EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020019256 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: helicase ARIP4
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 58402 bases
Position: chr7:6064390-6122791
Accession: 101167365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020033315	ResIII	PF04851.15	7.5e-08	1	1
ENSORLP00020018235	ResIII	PF04851.15	7.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020027062	-	7416	XM_023956419	ENSORLP00020033315	1493 (aa)	XP_023812187	-
ENSORLT00020027050	-	6997	XM_023956421	ENSORLP00020018235	1471 (aa)	XP_023812189	-

Gene Model

Click here to download ENSORLG00020019256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019256's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020019256	-	97	60.231	ENSORLG00020003470	rad54l2	95	60.041

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019256	-	91	59.213	ENSG00000164080	RAD54L2	94	59.280	Homo_sapiens
ENSORLG00020019256	-	99	78.018	ENSAPOG00000024141	-	99	78.355	Acanthochromis_polyacanthus
ENSORLG00020019256	-	93	58.292	ENSAMEG00000009326	RAD54L2	90	58.653	Ailuropoda_melanoleuca
ENSORLG00020019256	-	93	75.090	ENSACIG00000015932	-	99	75.216	Amphilophus_citrinellus
ENSORLG00020019256	-	85	63.467	ENSACIG00000018079	rad54l2	94	61.459	Amphilophus_citrinellus
ENSORLG00020019256	-	99	78.205	ENSAOCG00000022380	-	99	77.725	Amphiprion_ocellaris
ENSORLG00020019256	-	99	77.279	ENSATEG00000006641	-	99	77.078	Anabas_testudineus
ENSORLG00020019256	-	97	61.330	ENSATEG00000009346	rad54l2	95	61.278	Anabas_testudineus
ENSORLG00020019256	-	94	60.794	ENSAPLG00000002121	RAD54L2	92	61.960	Anas_platyrhynchos
ENSORLG00020019256	-	74	70.942	ENSACAG00000015883	RAD54L2	87	67.369	Anolis_carolinensis
ENSORLG00020019256	-	91	58.776	ENSANAG00000025396	RAD54L2	90	57.925	Aotus_nancymaae
ENSORLG00020019256	-	97	59.799	ENSACLG00000019111	rad54l2	94	60.643	Astatotilapia_calliptera
ENSORLG00020019256	-	99	76.743	ENSACLG00000018296	-	99	77.145	Astatotilapia_calliptera
ENSORLG00020019256	-	90	62.640	ENSAMXG00000013807	rad54l2	88	62.230	Astyanax_mexicanus
ENSORLG00020019256	-	91	59.068	ENSBTAG00000032253	RAD54L2	91	58.106	Bos_taurus
ENSORLG00020019256	-	91	58.965	ENSCJAG00000005575	RAD54L2	87	62.110	Callithrix_jacchus
ENSORLG00020019256	-	91	58.926	ENSCAFG00000010120	RAD54L2	90	58.508	Canis_familiaris
ENSORLG00020019256	-	91	58.926	ENSCAFG00020022320	RAD54L2	90	58.508	Canis_lupus_dingo
ENSORLG00020019256	-	94	56.142	ENSCHIG00000008830	RAD54L2	90	58.683	Capra_hircus
ENSORLG00020019256	-	91	58.588	ENSTSYG00000013200	RAD54L2	90	57.637	Carlito_syrichta
ENSORLG00020019256	-	81	64.423	ENSCAPG00000016465	RAD54L2	86	61.432	Cavia_aperea
ENSORLG00020019256	-	93	58.274	ENSCPOG00000005941	RAD54L2	90	58.598	Cavia_porcellus
ENSORLG00020019256	-	79	58.145	ENSCCAG00000024465	RAD54L2	89	57.461	Cebus_capucinus
ENSORLG00020019256	-	91	58.926	ENSCATG00000039891	RAD54L2	91	58.375	Cercocebus_atys
ENSORLG00020019256	-	93	57.880	ENSCLAG00000008059	RAD54L2	90	57.827	Chinchilla_lanigera
ENSORLG00020019256	-	91	58.926	ENSCSAG00000014027	RAD54L2	90	58.065	Chlorocebus_sabaeus
ENSORLG00020019256	-	97	59.867	ENSCPBG00000016624	RAD54L2	96	60.302	Chrysemys_picta_bellii
ENSORLG00020019256	-	69	50.719	ENSCING00000009208	-	95	50.849	Ciona_intestinalis
ENSORLG00020019256	-	91	58.671	ENSCANG00000036093	RAD54L2	91	58.303	Colobus_angolensis_palliatus
ENSORLG00020019256	-	90	58.828	ENSCGRG00000007921	Rad54l2	90	58.357	Cricetulus_griseus_crigri
ENSORLG00020019256	-	97	58.538	ENSCSEG00000001740	rad54l2	92	58.786	Cynoglossus_semilaevis
ENSORLG00020019256	-	86	75.843	ENSCSEG00000006115	-	100	74.714	Cynoglossus_semilaevis
ENSORLG00020019256	-	95	61.734	ENSCVAG00000017887	rad54l2	94	60.070	Cyprinodon_variegatus
ENSORLG00020019256	-	96	76.783	ENSCVAG00000005376	-	96	76.137	Cyprinodon_variegatus
ENSORLG00020019256	-	90	63.866	ENSDARG00000063031	rad54l2	95	62.393	Danio_rerio
ENSORLG00020019256	-	93	58.163	ENSDNOG00000017359	RAD54L2	93	57.775	Dasypus_novemcinctus
ENSORLG00020019256	-	85	67.458	ENSDORG00000000651	Rad54l2	89	68.029	Dipodomys_ordii
ENSORLG00020019256	-	58	59.434	FBgn0034976	CG4049	57	51.131	Drosophila_melanogaster
ENSORLG00020019256	-	89	58.401	ENSETEG00000013290	RAD54L2	96	57.791	Echinops_telfairi
ENSORLG00020019256	-	70	58.011	ENSEBUG00000001591	rad54l2	74	61.145	Eptatretus_burgeri
ENSORLG00020019256	-	91	58.811	ENSEASG00005012868	RAD54L2	90	58.394	Equus_asinus_asinus
ENSORLG00020019256	-	91	58.521	ENSECAG00000014759	RAD54L2	90	58.394	Equus_caballus
ENSORLG00020019256	-	79	66.102	ENSEEUG00000001759	RAD54L2	83	66.102	Erinaceus_europaeus
ENSORLG00020019256	-	97	67.086	ENSELUG00000011246	RAD54L2	97	66.807	Esox_lucius
ENSORLG00020019256	-	93	58.144	ENSFCAG00000018563	RAD54L2	90	58.424	Felis_catus
ENSORLG00020019256	-	81	66.478	ENSFALG00000008938	RAD54L2	88	67.514	Ficedula_albicollis
ENSORLG00020019256	-	93	58.445	ENSFDAG00000017084	RAD54L2	90	58.101	Fukomys_damarensis
ENSORLG00020019256	-	94	61.817	ENSFHEG00000023241	rad54l2	94	60.402	Fundulus_heteroclitus
ENSORLG00020019256	-	99	77.869	ENSFHEG00000017845	-	99	76.944	Fundulus_heteroclitus
ENSORLG00020019256	-	90	63.650	ENSGMOG00000010674	rad54l2	90	66.586	Gadus_morhua
ENSORLG00020019256	-	94	60.759	ENSGALG00000003243	RAD54L2	89	62.097	Gallus_gallus
ENSORLG00020019256	-	94	62.464	ENSGAFG00000021535	rad54l2	95	60.178	Gambusia_affinis
ENSORLG00020019256	-	98	76.269	ENSGAFG00000002396	-	99	76.418	Gambusia_affinis
ENSORLG00020019256	-	94	61.178	ENSGACG00000001558	rad54l2	96	62.206	Gasterosteus_aculeatus
ENSORLG00020019256	-	87	74.768	ENSGACG00000005642	-	99	74.457	Gasterosteus_aculeatus
ENSORLG00020019256	-	92	61.436	ENSGAGG00000020971	RAD54L2	95	59.943	Gopherus_agassizii
ENSORLG00020019256	-	91	59.213	ENSGGOG00000010032	RAD54L2	91	58.118	Gorilla_gorilla
ENSORLG00020019256	-	99	76.944	ENSHBUG00000018930	-	99	77.413	Haplochromis_burtoni
ENSORLG00020019256	-	97	60.000	ENSHBUG00000012480	rad54l2	94	60.780	Haplochromis_burtoni
ENSORLG00020019256	-	93	58.233	ENSHGLG00000012116	RAD54L2	90	58.125	Heterocephalus_glaber_female
ENSORLG00020019256	-	93	58.233	ENSHGLG00100007205	RAD54L2	90	58.125	Heterocephalus_glaber_male
ENSORLG00020019256	-	97	58.713	ENSHCOG00000007601	rad54l2	93	58.868	Hippocampus_comes
ENSORLG00020019256	-	99	68.577	ENSHCOG00000006741	-	99	68.822	Hippocampus_comes
ENSORLG00020019256	-	94	59.957	ENSIPUG00000019664	rad54l2	94	57.767	Ictalurus_punctatus
ENSORLG00020019256	-	92	58.729	ENSIPUG00000024973	-	95	58.358	Ictalurus_punctatus
ENSORLG00020019256	-	91	59.203	ENSSTOG00000010014	RAD54L2	89	58.755	Ictidomys_tridecemlineatus
ENSORLG00020019256	-	93	57.987	ENSJJAG00000014332	Rad54l2	90	58.321	Jaculus_jaculus
ENSORLG00020019256	-	96	60.271	ENSKMAG00000001976	rad54l2	94	61.362	Kryptolebias_marmoratus
ENSORLG00020019256	-	99	79.386	ENSKMAG00000002931	-	98	79.277	Kryptolebias_marmoratus
ENSORLG00020019256	-	86	75.117	ENSLBEG00000008534	-	99	75.351	Labrus_bergylta
ENSORLG00020019256	-	94	61.750	ENSLBEG00000018779	rad54l2	94	60.873	Labrus_bergylta
ENSORLG00020019256	-	95	56.801	ENSLACG00000016004	RAD54L2	96	56.683	Latimeria_chalumnae
ENSORLG00020019256	-	72	71.735	ENSLOCG00000014222	rad54l2	99	71.055	Lepisosteus_oculatus
ENSORLG00020019256	-	91	58.777	ENSLAFG00000005966	RAD54L2	90	58.196	Loxodonta_africana
ENSORLG00020019256	-	91	58.926	ENSMFAG00000041836	RAD54L2	91	58.375	Macaca_fascicularis
ENSORLG00020019256	-	91	58.969	ENSMMUG00000012002	RAD54L2	90	58.417	Macaca_mulatta
ENSORLG00020019256	-	91	58.926	ENSMNEG00000035063	RAD54L2	92	58.375	Macaca_nemestrina
ENSORLG00020019256	-	91	58.926	ENSMLEG00000034668	RAD54L2	91	58.375	Mandrillus_leucophaeus
ENSORLG00020019256	-	99	75.557	ENSMAMG00000015321	-	99	75.490	Mastacembelus_armatus
ENSORLG00020019256	-	91	68.439	ENSMAMG00000023761	rad54l2	95	66.751	Mastacembelus_armatus
ENSORLG00020019256	-	97	59.906	ENSMZEG00005012584	rad54l2	96	59.875	Maylandia_zebra
ENSORLG00020019256	-	99	76.743	ENSMZEG00005021308	-	99	77.145	Maylandia_zebra
ENSORLG00020019256	-	94	61.236	ENSMGAG00000002911	RAD54L2	89	62.023	Meleagris_gallopavo
ENSORLG00020019256	-	71	67.324	ENSMAUG00000011651	Rad54l2	91	68.665	Mesocricetus_auratus
ENSORLG00020019256	-	98	55.997	ENSMICG00000002777	RAD54L2	86	60.866	Microcebus_murinus
ENSORLG00020019256	-	94	57.261	ENSMOCG00000022448	Rad54l2	91	58.291	Microtus_ochrogaster
ENSORLG00020019256	-	93	60.487	ENSMMOG00000021709	rad54l2	92	61.276	Mola_mola
ENSORLG00020019256	-	94	73.228	ENSMMOG00000016901	-	99	73.209	Mola_mola
ENSORLG00020019256	-	90	61.863	ENSMODG00000011850	RAD54L2	95	60.606	Monodelphis_domestica
ENSORLG00020019256	-	87	75.638	ENSMALG00000015084	-	97	82.332	Monopterus_albus
ENSORLG00020019256	-	93	58.010	MGP_CAROLIEiJ_G0032634	Rad54l2	90	58.148	Mus_caroli
ENSORLG00020019256	-	93	57.939	ENSMUSG00000040661	Rad54l2	90	58.076	Mus_musculus
ENSORLG00020019256	-	93	57.616	MGP_PahariEiJ_G0015502	Rad54l2	90	57.933	Mus_pahari
ENSORLG00020019256	-	93	58.010	MGP_SPRETEiJ_G0033779	Rad54l2	90	58.148	Mus_spretus
ENSORLG00020019256	-	93	58.221	ENSMPUG00000011865	RAD54L2	91	57.640	Mustela_putorius_furo
ENSORLG00020019256	-	91	59.216	ENSMLUG00000004605	RAD54L2	90	58.083	Myotis_lucifugus
ENSORLG00020019256	-	93	58.110	ENSNGAG00000015629	Rad54l2	90	58.435	Nannospalax_galili
ENSORLG00020019256	-	99	76.944	ENSNBRG00000022847	-	99	77.145	Neolamprologus_brichardi
ENSORLG00020019256	-	86	63.926	ENSNBRG00000001937	rad54l2	87	64.659	Neolamprologus_brichardi
ENSORLG00020019256	-	91	59.213	ENSNLEG00000007038	RAD54L2	92	58.118	Nomascus_leucogenys
ENSORLG00020019256	-	90	72.222	ENSMEUG00000009835	RAD54L2	91	72.037	Notamacropus_eugenii
ENSORLG00020019256	-	93	58.233	ENSODEG00000018266	RAD54L2	90	57.959	Octodon_degus
ENSORLG00020019256	-	97	61.268	ENSONIG00000014468	rad54l2	95	60.697	Oreochromis_niloticus
ENSORLG00020019256	-	96	76.993	ENSONIG00000001663	-	98	77.343	Oreochromis_niloticus
ENSORLG00020019256	-	94	61.234	ENSOANG00000012793	RAD54L2	92	61.527	Ornithorhynchus_anatinus
ENSORLG00020019256	-	93	58.245	ENSOCUG00000017577	RAD54L2	90	57.970	Oryctolagus_cuniculus
ENSORLG00020019256	-	96	60.401	ENSORLG00000002276	rad54l2	95	59.426	Oryzias_latipes
ENSORLG00020019256	-	100	98.507	ENSORLG00000002714	-	100	98.507	Oryzias_latipes
ENSORLG00020019256	-	100	98.576	ENSORLG00015013408	-	100	98.576	Oryzias_latipes_hsok
ENSORLG00020019256	-	97	60.190	ENSORLG00015021530	rad54l2	95	59.498	Oryzias_latipes_hsok
ENSORLG00020019256	-	96	60.680	ENSOMEG00000005597	rad54l2	89	62.418	Oryzias_melastigma
ENSORLG00020019256	-	100	88.753	ENSOMEG00000008216	-	100	88.686	Oryzias_melastigma
ENSORLG00020019256	-	74	61.285	ENSOGAG00000012442	RAD54L2	89	62.312	Otolemur_garnettii
ENSORLG00020019256	-	91	58.824	ENSOARG00000007264	RAD54L2	90	58.768	Ovis_aries
ENSORLG00020019256	-	91	59.213	ENSPPAG00000038472	RAD54L2	91	58.118	Pan_paniscus
ENSORLG00020019256	-	93	58.144	ENSPPRG00000010212	RAD54L2	90	58.424	Panthera_pardus
ENSORLG00020019256	-	91	58.841	ENSPTIG00000002240	RAD54L2	90	58.424	Panthera_tigris_altaica
ENSORLG00020019256	-	91	59.213	ENSPTRG00000014974	RAD54L2	91	58.118	Pan_troglodytes
ENSORLG00020019256	-	91	58.926	ENSPANG00000000857	RAD54L2	91	58.375	Papio_anubis
ENSORLG00020019256	-	99	64.266	ENSPKIG00000001065	rad54l2	97	65.387	Paramormyrops_kingsleyae
ENSORLG00020019256	-	69	70.520	ENSPSIG00000014346	RAD54L2	91	71.316	Pelodiscus_sinensis
ENSORLG00020019256	-	94	66.903	ENSPMGG00000000641	-	99	65.031	Periophthalmus_magnuspinnatus
ENSORLG00020019256	-	81	62.819	ENSPMGG00000002208	rad54l2	96	62.428	Periophthalmus_magnuspinnatus
ENSORLG00020019256	-	93	57.687	ENSPEMG00000012051	Rad54l2	90	58.004	Peromyscus_maniculatus_bairdii
ENSORLG00020019256	-	89	61.214	ENSPCIG00000018143	RAD54L2	94	61.315	Phascolarctos_cinereus
ENSORLG00020019256	-	94	62.331	ENSPFOG00000018644	rad54l2	95	60.560	Poecilia_formosa
ENSORLG00020019256	-	99	76.965	ENSPFOG00000000197	-	99	76.965	Poecilia_formosa
ENSORLG00020019256	-	99	76.980	ENSPLAG00000013908	-	99	76.398	Poecilia_latipinna
ENSORLG00020019256	-	94	62.091	ENSPLAG00000006015	rad54l2	95	60.328	Poecilia_latipinna
ENSORLG00020019256	-	99	76.558	ENSPMEG00000009878	-	99	76.558	Poecilia_mexicana
ENSORLG00020019256	-	94	62.642	ENSPMEG00000021535	rad54l2	95	60.697	Poecilia_mexicana
ENSORLG00020019256	-	98	77.213	ENSPREG00000013377	RAD54L2	99	77.018	Poecilia_reticulata
ENSORLG00020019256	-	93	62.232	ENSPREG00000008628	rad54l2	97	63.048	Poecilia_reticulata
ENSORLG00020019256	-	91	59.286	ENSPPYG00000013831	RAD54L2	93	58.190	Pongo_abelii
ENSORLG00020019256	-	74	61.479	ENSPCAG00000011952	RAD54L2	80	61.479	Procavia_capensis
ENSORLG00020019256	-	96	57.329	ENSPCOG00000015983	RAD54L2	85	61.133	Propithecus_coquereli
ENSORLG00020019256	-	99	76.810	ENSPNYG00000011435	-	99	77.212	Pundamilia_nyererei
ENSORLG00020019256	-	85	63.765	ENSPNYG00000020693	rad54l2	88	64.649	Pundamilia_nyererei
ENSORLG00020019256	-	99	62.669	ENSPNAG00000011583	-	97	63.459	Pygocentrus_nattereri
ENSORLG00020019256	-	94	61.533	ENSPNAG00000006451	rad54l2	95	60.491	Pygocentrus_nattereri
ENSORLG00020019256	-	69	66.282	ENSRNOG00000049489	LOC102552166	91	67.624	Rattus_norvegicus
ENSORLG00020019256	-	93	55.109	ENSRNOG00000013570	Rad54l2	90	55.293	Rattus_norvegicus
ENSORLG00020019256	-	91	58.790	ENSRBIG00000032434	RAD54L2	93	57.789	Rhinopithecus_bieti
ENSORLG00020019256	-	91	58.909	ENSRROG00000042309	RAD54L2	92	58.375	Rhinopithecus_roxellana
ENSORLG00020019256	-	93	58.191	ENSSBOG00000002139	RAD54L2	90	58.178	Saimiri_boliviensis_boliviensis
ENSORLG00020019256	-	94	60.083	ENSSHAG00000008604	RAD54L2	92	59.943	Sarcophilus_harrisii
ENSORLG00020019256	-	99	65.906	ENSSFOG00015019014	rad54l2	97	66.388	Scleropages_formosus
ENSORLG00020019256	-	94	60.694	ENSSMAG00000020933	rad54l2	92	60.243	Scophthalmus_maximus
ENSORLG00020019256	-	99	74.139	ENSSMAG00000009978	-	99	73.887	Scophthalmus_maximus
ENSORLG00020019256	-	93	62.202	ENSSDUG00000014268	rad54l2	95	60.982	Seriola_dumerili
ENSORLG00020019256	-	99	77.001	ENSSDUG00000016711	-	99	77.285	Seriola_dumerili
ENSORLG00020019256	-	89	63.879	ENSSLDG00000023959	rad54l2	97	63.390	Seriola_lalandi_dorsalis
ENSORLG00020019256	-	96	74.965	ENSSLDG00000023388	-	99	75.245	Seriola_lalandi_dorsalis
ENSORLG00020019256	-	97	60.870	ENSSPAG00000016532	rad54l2	95	60.926	Stegastes_partitus
ENSORLG00020019256	-	93	77.721	ENSSPAG00000006371	-	99	77.984	Stegastes_partitus
ENSORLG00020019256	-	94	57.622	ENSSSCG00000011425	RAD54L2	85	61.333	Sus_scrofa
ENSORLG00020019256	-	94	60.709	ENSTGUG00000004888	RAD54L2	89	62.555	Taeniopygia_guttata
ENSORLG00020019256	-	99	70.648	ENSTRUG00000011066	-	99	70.418	Takifugu_rubripes
ENSORLG00020019256	-	94	60.692	ENSTRUG00000013962	rad54l2	94	59.749	Takifugu_rubripes
ENSORLG00020019256	-	73	69.854	ENSTNIG00000014694	rad54l2	99	67.127	Tetraodon_nigroviridis
ENSORLG00020019256	-	74	75.978	ENSTNIG00000006049	-	99	76.299	Tetraodon_nigroviridis
ENSORLG00020019256	-	85	58.906	ENSTBEG00000003377	RAD54L2	95	58.508	Tupaia_belangeri
ENSORLG00020019256	-	93	58.375	ENSUAMG00000020891	RAD54L2	93	57.902	Ursus_americanus
ENSORLG00020019256	-	93	58.232	ENSUMAG00000021678	RAD54L2	90	58.593	Ursus_maritimus
ENSORLG00020019256	-	91	58.926	ENSVVUG00000026874	RAD54L2	93	58.508	Vulpes_vulpes
ENSORLG00020019256	-	94	60.409	ENSXETG00000000070	rad54l2	90	61.613	Xenopus_tropicalis
ENSORLG00020019256	-	94	57.898	ENSXCOG00000004961	rad54l2	90	59.803	Xiphophorus_couchianus
ENSORLG00020019256	-	96	73.028	ENSXCOG00000002848	-	99	72.817	Xiphophorus_couchianus
ENSORLG00020019256	-	99	76.558	ENSXMAG00000019370	-	99	76.762	Xiphophorus_maculatus
ENSORLG00020019256	-	94	62.366	ENSXMAG00000017182	rad54l2	97	63.138	Xiphophorus_maculatus