EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020019341 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5914 bases
Position: chr17:8467126-8473039
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020018398	zf-C2H2	PF00096.26	1.9e-18	1	3
ENSORLP00020018398	zf-C2H2	PF00096.26	1.9e-18	2	3
ENSORLP00020018398	zf-C2H2	PF00096.26	1.9e-18	3	3
ENSORLP00020033379	zf-C2H2	PF00096.26	4e-09	1	1
ENSORLP00020033379	zf-met	PF12874.7	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020027244	-	3940	-	ENSORLP00020018398	413 (aa)	-	-
ENSORLT00020034715	-	174	-	ENSORLP00020033379	57 (aa)	-	-

Gene Model

Click here to download ENSORLG00020019341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020019341	-	77	50.000	ENSORLG00020018791	-	81	40.909
ENSORLG00020019341	-	81	57.500	ENSORLG00020000219	-	63	46.296
ENSORLG00020019341	-	86	72.727	ENSORLG00020008346	-	81	57.377
ENSORLG00020019341	-	74	59.375	ENSORLG00020000264	-	53	44.444
ENSORLG00020019341	-	84	70.588	ENSORLG00020009419	-	88	47.788
ENSORLG00020019341	-	77	57.143	ENSORLG00020003719	GFI1B	55	47.170
ENSORLG00020019341	-	93	60.000	ENSORLG00020007967	-	81	45.205
ENSORLG00020019341	-	74	47.619	ENSORLG00020005815	-	58	46.341
ENSORLG00020019341	-	91	56.757	ENSORLG00020011234	-	75	47.788
ENSORLG00020019341	-	89	69.444	ENSORLG00020010171	-	93	52.727
ENSORLG00020019341	-	61	73.529	ENSORLG00020000246	-	82	46.903
ENSORLG00020019341	-	82	53.659	ENSORLG00020007074	-	93	45.045
ENSORLG00020019341	-	84	61.765	ENSORLG00020008933	-	69	46.018
ENSORLG00020019341	-	81	60.976	ENSORLG00020009965	-	82	48.739
ENSORLG00020019341	-	88	59.375	ENSORLG00020008744	-	51	40.157
ENSORLG00020019341	-	86	53.061	ENSORLG00020001922	-	59	42.857
ENSORLG00020019341	-	72	53.659	ENSORLG00020010285	znf646	51	39.080
ENSORLG00020019341	-	82	61.765	ENSORLG00020000481	-	79	48.235
ENSORLG00020019341	-	77	61.765	ENSORLG00020016037	-	94	47.059
ENSORLG00020019341	-	86	60.606	ENSORLG00020004353	-	93	46.957
ENSORLG00020019341	-	81	71.875	ENSORLG00020011075	-	75	48.649
ENSORLG00020019341	-	63	58.824	ENSORLG00020001912	znf236	55	44.444
ENSORLG00020019341	-	68	71.875	ENSORLG00020010636	-	75	47.009
ENSORLG00020019341	-	86	55.000	ENSORLG00020009184	-	83	47.788
ENSORLG00020019341	-	60	66.667	ENSORLG00020010020	-	69	46.809
ENSORLG00020019341	-	84	70.588	ENSORLG00020008891	-	82	50.847
ENSORLG00020019341	-	77	57.143	ENSORLG00020002817	GFI1	53	43.810
ENSORLG00020019341	-	82	59.375	ENSORLG00020007599	-	64	44.915
ENSORLG00020019341	-	75	66.667	ENSORLG00020010647	-	81	48.673
ENSORLG00020019341	-	86	61.765	ENSORLG00020020419	-	75	43.697
ENSORLG00020019341	-	56	56.250	ENSORLG00020001758	-	64	40.741
ENSORLG00020019341	-	72	70.588	ENSORLG00020008424	-	83	47.788
ENSORLG00020019341	-	93	73.529	ENSORLG00020009180	-	96	49.425
ENSORLG00020019341	-	79	59.459	ENSORLG00020017514	-	86	46.903
ENSORLG00020019341	-	65	70.833	ENSORLG00020010953	-	77	48.276
ENSORLG00020019341	-	93	58.824	ENSORLG00020015703	-	52	45.000
ENSORLG00020019341	-	74	57.143	ENSORLG00020018685	znf319b	97	43.529
ENSORLG00020019341	-	82	66.667	ENSORLG00020017164	-	97	50.442
ENSORLG00020019341	-	91	51.429	ENSORLG00020002128	-	79	43.363
ENSORLG00020019341	-	86	60.526	ENSORLG00020009139	-	94	49.558
ENSORLG00020019341	-	93	70.588	ENSORLG00020010880	-	74	50.435
ENSORLG00020019341	-	63	47.222	ENSORLG00020018051	prdm5	67	39.474
ENSORLG00020019341	-	82	64.706	ENSORLG00020009089	-	54	48.673
ENSORLG00020019341	-	88	63.636	ENSORLG00020017528	-	70	50.000
ENSORLG00020019341	-	84	60.606	ENSORLG00020018069	-	93	46.364
ENSORLG00020019341	-	75	70.588	ENSORLG00020010916	-	59	50.450
ENSORLG00020019341	-	86	65.625	ENSORLG00020005132	-	76	55.000
ENSORLG00020019341	-	89	65.625	ENSORLG00020010250	-	94	53.333
ENSORLG00020019341	-	60	57.576	ENSORLG00020009554	-	74	39.316
ENSORLG00020019341	-	81	63.636	ENSORLG00020004370	-	78	47.887
ENSORLG00020019341	-	84	68.750	ENSORLG00020009943	-	92	48.214
ENSORLG00020019341	-	84	63.636	ENSORLG00020011149	-	82	52.857
ENSORLG00020019341	-	81	56.410	ENSORLG00020006144	-	72	45.614
ENSORLG00020019341	-	74	78.125	ENSORLG00020006148	-	56	48.673
ENSORLG00020019341	-	79	58.333	ENSORLG00020008018	-	73	43.363
ENSORLG00020019341	-	86	47.917	ENSORLG00020006820	-	69	40.000
ENSORLG00020019341	-	86	64.706	ENSORLG00020008484	-	81	45.122
ENSORLG00020019341	-	82	57.143	ENSORLG00020017483	-	91	44.348
ENSORLG00020019341	-	93	54.054	ENSORLG00020018921	-	69	45.133
ENSORLG00020019341	-	81	61.290	ENSORLG00020007018	-	78	45.133
ENSORLG00020019341	-	56	56.250	ENSORLG00020008787	snai2	53	41.818
ENSORLG00020019341	-	82	71.875	ENSORLG00020009857	-	96	52.874
ENSORLG00020019341	-	74	54.054	ENSORLG00020004889	ZNF319	63	43.519
ENSORLG00020019341	-	79	78.261	ENSORLG00020010804	-	97	49.123
ENSORLG00020019341	-	79	60.606	ENSORLG00020016754	-	89	45.133
ENSORLG00020019341	-	65	43.243	ENSORLG00020010932	-	72	48.780
ENSORLG00020019341	-	81	58.696	ENSORLG00020001707	-	75	51.685
ENSORLG00020019341	-	77	54.286	ENSORLG00020018503	-	68	47.619
ENSORLG00020019341	-	86	52.273	ENSORLG00020016666	-	65	44.538
ENSORLG00020019341	-	82	62.500	ENSORLG00020017850	-	88	49.558
ENSORLG00020019341	-	91	61.765	ENSORLG00020010950	-	97	46.914
ENSORLG00020019341	-	93	64.706	ENSORLG00020018495	-	65	47.573
ENSORLG00020019341	-	77	46.341	ENSORLG00020007790	zbtb48	55	36.036
ENSORLG00020019341	-	86	70.588	ENSORLG00020010560	-	99	46.903
ENSORLG00020019341	-	67	67.647	ENSORLG00020000161	-	97	50.575
ENSORLG00020019341	-	79	67.647	ENSORLG00020010038	-	58	51.327

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019341	-	75	50.000	ENSACIG00000007882	-	76	46.018	Amphilophus_citrinellus
ENSORLG00020019341	-	82	60.000	ENSACIG00000000360	si:ch211-241b2.1	87	46.218	Amphilophus_citrinellus
ENSORLG00020019341	-	88	60.976	ENSATEG00000008683	si:ch211-241b2.1	72	45.378	Anabas_testudineus
ENSORLG00020019341	-	86	61.364	ENSACLG00000024670	-	70	46.847	Astatotilapia_calliptera
ENSORLG00020019341	-	63	50.000	ENSACLG00000000521	-	82	43.617	Astatotilapia_calliptera
ENSORLG00020019341	-	75	64.000	ENSAMXG00000043291	-	66	47.748	Astyanax_mexicanus
ENSORLG00020019341	-	74	57.500	ENSAMXG00000041650	-	84	48.571	Astyanax_mexicanus
ENSORLG00020019341	-	74	54.054	ENSCSEG00000015585	-	68	37.857	Cynoglossus_semilaevis
ENSORLG00020019341	-	53	50.562	ENSDARG00000103777	znf1001	98	50.562	Danio_rerio
ENSORLG00020019341	-	70	57.500	ENSDARG00000102053	znf1164	72	47.312	Danio_rerio
ENSORLG00020019341	-	79	55.263	ENSDARG00000098661	AL935300.3	73	44.248	Danio_rerio
ENSORLG00020019341	-	61	60.000	ENSDARG00000093672	zgc:171435	69	50.000	Danio_rerio
ENSORLG00020019341	-	81	61.905	ENSDARG00000115857	znf1001	94	50.000	Danio_rerio
ENSORLG00020019341	-	79	67.647	ENSDARG00000094736	znf1157	84	49.138	Danio_rerio
ENSORLG00020019341	-	75	75.758	ENSDARG00000078159	zgc:175284	85	47.059	Danio_rerio
ENSORLG00020019341	-	79	70.968	ENSDARG00000099618	si:dkey-1b17.6	88	42.727	Danio_rerio
ENSORLG00020019341	-	53	49.533	ENSDARG00000109703	FO834825.1	83	49.533	Danio_rerio
ENSORLG00020019341	-	77	63.889	ENSDARG00000078814	si:dkey-34m19.3	78	49.541	Danio_rerio
ENSORLG00020019341	-	79	61.111	ENSDARG00000113011	zgc:113102	86	49.558	Danio_rerio
ENSORLG00020019341	-	81	59.524	ENSDARG00000088507	znf982	79	50.000	Danio_rerio
ENSORLG00020019341	-	82	56.522	ENSDARG00000099172	BX000701.1	86	48.182	Danio_rerio
ENSORLG00020019341	-	81	61.905	ENSDARG00000102401	znf1001	94	50.000	Danio_rerio
ENSORLG00020019341	-	88	57.895	ENSDARG00000113666	znf1173	67	41.732	Danio_rerio
ENSORLG00020019341	-	75	60.000	ENSDARG00000092246	si:dkey-20i20.3	60	48.276	Danio_rerio
ENSORLG00020019341	-	86	75.510	ENSELUG00000017412	-	99	40.244	Esox_lucius
ENSORLG00020019341	-	89	48.936	ENSFHEG00000018209	-	66	43.333	Fundulus_heteroclitus
ENSORLG00020019341	-	84	60.976	ENSFHEG00000018009	-	60	47.706	Fundulus_heteroclitus
ENSORLG00020019341	-	79	65.714	ENSFHEG00000013152	-	61	49.138	Fundulus_heteroclitus
ENSORLG00020019341	-	84	55.556	ENSHBUG00000009953	-	64	39.735	Haplochromis_burtoni
ENSORLG00020019341	-	84	62.500	ENSHBUG00000018916	-	60	49.091	Haplochromis_burtoni
ENSORLG00020019341	-	68	55.556	ENSKMAG00000014629	-	51	48.837	Kryptolebias_marmoratus
ENSORLG00020019341	-	86	57.500	ENSKMAG00000009563	-	75	47.541	Kryptolebias_marmoratus
ENSORLG00020019341	-	81	57.576	ENSMAMG00000014743	-	53	45.783	Mastacembelus_armatus
ENSORLG00020019341	-	75	53.125	ENSMZEG00005005162	-	58	46.914	Maylandia_zebra
ENSORLG00020019341	-	70	52.778	ENSMZEG00005021426	-	75	45.045	Maylandia_zebra
ENSORLG00020019341	-	79	58.140	ENSMZEG00005027793	-	74	50.442	Maylandia_zebra
ENSORLG00020019341	-	75	59.524	ENSMZEG00005026470	-	55	57.627	Maylandia_zebra
ENSORLG00020019341	-	79	66.667	ENSMZEG00005027943	-	95	47.826	Maylandia_zebra
ENSORLG00020019341	-	75	55.814	ENSMZEG00005025729	-	90	44.643	Maylandia_zebra
ENSORLG00020019341	-	86	62.791	ENSMZEG00005007426	-	63	50.000	Maylandia_zebra
ENSORLG00020019341	-	86	79.592	ENSMALG00000010962	-	99	49.333	Monopterus_albus
ENSORLG00020019341	-	74	50.000	ENSMALG00000008638	-	54	41.860	Monopterus_albus
ENSORLG00020019341	-	81	66.667	ENSMALG00000018074	-	58	52.809	Monopterus_albus
ENSORLG00020019341	-	81	67.647	ENSNBRG00000000577	-	74	56.364	Neolamprologus_brichardi
ENSORLG00020019341	-	51	51.724	ENSONIG00000003363	-	99	48.750	Oreochromis_niloticus
ENSORLG00020019341	-	77	55.556	ENSONIG00000013908	-	100	46.903	Oreochromis_niloticus
ENSORLG00020019341	-	75	48.837	ENSONIG00000006585	-	93	40.506	Oreochromis_niloticus
ENSORLG00020019341	-	79	55.882	ENSPKIG00000020324	-	56	40.367	Paramormyrops_kingsleyae
ENSORLG00020019341	-	79	60.000	ENSPMGG00000001558	znf1174	53	42.529	Periophthalmus_magnuspinnatus
ENSORLG00020019341	-	82	85.366	ENSPFOG00000001144	-	100	69.912	Poecilia_formosa
ENSORLG00020019341	-	91	53.061	ENSPFOG00000011766	-	98	45.946	Poecilia_formosa
ENSORLG00020019341	-	95	65.517	ENSPLAG00000016561	zgc:113348	87	51.327	Poecilia_latipinna
ENSORLG00020019341	-	100	43.860	ENSPMEG00000007573	zgc:113343	99	43.860	Poecilia_mexicana
ENSORLG00020019341	-	72	58.824	ENSPREG00000005538	-	80	43.243	Poecilia_reticulata
ENSORLG00020019341	-	61	57.143	ENSPREG00000014105	-	90	40.000	Poecilia_reticulata
ENSORLG00020019341	-	81	56.098	ENSPREG00000001514	zgc:113343	62	43.860	Poecilia_reticulata
ENSORLG00020019341	-	79	61.111	ENSSDUG00000008682	-	61	47.561	Seriola_dumerili
ENSORLG00020019341	-	86	42.857	ENSSPAG00000009426	-	55	43.750	Stegastes_partitus
ENSORLG00020019341	-	88	58.621	ENSSPAG00000006539	-	93	40.367	Stegastes_partitus
ENSORLG00020019341	-	81	60.606	ENSSPAG00000013109	si:ch211-241b2.1	71	52.083	Stegastes_partitus
ENSORLG00020019341	-	89	81.818	ENSTNIG00000000277	-	93	80.612	Tetraodon_nigroviridis
ENSORLG00020019341	-	100	42.982	ENSXCOG00000017871	zgc:113343	99	43.243	Xiphophorus_couchianus
ENSORLG00020019341	-	100	42.982	ENSXMAG00000019923	zgc:113343	62	42.982	Xiphophorus_maculatus