EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020019354 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 4511 bases
Position: chr17:8458368-8462878
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020033395	zf-C2H2	PF00096.26	1.9e-13	1	2
ENSORLP00020033395	zf-C2H2	PF00096.26	1.9e-13	2	2
ENSORLP00020033395	zf-met	PF12874.7	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020027241	-	2034	-	ENSORLP00020033395	493 (aa)	-	-

Gene Model

Click here to download ENSORLG00020019354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020019354	-	51	50.633	ENSORLG00020010171	-	91	50.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019354	-	89	51.068	ENSCVAG00000010877	-	100	50.427	Cyprinodon_variegatus
ENSORLG00020019354	-	60	54.054	ENSELUG00000005912	-	89	54.054	Esox_lucius
ENSORLG00020019354	-	52	51.948	ENSMALG00000008786	-	85	51.948	Monopterus_albus
ENSORLG00020019354	-	100	97.980	ENSORLG00000027494	-	100	97.980	Oryzias_latipes
ENSORLG00020019354	-	91	94.235	ENSORLG00015018295	-	100	94.235	Oryzias_latipes_hsok
ENSORLG00020019354	-	93	79.694	ENSOMEG00000020943	-	97	79.694	Oryzias_melastigma
ENSORLG00020019354	-	91	49.684	ENSPMEG00000006754	-	95	49.375	Poecilia_mexicana
ENSORLG00020019354	-	52	50.685	ENSPMEG00000024345	-	69	50.685	Poecilia_mexicana
ENSORLG00020019354	-	89	48.922	ENSPREG00000021116	-	95	49.359	Poecilia_reticulata
ENSORLG00020019354	-	50	50.000	ENSXMAG00000026679	-	98	49.383	Xiphophorus_maculatus