EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020019231 (Gene tree)
Gene ID: -
Gene Symbol: tdrd1
Alias: -
Full Name: Oryzias latipes tudor domain containing 1 (tdrd1)%2C mRNA.
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 19749 bases
Position: chr19:4690670-4710418
Accession: NM_001122929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020033254	TUDOR	PF00567.24	1.6e-107	1	4
ENSORLP00020033254	TUDOR	PF00567.24	1.6e-107	2	4
ENSORLP00020033254	TUDOR	PF00567.24	1.6e-107	3	4
ENSORLP00020033254	TUDOR	PF00567.24	1.6e-107	4	4
ENSORLP00020033255	TUDOR	PF00567.24	2e-107	1	4
ENSORLP00020033255	TUDOR	PF00567.24	2e-107	2	4
ENSORLP00020033255	TUDOR	PF00567.24	2e-107	3	4
ENSORLP00020033255	TUDOR	PF00567.24	2e-107	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020026988	-	3578	-	ENSORLP00020033255	1133 (aa)	-	-
ENSORLT00020026946	-	3370	-	ENSORLP00020033254	1048 (aa)	-	-

Gene Model

Click here to download ENSORLG00020019231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019231's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020019231	tdrd1	82	33.333	ENSORLG00020005897	amh	69	34.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019231	tdrd1	97	34.067	ENSG00000095627	TDRD1	82	35.944	Homo_sapiens
ENSORLG00020019231	tdrd1	99	54.609	ENSAPOG00000023199	tdrd1	99	54.957	Acanthochromis_polyacanthus
ENSORLG00020019231	tdrd1	91	36.410	ENSAMEG00000015182	TDRD1	81	36.410	Ailuropoda_melanoleuca
ENSORLG00020019231	tdrd1	99	55.488	ENSACIG00000010576	tdrd1	97	55.488	Amphilophus_citrinellus
ENSORLG00020019231	tdrd1	98	60.994	ENSAOCG00000007059	tdrd1	99	51.764	Amphiprion_ocellaris
ENSORLG00020019231	tdrd1	99	55.864	ENSAPEG00000017049	tdrd1	98	56.038	Amphiprion_percula
ENSORLG00020019231	tdrd1	96	58.957	ENSATEG00000021627	tdrd1	94	57.431	Anabas_testudineus
ENSORLG00020019231	tdrd1	92	34.813	ENSAPLG00000012609	TDRD1	92	34.813	Anas_platyrhynchos
ENSORLG00020019231	tdrd1	94	34.490	ENSACAG00000009854	TDRD1	86	34.490	Anolis_carolinensis
ENSORLG00020019231	tdrd1	90	36.510	ENSANAG00000035710	TDRD1	81	36.645	Aotus_nancymaae
ENSORLG00020019231	tdrd1	99	53.109	ENSACLG00000014107	tdrd1	99	53.109	Astatotilapia_calliptera
ENSORLG00020019231	tdrd1	99	43.003	ENSAMXG00000015146	tdrd1	99	43.003	Astyanax_mexicanus
ENSORLG00020019231	tdrd1	95	35.615	ENSBTAG00000006855	TDRD1	83	34.341	Bos_taurus
ENSORLG00020019231	tdrd1	97	34.130	ENSCJAG00000019270	TDRD1	84	34.130	Callithrix_jacchus
ENSORLG00020019231	tdrd1	98	34.128	ENSCAFG00000011266	TDRD1	87	33.364	Canis_familiaris
ENSORLG00020019231	tdrd1	98	34.160	ENSCAFG00020012373	TDRD1	86	33.364	Canis_lupus_dingo
ENSORLG00020019231	tdrd1	92	35.383	ENSCHIG00000012766	TDRD1	82	35.383	Capra_hircus
ENSORLG00020019231	tdrd1	95	36.004	ENSTSYG00000004935	TDRD1	81	36.004	Carlito_syrichta
ENSORLG00020019231	tdrd1	91	34.706	ENSCPOG00000004190	TDRD1	81	34.706	Cavia_porcellus
ENSORLG00020019231	tdrd1	92	35.931	ENSCCAG00000027375	TDRD1	82	36.977	Cebus_capucinus
ENSORLG00020019231	tdrd1	92	35.366	ENSCATG00000035999	TDRD1	83	35.366	Cercocebus_atys
ENSORLG00020019231	tdrd1	91	35.678	ENSCLAG00000003935	TDRD1	81	35.678	Chinchilla_lanigera
ENSORLG00020019231	tdrd1	92	35.223	ENSCSAG00000005071	TDRD1	81	35.223	Chlorocebus_sabaeus
ENSORLG00020019231	tdrd1	95	47.445	ENSCHOG00000001690	TDRD1	71	47.445	Choloepus_hoffmanni
ENSORLG00020019231	tdrd1	95	38.145	ENSCPBG00000003780	TDRD1	82	38.145	Chrysemys_picta_bellii
ENSORLG00020019231	tdrd1	92	35.461	ENSCANG00000035172	TDRD1	81	36.481	Colobus_angolensis_palliatus
ENSORLG00020019231	tdrd1	91	35.040	ENSCGRG00001004632	Tdrd1	85	35.040	Cricetulus_griseus_chok1gshd
ENSORLG00020019231	tdrd1	97	33.238	ENSCGRG00000004981	Tdrd1	84	33.238	Cricetulus_griseus_crigri
ENSORLG00020019231	tdrd1	96	47.563	ENSCSEG00000006983	tdrd1	98	46.852	Cynoglossus_semilaevis
ENSORLG00020019231	tdrd1	92	53.711	ENSCVAG00000020980	tdrd1	97	52.994	Cyprinodon_variegatus
ENSORLG00020019231	tdrd1	99	42.736	ENSDARG00000007465	tdrd1	99	42.736	Danio_rerio
ENSORLG00020019231	tdrd1	91	36.783	ENSDNOG00000012114	TDRD1	80	36.885	Dasypus_novemcinctus
ENSORLG00020019231	tdrd1	92	35.562	ENSDORG00000009986	Tdrd1	85	34.897	Dipodomys_ordii
ENSORLG00020019231	tdrd1	92	32.551	ENSETEG00000020143	TDRD1	83	32.755	Echinops_telfairi
ENSORLG00020019231	tdrd1	56	34.783	ENSEBUG00000003519	-	96	34.783	Eptatretus_burgeri
ENSORLG00020019231	tdrd1	92	34.549	ENSEASG00005014802	TDRD1	85	34.858	Equus_asinus_asinus
ENSORLG00020019231	tdrd1	92	36.788	ENSECAG00000009748	TDRD1	81	36.788	Equus_caballus
ENSORLG00020019231	tdrd1	90	34.805	ENSEEUG00000010076	TDRD1	82	34.805	Erinaceus_europaeus
ENSORLG00020019231	tdrd1	99	45.394	ENSELUG00000024364	tdrd1	99	45.394	Esox_lucius
ENSORLG00020019231	tdrd1	92	35.507	ENSFCAG00000000632	TDRD1	82	35.607	Felis_catus
ENSORLG00020019231	tdrd1	83	33.985	ENSFALG00000002237	TDRD1	88	33.382	Ficedula_albicollis
ENSORLG00020019231	tdrd1	91	35.300	ENSFDAG00000013225	TDRD1	81	35.300	Fukomys_damarensis
ENSORLG00020019231	tdrd1	98	43.089	ENSFHEG00000009203	tdrd1	99	43.427	Fundulus_heteroclitus
ENSORLG00020019231	tdrd1	83	48.148	ENSGMOG00000016797	-	69	48.148	Gadus_morhua
ENSORLG00020019231	tdrd1	92	33.838	ENSGALG00000046180	TDRD1	90	33.497	Gallus_gallus
ENSORLG00020019231	tdrd1	98	52.783	ENSGAFG00000002668	tdrd1	98	51.593	Gambusia_affinis
ENSORLG00020019231	tdrd1	89	56.100	ENSGACG00000006590	tdrd1	100	56.100	Gasterosteus_aculeatus
ENSORLG00020019231	tdrd1	97	34.258	ENSGGOG00000004250	TDRD1	83	34.258	Gorilla_gorilla
ENSORLG00020019231	tdrd1	99	53.159	ENSHBUG00000005216	tdrd1	98	53.159	Haplochromis_burtoni
ENSORLG00020019231	tdrd1	90	34.186	ENSHGLG00000010877	TDRD1	83	34.186	Heterocephalus_glaber_female
ENSORLG00020019231	tdrd1	89	36.780	ENSHGLG00100013857	TDRD1	85	36.780	Heterocephalus_glaber_male
ENSORLG00020019231	tdrd1	99	41.509	ENSHCOG00000002840	tdrd1	99	41.795	Hippocampus_comes
ENSORLG00020019231	tdrd1	99	44.549	ENSIPUG00000017232	tdrd1	99	44.549	Ictalurus_punctatus
ENSORLG00020019231	tdrd1	97	34.937	ENSSTOG00000003221	TDRD1	85	36.120	Ictidomys_tridecemlineatus
ENSORLG00020019231	tdrd1	98	35.322	ENSJJAG00000014720	Tdrd1	89	33.807	Jaculus_jaculus
ENSORLG00020019231	tdrd1	92	60.041	ENSKMAG00000018558	tdrd1	97	58.447	Kryptolebias_marmoratus
ENSORLG00020019231	tdrd1	99	55.932	ENSLBEG00000004161	tdrd1	97	56.255	Labrus_bergylta
ENSORLG00020019231	tdrd1	92	35.513	ENSLACG00000011559	TDRD1	86	35.170	Latimeria_chalumnae
ENSORLG00020019231	tdrd1	97	40.701	ENSLOCG00000012030	tdrd1	100	41.918	Lepisosteus_oculatus
ENSORLG00020019231	tdrd1	84	35.578	ENSLAFG00000011575	TDRD1	93	35.546	Loxodonta_africana
ENSORLG00020019231	tdrd1	92	35.685	ENSMFAG00000043487	TDRD1	81	36.713	Macaca_fascicularis
ENSORLG00020019231	tdrd1	92	35.685	ENSMMUG00000022517	TDRD1	81	36.713	Macaca_mulatta
ENSORLG00020019231	tdrd1	92	35.569	ENSMNEG00000031108	TDRD1	81	36.598	Macaca_nemestrina
ENSORLG00020019231	tdrd1	92	35.526	ENSMLEG00000032281	TDRD1	81	36.549	Mandrillus_leucophaeus
ENSORLG00020019231	tdrd1	94	58.391	ENSMAMG00000015287	tdrd1	99	54.822	Mastacembelus_armatus
ENSORLG00020019231	tdrd1	99	53.120	ENSMZEG00005025315	tdrd1	99	53.120	Maylandia_zebra
ENSORLG00020019231	tdrd1	92	34.929	ENSMGAG00000011067	TDRD1	100	34.929	Meleagris_gallopavo
ENSORLG00020019231	tdrd1	81	36.949	ENSMAUG00000012164	Tdrd1	78	37.157	Mesocricetus_auratus
ENSORLG00020019231	tdrd1	97	34.575	ENSMICG00000016190	TDRD1	85	33.577	Microcebus_murinus
ENSORLG00020019231	tdrd1	97	34.612	ENSMOCG00000022360	Tdrd1	90	33.217	Microtus_ochrogaster
ENSORLG00020019231	tdrd1	99	54.087	ENSMMOG00000014068	tdrd1	99	54.087	Mola_mola
ENSORLG00020019231	tdrd1	95	36.117	ENSMODG00000009788	TDRD1	85	36.249	Monodelphis_domestica
ENSORLG00020019231	tdrd1	99	52.422	ENSMALG00000022115	tdrd1	98	53.533	Monopterus_albus
ENSORLG00020019231	tdrd1	92	34.778	MGP_CAROLIEiJ_G0023095	Tdrd1	84	34.879	Mus_caroli
ENSORLG00020019231	tdrd1	92	35.223	ENSMUSG00000025081	Tdrd1	84	35.324	Mus_musculus
ENSORLG00020019231	tdrd1	92	35.318	MGP_PahariEiJ_G0014583	Tdrd1	86	34.466	Mus_pahari
ENSORLG00020019231	tdrd1	92	34.712	MGP_SPRETEiJ_G0024016	Tdrd1	84	34.813	Mus_spretus
ENSORLG00020019231	tdrd1	92	34.497	ENSMPUG00000001987	TDRD1	82	34.531	Mustela_putorius_furo
ENSORLG00020019231	tdrd1	92	34.144	ENSNGAG00000015231	Tdrd1	84	34.144	Nannospalax_galili
ENSORLG00020019231	tdrd1	99	53.513	ENSNBRG00000017920	tdrd1	98	53.513	Neolamprologus_brichardi
ENSORLG00020019231	tdrd1	97	32.853	ENSNLEG00000016228	TDRD1	83	32.853	Nomascus_leucogenys
ENSORLG00020019231	tdrd1	93	33.500	ENSMEUG00000007717	TDRD1	83	33.500	Notamacropus_eugenii
ENSORLG00020019231	tdrd1	92	36.072	ENSOPRG00000009180	TDRD1	86	35.484	Ochotona_princeps
ENSORLG00020019231	tdrd1	93	35.000	ENSODEG00000011965	TDRD1	85	35.000	Octodon_degus
ENSORLG00020019231	tdrd1	99	55.628	ENSONIG00000016382	tdrd1	99	54.830	Oreochromis_niloticus
ENSORLG00020019231	tdrd1	99	33.607	ENSOANG00000001562	TDRD1	91	33.607	Ornithorhynchus_anatinus
ENSORLG00020019231	tdrd1	92	35.721	ENSOCUG00000025327	TDRD1	84	35.721	Oryctolagus_cuniculus
ENSORLG00020019231	tdrd1	99	98.209	ENSORLG00000004833	tdrd1	99	98.297	Oryzias_latipes
ENSORLG00020019231	tdrd1	100	97.264	ENSORLG00015017184	tdrd1	100	97.264	Oryzias_latipes_hsok
ENSORLG00020019231	tdrd1	99	71.611	ENSOMEG00000023637	tdrd1	99	70.976	Oryzias_melastigma
ENSORLG00020019231	tdrd1	97	34.758	ENSOGAG00000001370	TDRD1	85	33.758	Otolemur_garnettii
ENSORLG00020019231	tdrd1	92	35.282	ENSOARG00000014200	-	83	34.859	Ovis_aries
ENSORLG00020019231	tdrd1	97	34.067	ENSPPAG00000041621	TDRD1	83	34.067	Pan_paniscus
ENSORLG00020019231	tdrd1	92	35.241	ENSPPRG00000000191	TDRD1	82	35.377	Panthera_pardus
ENSORLG00020019231	tdrd1	92	35.700	ENSPTIG00000010264	TDRD1	82	36.763	Panthera_tigris_altaica
ENSORLG00020019231	tdrd1	97	34.067	ENSPTRG00000002958	TDRD1	83	34.067	Pan_troglodytes
ENSORLG00020019231	tdrd1	92	35.484	ENSPANG00000020752	TDRD1	84	35.484	Papio_anubis
ENSORLG00020019231	tdrd1	97	41.165	ENSPKIG00000010586	tdrd1	93	39.946	Paramormyrops_kingsleyae
ENSORLG00020019231	tdrd1	98	34.783	ENSPSIG00000014655	TDRD1	84	34.783	Pelodiscus_sinensis
ENSORLG00020019231	tdrd1	93	46.971	ENSPMGG00000018890	tdrd1	99	46.971	Periophthalmus_magnuspinnatus
ENSORLG00020019231	tdrd1	92	35.843	ENSPEMG00000004582	Tdrd1	82	35.923	Peromyscus_maniculatus_bairdii
ENSORLG00020019231	tdrd1	80	34.043	ENSPMAG00000004416	-	100	34.043	Petromyzon_marinus
ENSORLG00020019231	tdrd1	93	35.859	ENSPCIG00000009739	TDRD1	83	36.172	Phascolarctos_cinereus
ENSORLG00020019231	tdrd1	94	54.800	ENSPFOG00000002145	tdrd1	99	53.122	Poecilia_formosa
ENSORLG00020019231	tdrd1	99	52.397	ENSPLAG00000010241	tdrd1	98	52.397	Poecilia_latipinna
ENSORLG00020019231	tdrd1	98	53.364	ENSPMEG00000021893	tdrd1	98	52.052	Poecilia_mexicana
ENSORLG00020019231	tdrd1	99	52.709	ENSPREG00000022663	tdrd1	98	52.709	Poecilia_reticulata
ENSORLG00020019231	tdrd1	97	32.757	ENSPPYG00000002671	TDRD1	83	32.757	Pongo_abelii
ENSORLG00020019231	tdrd1	93	34.350	ENSPCAG00000006692	TDRD1	72	34.350	Procavia_capensis
ENSORLG00020019231	tdrd1	97	34.288	ENSPCOG00000026619	TDRD1	81	36.315	Propithecus_coquereli
ENSORLG00020019231	tdrd1	97	34.895	ENSPVAG00000003055	TDRD1	84	34.895	Pteropus_vampyrus
ENSORLG00020019231	tdrd1	99	53.103	ENSPNYG00000001706	tdrd1	98	53.103	Pundamilia_nyererei
ENSORLG00020019231	tdrd1	99	44.358	ENSPNAG00000005831	tdrd1	99	44.358	Pygocentrus_nattereri
ENSORLG00020019231	tdrd1	92	35.294	ENSRNOG00000017064	Tdrd1	89	34.423	Rattus_norvegicus
ENSORLG00020019231	tdrd1	91	35.553	ENSRBIG00000029668	TDRD1	83	36.541	Rhinopithecus_bieti
ENSORLG00020019231	tdrd1	96	34.429	ENSRROG00000043379	TDRD1	83	34.429	Rhinopithecus_roxellana
ENSORLG00020019231	tdrd1	97	34.479	ENSSBOG00000023561	TDRD1	81	36.510	Saimiri_boliviensis_boliviensis
ENSORLG00020019231	tdrd1	98	34.906	ENSSHAG00000014311	TDRD1	86	34.906	Sarcophilus_harrisii
ENSORLG00020019231	tdrd1	92	42.335	ENSSFOG00015022020	tdrd1	92	42.335	Scleropages_formosus
ENSORLG00020019231	tdrd1	95	57.522	ENSSMAG00000019271	tdrd1	98	55.035	Scophthalmus_maximus
ENSORLG00020019231	tdrd1	93	60.747	ENSSDUG00000022012	tdrd1	97	58.073	Seriola_dumerili
ENSORLG00020019231	tdrd1	93	60.545	ENSSLDG00000006423	tdrd1	99	57.014	Seriola_lalandi_dorsalis
ENSORLG00020019231	tdrd1	96	37.692	ENSSARG00000008828	TDRD1	66	37.692	Sorex_araneus
ENSORLG00020019231	tdrd1	91	33.607	ENSSPUG00000005015	TDRD1	83	33.607	Sphenodon_punctatus
ENSORLG00020019231	tdrd1	99	54.214	ENSSPAG00000018805	tdrd1	99	54.214	Stegastes_partitus
ENSORLG00020019231	tdrd1	97	34.288	ENSSSCG00000021075	TDRD1	89	32.896	Sus_scrofa
ENSORLG00020019231	tdrd1	83	36.641	ENSTGUG00000010905	TDRD1	90	36.641	Taeniopygia_guttata
ENSORLG00020019231	tdrd1	96	52.725	ENSTRUG00000012142	tdrd1	100	50.638	Takifugu_rubripes
ENSORLG00020019231	tdrd1	85	49.219	ENSTNIG00000018898	tdrd1	100	45.016	Tetraodon_nigroviridis
ENSORLG00020019231	tdrd1	92	36.952	ENSTBEG00000014417	-	77	36.952	Tupaia_belangeri
ENSORLG00020019231	tdrd1	92	34.347	ENSTTRG00000010147	TDRD1	81	34.347	Tursiops_truncatus
ENSORLG00020019231	tdrd1	91	36.383	ENSUAMG00000009025	TDRD1	80	37.266	Ursus_americanus
ENSORLG00020019231	tdrd1	91	36.815	ENSUMAG00000000705	TDRD1	81	36.815	Ursus_maritimus
ENSORLG00020019231	tdrd1	90	35.707	ENSVPAG00000004000	TDRD1	79	35.810	Vicugna_pacos
ENSORLG00020019231	tdrd1	98	34.351	ENSVVUG00000009750	TDRD1	86	33.547	Vulpes_vulpes
ENSORLG00020019231	tdrd1	83	56.967	ENSXCOG00000006412	tdrd1	99	54.743	Xiphophorus_couchianus
ENSORLG00020019231	tdrd1	92	57.347	ENSXMAG00000008104	tdrd1	94	55.608	Xiphophorus_maculatus