	-	76	47.619	ENSORLG00020016037	-	93	50.459
ENSORLG00020019227	-	69	55.556	ENSORLG00020009184	-	99	55.556
ENSORLG00020019227	-	52	41.758	ENSORLG00020004889	ZNF319	67	41.964
ENSORLG00020019227	-	51	51.190	ENSORLG00020009089	-	55	54.217

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019227	-	74	50.459	ENSAPOG00000019138	-	80	50.459	Acanthochromis_polyacanthus
ENSORLG00020019227	-	94	46.789	ENSACIG00000004641	-	96	46.789	Amphilophus_citrinellus
ENSORLG00020019227	-	62	33.051	ENSAOCG00000006744	-	87	33.628	Amphiprion_ocellaris
ENSORLG00020019227	-	77	50.000	ENSAPEG00000001556	-	85	50.000	Amphiprion_percula
ENSORLG00020019227	-	71	50.000	ENSAPEG00000018762	-	56	50.000	Amphiprion_percula
ENSORLG00020019227	-	61	42.857	ENSATEG00000018931	-	86	42.857	Anabas_testudineus
ENSORLG00020019227	-	61	44.681	ENSACLG00000005694	-	51	42.742	Astatotilapia_calliptera
ENSORLG00020019227	-	50	54.348	ENSACLG00000011658	-	82	54.348	Astatotilapia_calliptera
ENSORLG00020019227	-	70	44.578	ENSCVAG00000003250	-	67	44.578	Cyprinodon_variegatus
ENSORLG00020019227	-	95	44.444	ENSCVAG00000006484	-	96	50.602	Cyprinodon_variegatus
ENSORLG00020019227	-	77	43.860	ENSCVAG00000006653	-	89	47.748	Cyprinodon_variegatus
ENSORLG00020019227	-	56	40.698	ENSCVAG00000020141	-	74	47.059	Cyprinodon_variegatus
ENSORLG00020019227	-	51	48.148	ENSELUG00000024007	-	65	48.333	Esox_lucius
ENSORLG00020019227	-	64	44.037	ENSELUG00000020882	-	66	44.737	Esox_lucius
ENSORLG00020019227	-	74	50.602	ENSGAFG00000001879	-	93	50.602	Gambusia_affinis
ENSORLG00020019227	-	94	52.273	ENSGAFG00000008204	-	96	52.273	Gambusia_affinis
ENSORLG00020019227	-	94	50.538	ENSGAFG00000011998	-	96	50.538	Gambusia_affinis
ENSORLG00020019227	-	92	45.361	ENSHCOG00000019389	-	98	45.361	Hippocampus_comes
ENSORLG00020019227	-	97	41.071	ENSHCOG00000008213	-	94	41.071	Hippocampus_comes
ENSORLG00020019227	-	63	39.744	ENSHCOG00000008227	-	94	39.583	Hippocampus_comes
ENSORLG00020019227	-	52	55.000	ENSHCOG00000015497	-	79	55.000	Hippocampus_comes
ENSORLG00020019227	-	51	44.737	ENSKMAG00000007699	-	56	43.038	Kryptolebias_marmoratus
ENSORLG00020019227	-	50	39.560	ENSKMAG00000014184	-	53	37.383	Kryptolebias_marmoratus
ENSORLG00020019227	-	50	48.052	ENSLBEG00000006161	-	83	48.052	Labrus_bergylta
ENSORLG00020019227	-	50	43.590	ENSLBEG00000017424	-	97	43.590	Labrus_bergylta
ENSORLG00020019227	-	51	42.748	ENSLBEG00000007106	-	68	50.000	Labrus_bergylta
ENSORLG00020019227	-	94	40.580	ENSLBEG00000011210	-	85	42.045	Labrus_bergylta
ENSORLG00020019227	-	54	42.857	ENSLBEG00000001132	-	72	44.643	Labrus_bergylta
ENSORLG00020019227	-	56	45.631	ENSLOCG00000004208	-	98	47.619	Lepisosteus_oculatus
ENSORLG00020019227	-	57	44.048	ENSMAMG00000017939	-	73	43.373	Mastacembelus_armatus
ENSORLG00020019227	-	63	39.683	ENSMZEG00005013907	-	71	49.123	Maylandia_zebra
ENSORLG00020019227	-	94	33.228	ENSMMOG00000017592	-	92	31.173	Mola_mola
ENSORLG00020019227	-	56	43.478	ENSMALG00000004279	-	77	43.119	Monopterus_albus
ENSORLG00020019227	-	73	43.750	ENSNBRG00000006112	-	57	39.175	Neolamprologus_brichardi
ENSORLG00020019227	-	69	45.946	ENSONIG00000007967	-	65	45.946	Oreochromis_niloticus
ENSORLG00020019227	-	63	48.148	ENSONIG00000005050	-	84	44.144	Oreochromis_niloticus
ENSORLG00020019227	-	81	44.118	ENSORLG00000002268	-	87	44.330	Oryzias_latipes
ENSORLG00020019227	-	65	86.228	ENSORLG00000021885	-	80	86.747	Oryzias_latipes
ENSORLG00020019227	-	74	93.158	ENSORLG00015018099	-	89	94.118	Oryzias_latipes_hsok
ENSORLG00020019227	-	54	46.237	ENSPMGG00000002455	-	87	46.364	Periophthalmus_magnuspinnatus
ENSORLG00020019227	-	56	48.276	ENSPMGG00000007051	-	72	48.276	Periophthalmus_magnuspinnatus
ENSORLG00020019227	-	61	40.000	ENSPMAG00000002022	-	100	44.737	Petromyzon_marinus
ENSORLG00020019227	-	55	35.185	ENSPMAG00000004189	-	96	43.750	Petromyzon_marinus
ENSORLG00020019227	-	96	44.248	ENSPFOG00000009491	-	99	44.248	Poecilia_formosa
ENSORLG00020019227	-	51	41.346	ENSPLAG00000014832	-	90	42.169	Poecilia_latipinna
ENSORLG00020019227	-	75	48.193	ENSPLAG00000010067	-	63	48.193	Poecilia_latipinna
ENSORLG00020019227	-	51	42.202	ENSPLAG00000008941	-	91	43.636	Poecilia_latipinna
ENSORLG00020019227	-	51	42.202	ENSPMEG00000005210	-	93	41.346	Poecilia_mexicana
ENSORLG00020019227	-	94	49.123	ENSPMEG00000024117	-	99	49.123	Poecilia_mexicana
ENSORLG00020019227	-	95	62.162	ENSPREG00000008907	-	80	62.162	Poecilia_reticulata
ENSORLG00020019227	-	51	39.506	ENSPNAG00000005946	-	94	36.667	Pygocentrus_nattereri
ENSORLG00020019227	-	52	47.727	ENSSMAG00000013291	-	91	49.180	Scophthalmus_maximus
ENSORLG00020019227	-	76	35.021	ENSSDUG00000020774	-	75	35.021	Seriola_dumerili
ENSORLG00020019227	-	91	37.975	ENSSDUG00000000905	-	88	37.975	Seriola_dumerili
ENSORLG00020019227	-	56	45.946	ENSSDUG00000013048	-	53	45.946	Seriola_dumerili
ENSORLG00020019227	-	60	43.269	ENSXETG00000012506	znf91	99	45.000	Xenopus_tropicalis
ENSORLG00020019227	-	56	46.552	ENSXCOG00000003441	-	64	45.902	Xiphophorus_couchianus
ENSORLG00020019227	-	71	38.732	ENSXCOG00000020768	-	85	39.416	Xiphophorus_couchianus
ENSORLG00020019227	-	51	41.346	ENSXMAG00000012936	-	92	41.346	Xiphophorus_maculatus