EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020019316 (Gene tree)
Gene ID: -
Gene Symbol: ythdc1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 8712 bases
Position: chr12:119553-128264
Accession: ZDB-GENE-041114-114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020018368	YTH	PF04146.15	1.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020034709	-	3323	-	ENSORLP00020018368	666 (aa)	-	-

Gene Model

Click here to download ENSORLG00020019316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019316's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019316	ythdc1	60	66.988	ENSG00000083896	YTHDC1	56	60.386	Homo_sapiens
ENSORLG00020019316	ythdc1	83	77.936	ENSAPOG00000013997	ythdc1	93	72.370	Acanthochromis_polyacanthus
ENSORLG00020019316	ythdc1	82	76.528	ENSACIG00000019728	ythdc1	91	77.372	Amphilophus_citrinellus
ENSORLG00020019316	ythdc1	95	80.908	ENSAOCG00000000239	ythdc1	94	82.316	Amphiprion_ocellaris
ENSORLG00020019316	ythdc1	84	80.885	ENSAPEG00000000618	ythdc1	88	81.139	Amphiprion_percula
ENSORLG00020019316	ythdc1	83	79.323	ENSATEG00000023007	ythdc1	91	79.679	Anabas_testudineus
ENSORLG00020019316	ythdc1	93	56.072	ENSAPLG00000009921	YTHDC1	50	67.120	Anas_platyrhynchos
ENSORLG00020019316	ythdc1	94	56.058	ENSACAG00000009697	YTHDC1	93	52.161	Anolis_carolinensis
ENSORLG00020019316	ythdc1	60	66.988	ENSANAG00000001522	YTHDC1	56	60.386	Aotus_nancymaae
ENSORLG00020019316	ythdc1	95	81.847	ENSACLG00000019371	ythdc1	94	83.255	Astatotilapia_calliptera
ENSORLG00020019316	ythdc1	94	63.077	ENSAMXG00000006978	ythdc1	92	59.385	Astyanax_mexicanus
ENSORLG00020019316	ythdc1	60	66.988	ENSCJAG00000009934	YTHDC1	56	60.386	Callithrix_jacchus
ENSORLG00020019316	ythdc1	61	68.856	ENSCAFG00020027112	YTHDC1	57	57.370	Canis_lupus_dingo
ENSORLG00020019316	ythdc1	60	66.988	ENSTSYG00000011668	YTHDC1	56	60.386	Carlito_syrichta
ENSORLG00020019316	ythdc1	92	42.462	ENSCAPG00000008722	YTHDC1	89	38.998	Cavia_aperea
ENSORLG00020019316	ythdc1	60	58.696	ENSCPOG00000010929	YTHDC1	92	48.029	Cavia_porcellus
ENSORLG00020019316	ythdc1	60	66.988	ENSCCAG00000035754	YTHDC1	56	60.386	Cebus_capucinus
ENSORLG00020019316	ythdc1	60	66.988	ENSCATG00000036320	YTHDC1	56	60.386	Cercocebus_atys
ENSORLG00020019316	ythdc1	93	55.157	ENSCLAG00000005482	YTHDC1	92	52.402	Chinchilla_lanigera
ENSORLG00020019316	ythdc1	94	58.398	ENSCPBG00000021965	YTHDC1	94	50.837	Chrysemys_picta_bellii
ENSORLG00020019316	ythdc1	60	66.988	ENSCANG00000004769	YTHDC1	56	60.386	Colobus_angolensis_palliatus
ENSORLG00020019316	ythdc1	60	66.747	ENSCGRG00001000816	Ythdc1	56	60.145	Cricetulus_griseus_chok1gshd
ENSORLG00020019316	ythdc1	60	66.747	ENSCGRG00000009807	Ythdc1	56	60.145	Cricetulus_griseus_crigri
ENSORLG00020019316	ythdc1	95	78.783	ENSCSEG00000020404	ythdc1	94	78.315	Cynoglossus_semilaevis
ENSORLG00020019316	ythdc1	95	78.527	ENSCVAG00000022349	ythdc1	94	78.807	Cyprinodon_variegatus
ENSORLG00020019316	ythdc1	94	62.346	ENSDARG00000051953	ythdc1	92	58.025	Danio_rerio
ENSORLG00020019316	ythdc1	60	66.988	ENSDORG00000013045	Ythdc1	92	52.537	Dipodomys_ordii
ENSORLG00020019316	ythdc1	61	68.856	ENSEASG00005018383	YTHDC1	51	67.663	Equus_asinus_asinus
ENSORLG00020019316	ythdc1	76	68.434	ENSECAG00000018303	YTHDC1	60	61.111	Equus_caballus
ENSORLG00020019316	ythdc1	94	59.704	ENSELUG00000014029	ythdc1	92	56.781	Esox_lucius
ENSORLG00020019316	ythdc1	61	68.856	ENSFCAG00000026791	YTHDC1	56	61.111	Felis_catus
ENSORLG00020019316	ythdc1	76	66.667	ENSFALG00000006581	YTHDC1	81	67.120	Ficedula_albicollis
ENSORLG00020019316	ythdc1	60	66.747	ENSFDAG00000018560	YTHDC1	92	52.932	Fukomys_damarensis
ENSORLG00020019316	ythdc1	80	62.222	ENSFHEG00000001286	ythdc1	66	71.569	Fundulus_heteroclitus
ENSORLG00020019316	ythdc1	53	81.250	ENSGMOG00000018815	ythdc1	63	81.250	Gadus_morhua
ENSORLG00020019316	ythdc1	93	56.116	ENSGALG00000035906	YTHDC1	55	60.714	Gallus_gallus
ENSORLG00020019316	ythdc1	95	66.136	ENSGACG00000015486	ythdc1	94	64.957	Gasterosteus_aculeatus
ENSORLG00020019316	ythdc1	94	58.040	ENSGAGG00000007108	YTHDC1	92	54.893	Gopherus_agassizii
ENSORLG00020019316	ythdc1	60	66.988	ENSGGOG00000021958	YTHDC1	56	60.386	Gorilla_gorilla
ENSORLG00020019316	ythdc1	95	82.003	ENSHBUG00000019288	ythdc1	94	83.412	Haplochromis_burtoni
ENSORLG00020019316	ythdc1	60	66.747	ENSHGLG00000006319	-	92	52.239	Heterocephalus_glaber_female
ENSORLG00020019316	ythdc1	60	65.632	ENSHGLG00100001556	-	92	51.632	Heterocephalus_glaber_male
ENSORLG00020019316	ythdc1	69	75.844	ENSHCOG00000001520	ythdc1	88	77.011	Hippocampus_comes
ENSORLG00020019316	ythdc1	94	62.559	ENSIPUG00000018136	ythdc1	97	59.792	Ictalurus_punctatus
ENSORLG00020019316	ythdc1	60	65.721	ENSSTOG00000013652	YTHDC1	92	51.163	Ictidomys_tridecemlineatus
ENSORLG00020019316	ythdc1	60	66.024	ENSJJAG00000010268	Ythdc1	57	60.628	Jaculus_jaculus
ENSORLG00020019316	ythdc1	61	85.888	ENSKMAG00000006483	ythdc1	87	87.711	Kryptolebias_marmoratus
ENSORLG00020019316	ythdc1	68	91.111	ENSLBEG00000020831	ythdc1	89	91.111	Labrus_bergylta
ENSORLG00020019316	ythdc1	60	65.441	ENSLACG00000004893	YTHDC1	67	59.583	Latimeria_chalumnae
ENSORLG00020019316	ythdc1	94	57.593	ENSLOCG00000003045	ythdc1	92	52.263	Lepisosteus_oculatus
ENSORLG00020019316	ythdc1	94	55.966	ENSLAFG00000021592	YTHDC1	53	73.810	Loxodonta_africana
ENSORLG00020019316	ythdc1	60	66.988	ENSMFAG00000031927	YTHDC1	56	60.386	Macaca_fascicularis
ENSORLG00020019316	ythdc1	60	66.988	ENSMMUG00000002265	YTHDC1	56	60.386	Macaca_mulatta
ENSORLG00020019316	ythdc1	60	66.988	ENSMNEG00000033751	YTHDC1	56	60.386	Macaca_nemestrina
ENSORLG00020019316	ythdc1	60	66.988	ENSMLEG00000042147	YTHDC1	56	60.386	Mandrillus_leucophaeus
ENSORLG00020019316	ythdc1	95	77.174	ENSMAMG00000013122	ythdc1	92	79.257	Mastacembelus_armatus
ENSORLG00020019316	ythdc1	95	81.847	ENSMZEG00005023173	ythdc1	94	83.255	Maylandia_zebra
ENSORLG00020019316	ythdc1	60	66.747	ENSMAUG00000001286	Ythdc1	56	60.145	Mesocricetus_auratus
ENSORLG00020019316	ythdc1	94	54.455	ENSMICG00000034640	YTHDC1	92	51.170	Microcebus_murinus
ENSORLG00020019316	ythdc1	60	66.747	ENSMOCG00000020201	Ythdc1	92	52.530	Microtus_ochrogaster
ENSORLG00020019316	ythdc1	65	45.992	ENSMODG00000009173	-	60	59.091	Monodelphis_domestica
ENSORLG00020019316	ythdc1	94	57.122	ENSMODG00000020754	-	92	51.237	Monodelphis_domestica
ENSORLG00020019316	ythdc1	53	49.861	ENSMODG00000004117	-	74	58.730	Monodelphis_domestica
ENSORLG00020019316	ythdc1	84	80.105	ENSMALG00000013412	ythdc1	93	79.292	Monopterus_albus
ENSORLG00020019316	ythdc1	60	66.747	MGP_CAROLIEiJ_G0027347	Ythdc1	56	60.145	Mus_caroli
ENSORLG00020019316	ythdc1	62	65.421	ENSMUSG00000035851	Ythdc1	56	59.903	Mus_musculus
ENSORLG00020019316	ythdc1	62	65.654	MGP_PahariEiJ_G0017126	Ythdc1	56	60.145	Mus_pahari
ENSORLG00020019316	ythdc1	62	65.654	MGP_SPRETEiJ_G0028339	Ythdc1	56	60.145	Mus_spretus
ENSORLG00020019316	ythdc1	73	69.652	ENSMPUG00000001743	YTHDC1	57	67.663	Mustela_putorius_furo
ENSORLG00020019316	ythdc1	73	82.927	ENSNBRG00000007663	ythdc1	87	79.475	Neolamprologus_brichardi
ENSORLG00020019316	ythdc1	60	66.024	ENSODEG00000001715	YTHDC1	92	52.897	Octodon_degus
ENSORLG00020019316	ythdc1	95	93.182	ENSONIG00000012651	ythdc1	90	93.333	Oreochromis_niloticus
ENSORLG00020019316	ythdc1	75	70.175	ENSOCUG00000015886	YTHDC1	65	67.391	Oryctolagus_cuniculus
ENSORLG00020019316	ythdc1	100	99.099	ENSORLG00000030544	ythdc1	100	99.099	Oryzias_latipes
ENSORLG00020019316	ythdc1	100	88.839	ENSOMEG00000000551	ythdc1	95	87.893	Oryzias_melastigma
ENSORLG00020019316	ythdc1	60	66.988	ENSPPAG00000041315	YTHDC1	56	60.386	Pan_paniscus
ENSORLG00020019316	ythdc1	61	67.542	ENSPPRG00000011979	YTHDC1	56	61.111	Panthera_pardus
ENSORLG00020019316	ythdc1	61	67.303	ENSPTIG00000015527	YTHDC1	56	60.870	Panthera_tigris_altaica
ENSORLG00020019316	ythdc1	60	66.988	ENSPTRG00000016105	YTHDC1	56	60.386	Pan_troglodytes
ENSORLG00020019316	ythdc1	60	66.988	ENSPANG00000021590	YTHDC1	56	60.386	Papio_anubis
ENSORLG00020019316	ythdc1	94	60.207	ENSPKIG00000018497	ythdc1	92	56.425	Paramormyrops_kingsleyae
ENSORLG00020019316	ythdc1	93	55.522	ENSPSIG00000002782	YTHDC1	92	51.632	Pelodiscus_sinensis
ENSORLG00020019316	ythdc1	62	68.539	ENSPMGG00000000970	-	78	71.084	Periophthalmus_magnuspinnatus
ENSORLG00020019316	ythdc1	60	66.747	ENSPEMG00000013850	Ythdc1	57	60.145	Peromyscus_maniculatus_bairdii
ENSORLG00020019316	ythdc1	94	57.122	ENSPCIG00000006870	YTHDC1	92	51.351	Phascolarctos_cinereus
ENSORLG00020019316	ythdc1	95	76.741	ENSPFOG00000013404	ythdc1	94	79.747	Poecilia_formosa
ENSORLG00020019316	ythdc1	65	83.834	ENSPLAG00000011079	ythdc1	87	87.805	Poecilia_latipinna
ENSORLG00020019316	ythdc1	95	76.899	ENSPMEG00000009238	ythdc1	94	79.905	Poecilia_mexicana
ENSORLG00020019316	ythdc1	83	73.140	ENSPREG00000016973	ythdc1	90	77.174	Poecilia_reticulata
ENSORLG00020019316	ythdc1	60	65.982	ENSPPYG00000014726	YTHDC1	55	66.848	Pongo_abelii
ENSORLG00020019316	ythdc1	95	81.847	ENSPNYG00000011687	ythdc1	94	83.255	Pundamilia_nyererei
ENSORLG00020019316	ythdc1	94	64.110	ENSPNAG00000028365	ythdc1	92	59.969	Pygocentrus_nattereri
ENSORLG00020019316	ythdc1	60	66.988	ENSRROG00000035028	YTHDC1	56	60.386	Rhinopithecus_roxellana
ENSORLG00020019316	ythdc1	60	66.988	ENSSBOG00000022353	YTHDC1	56	60.386	Saimiri_boliviensis_boliviensis
ENSORLG00020019316	ythdc1	94	56.528	ENSSHAG00000002538	YTHDC1	91	51.180	Sarcophilus_harrisii
ENSORLG00020019316	ythdc1	94	61.538	ENSSFOG00015003298	ythdc1	92	57.757	Scleropages_formosus
ENSORLG00020019316	ythdc1	95	77.847	ENSSMAG00000009086	ythdc1	94	78.003	Scophthalmus_maximus
ENSORLG00020019316	ythdc1	95	81.677	ENSSDUG00000022008	ythdc1	94	83.851	Seriola_dumerili
ENSORLG00020019316	ythdc1	95	81.366	ENSSLDG00000007926	ythdc1	94	83.540	Seriola_lalandi_dorsalis
ENSORLG00020019316	ythdc1	61	68.127	ENSSARG00000010960	YTHDC1	60	66.848	Sorex_araneus
ENSORLG00020019316	ythdc1	94	55.789	ENSSPUG00000009357	YTHDC1	92	52.402	Sphenodon_punctatus
ENSORLG00020019316	ythdc1	95	80.901	ENSSPAG00000011449	ythdc1	94	81.832	Stegastes_partitus
ENSORLG00020019316	ythdc1	61	68.856	ENSSSCG00000035505	YTHDC1	51	66.223	Sus_scrofa
ENSORLG00020019316	ythdc1	80	80.000	ENSTRUG00000010142	ythdc1	84	80.000	Takifugu_rubripes
ENSORLG00020019316	ythdc1	98	69.757	ENSTNIG00000013243	ythdc1	91	69.844	Tetraodon_nigroviridis
ENSORLG00020019316	ythdc1	61	68.856	ENSUAMG00000010388	YTHDC1	60	61.111	Ursus_americanus
ENSORLG00020019316	ythdc1	93	50.940	ENSUMAG00000013668	YTHDC1	50	58.289	Ursus_maritimus
ENSORLG00020019316	ythdc1	94	54.720	ENSVPAG00000009040	YTHDC1	92	52.444	Vicugna_pacos
ENSORLG00020019316	ythdc1	61	68.856	ENSVVUG00000005387	YTHDC1	51	67.663	Vulpes_vulpes
ENSORLG00020019316	ythdc1	94	57.663	ENSXETG00000017960	ythdc1	92	55.046	Xenopus_tropicalis
ENSORLG00020019316	ythdc1	53	73.267	ENSXCOG00000000530	ythdc1	82	72.549	Xiphophorus_couchianus
ENSORLG00020019316	ythdc1	95	79.272	ENSXMAG00000005196	ythdc1	94	79.905	Xiphophorus_maculatus