EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020019252 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 18796 bases
Position: chr2:15150238-15169033
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020033292	R3H	PF01424.22	3.4e-13	1	1
ENSORLP00020033305	R3H	PF01424.22	3.6e-13	1	1
ENSORLP00020018300	R3H	PF01424.22	4e-13	1	1
ENSORLP00020018304	R3H	PF01424.22	4.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020034679	-	1794	-	ENSORLP00020018300	414 (aa)	-	-
ENSORLT00020034663	-	1704	-	ENSORLP00020033292	384 (aa)	-	-
ENSORLT00020027127	-	1812	-	ENSORLP00020018304	420 (aa)	-	-
ENSORLT00020034669	-	1722	-	ENSORLP00020033305	390 (aa)	-	-

Gene Model

Click here to download ENSORLG00020019252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019252's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019252	-	93	60.477	ENSG00000048991	R3HDM1	97	65.125	Homo_sapiens
ENSORLG00020019252	-	83	69.159	ENSACIG00000018791	-	62	67.868	Amphilophus_citrinellus
ENSORLG00020019252	-	93	60.766	ENSCAFG00020016119	R3HDM1	74	59.712	Canis_lupus_dingo
ENSORLG00020019252	-	67	53.584	ENSCAPG00000013043	-	100	53.584	Cavia_aperea
ENSORLG00020019252	-	93	58.134	ENSCPOG00000012784	R3HDM1	100	62.116	Cavia_porcellus
ENSORLG00020019252	-	93	59.569	ENSCLAG00000007962	R3HDM1	100	64.505	Chinchilla_lanigera
ENSORLG00020019252	-	93	60.526	ENSCGRG00000012080	R3hdm1	100	64.846	Cricetulus_griseus_crigri
ENSORLG00020019252	-	67	63.514	ENSDORG00000027689	-	100	63.514	Dipodomys_ordii
ENSORLG00020019252	-	82	48.901	ENSEBUG00000014746	arpp21	52	49.041	Eptatretus_burgeri
ENSORLG00020019252	-	93	60.048	ENSFDAG00000016478	R3HDM1	100	65.188	Fukomys_damarensis
ENSORLG00020019252	-	93	82.872	ENSHBUG00000015737	R3HDM1	73	80.872	Haplochromis_burtoni
ENSORLG00020019252	-	93	60.192	ENSHGLG00000015718	R3HDM1	100	64.726	Heterocephalus_glaber_female
ENSORLG00020019252	-	93	60.432	ENSHGLG00100003184	-	100	65.068	Heterocephalus_glaber_male
ENSORLG00020019252	-	92	73.481	ENSHCOG00000013366	r3hdm1	70	75.385	Hippocampus_comes
ENSORLG00020019252	-	93	60.287	ENSSTOG00000007572	R3HDM1	100	64.846	Ictidomys_tridecemlineatus
ENSORLG00020019252	-	67	64.505	ENSJJAG00000018208	-	100	64.505	Jaculus_jaculus
ENSORLG00020019252	-	52	84.298	ENSKMAG00000013373	-	65	84.298	Kryptolebias_marmoratus
ENSORLG00020019252	-	92	80.939	ENSLBEG00000027981	-	83	78.442	Labrus_bergylta
ENSORLG00020019252	-	93	60.287	ENSMAUG00000010315	R3hdm1	100	64.846	Mesocricetus_auratus
ENSORLG00020019252	-	88	59.446	ENSMOCG00000019833	-	100	64.505	Microtus_ochrogaster
ENSORLG00020019252	-	93	60.526	MGP_CAROLIEiJ_G0014543	R3hdm1	100	65.188	Mus_caroli
ENSORLG00020019252	-	93	60.526	ENSMUSG00000056211	R3hdm1	100	65.188	Mus_musculus
ENSORLG00020019252	-	93	60.047	MGP_PahariEiJ_G0027779	R3hdm1	100	65.188	Mus_pahari
ENSORLG00020019252	-	93	60.526	MGP_SPRETEiJ_G0015350	R3hdm1	100	65.188	Mus_spretus
ENSORLG00020019252	-	67	63.176	ENSNGAG00000001313	-	100	63.176	Nannospalax_galili
ENSORLG00020019252	-	93	60.526	ENSODEG00000008607	R3HDM1	100	64.846	Octodon_degus
ENSORLG00020019252	-	93	90.955	ENSOMEG00000003882	-	77	88.702	Oryzias_melastigma
ENSORLG00020019252	-	92	62.363	ENSPKIG00000011224	R3HDM1	91	60.804	Paramormyrops_kingsleyae
ENSORLG00020019252	-	76	73.490	ENSPMGG00000011264	-	63	71.704	Periophthalmus_magnuspinnatus
ENSORLG00020019252	-	93	60.048	ENSPEMG00000015187	R3hdm1	100	64.846	Peromyscus_maniculatus_bairdii
ENSORLG00020019252	-	93	82.161	ENSPREG00000007902	r3hdm1	69	82.388	Poecilia_reticulata
ENSORLG00020019252	-	94	82.338	ENSPNYG00000008701	-	99	82.338	Pundamilia_nyererei
ENSORLG00020019252	-	93	61.538	ENSUAMG00000024806	R3HDM1	74	59.524	Ursus_americanus