EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020019446 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 23426 bases
Position: chr3:29720681-29744106
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020018488	FDF	PF09532.10	7.1e-08	1	1
ENSORLP00020018488	LSM14	PF12701.7	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020027337	-	4431	-	ENSORLP00020018488	472 (aa)	-	-

Gene Model

Click here to download ENSORLG00020019446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019446's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020019446	-	100	62.940	ENSORLG00020012262	edc3	100	62.940

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019446	-	100	56.641	ENSG00000179151	EDC3	100	74.074	Homo_sapiens
ENSORLG00020019446	-	100	65.217	ENSAPOG00000010791	edc3	100	65.217	Acanthochromis_polyacanthus
ENSORLG00020019446	-	100	69.309	ENSAPOG00000008655	EDC3	100	69.309	Acanthochromis_polyacanthus
ENSORLG00020019446	-	100	57.031	ENSAMEG00000008963	EDC3	100	57.031	Ailuropoda_melanoleuca
ENSORLG00020019446	-	100	63.278	ENSACIG00000017751	edc3	100	63.278	Amphilophus_citrinellus
ENSORLG00020019446	-	99	74.747	ENSACIG00000005330	EDC3	99	74.747	Amphilophus_citrinellus
ENSORLG00020019446	-	100	76.793	ENSAOCG00000009103	-	100	76.793	Amphiprion_ocellaris
ENSORLG00020019446	-	100	65.010	ENSAOCG00000005431	edc3	100	65.010	Amphiprion_ocellaris
ENSORLG00020019446	-	100	65.010	ENSAPEG00000000968	edc3	100	65.010	Amphiprion_percula
ENSORLG00020019446	-	100	77.004	ENSAPEG00000007841	EDC3	100	77.004	Amphiprion_percula
ENSORLG00020019446	-	100	76.050	ENSATEG00000004205	-	100	76.050	Anabas_testudineus
ENSORLG00020019446	-	100	65.010	ENSATEG00000015505	edc3	100	65.010	Anabas_testudineus
ENSORLG00020019446	-	75	65.819	ENSAPLG00000008957	EDC3	77	65.819	Anas_platyrhynchos
ENSORLG00020019446	-	76	53.383	ENSACAG00000000460	-	100	53.383	Anolis_carolinensis
ENSORLG00020019446	-	100	56.420	ENSANAG00000024078	EDC3	100	56.420	Aotus_nancymaae
ENSORLG00020019446	-	99	75.212	ENSACLG00000018776	-	99	75.212	Astatotilapia_calliptera
ENSORLG00020019446	-	100	63.278	ENSACLG00000007232	edc3	100	63.278	Astatotilapia_calliptera
ENSORLG00020019446	-	100	62.402	ENSAMXG00000001589	edc3	100	62.402	Astyanax_mexicanus
ENSORLG00020019446	-	100	56.836	ENSBTAG00000007308	EDC3	100	56.836	Bos_taurus
ENSORLG00020019446	-	100	56.809	ENSCJAG00000017681	EDC3	100	56.809	Callithrix_jacchus
ENSORLG00020019446	-	100	56.836	ENSCAFG00000017935	EDC3	100	57.031	Canis_familiaris
ENSORLG00020019446	-	100	56.836	ENSCAFG00020003909	EDC3	100	57.031	Canis_lupus_dingo
ENSORLG00020019446	-	100	57.031	ENSCHIG00000023658	EDC3	100	57.031	Capra_hircus
ENSORLG00020019446	-	100	56.615	ENSTSYG00000004822	EDC3	100	56.615	Carlito_syrichta
ENSORLG00020019446	-	100	56.836	ENSCPOG00000015595	EDC3	100	56.836	Cavia_porcellus
ENSORLG00020019446	-	100	56.615	ENSCCAG00000021663	EDC3	100	56.615	Cebus_capucinus
ENSORLG00020019446	-	100	56.641	ENSCATG00000037511	EDC3	100	56.641	Cercocebus_atys
ENSORLG00020019446	-	100	57.588	ENSCLAG00000005700	EDC3	100	57.782	Chinchilla_lanigera
ENSORLG00020019446	-	100	56.641	ENSCSAG00000014239	EDC3	100	56.641	Chlorocebus_sabaeus
ENSORLG00020019446	-	99	57.227	ENSCPBG00000024239	EDC3	99	57.227	Chrysemys_picta_bellii
ENSORLG00020019446	-	99	36.056	ENSCING00000022142	-	99	36.056	Ciona_intestinalis
ENSORLG00020019446	-	100	56.641	ENSCANG00000028699	EDC3	100	56.641	Colobus_angolensis_palliatus
ENSORLG00020019446	-	100	56.250	ENSCGRG00001013874	Edc3	100	56.250	Cricetulus_griseus_chok1gshd
ENSORLG00020019446	-	100	56.250	ENSCGRG00000011885	Edc3	100	56.250	Cricetulus_griseus_crigri
ENSORLG00020019446	-	99	64.523	ENSCSEG00000012996	edc3	99	64.523	Cynoglossus_semilaevis
ENSORLG00020019446	-	100	64.033	ENSCVAG00000008023	edc3	100	64.033	Cyprinodon_variegatus
ENSORLG00020019446	-	99	60.511	ENSDARG00000051931	edc3	99	60.707	Danio_rerio
ENSORLG00020019446	-	100	50.766	ENSDNOG00000030661	EDC3	100	50.766	Dasypus_novemcinctus
ENSORLG00020019446	-	70	74.074	ENSETEG00000002398	-	64	74.074	Echinops_telfairi
ENSORLG00020019446	-	100	57.031	ENSEASG00005005071	EDC3	100	57.031	Equus_asinus_asinus
ENSORLG00020019446	-	100	57.031	ENSECAG00000017994	EDC3	100	57.031	Equus_caballus
ENSORLG00020019446	-	100	66.247	ENSELUG00000007607	EDC3	100	66.247	Esox_lucius
ENSORLG00020019446	-	100	62.083	ENSELUG00000005794	edc3	100	62.083	Esox_lucius
ENSORLG00020019446	-	100	56.641	ENSFCAG00000002014	EDC3	100	56.641	Felis_catus
ENSORLG00020019446	-	98	54.691	ENSFALG00000004543	EDC3	96	54.691	Ficedula_albicollis
ENSORLG00020019446	-	100	56.641	ENSFDAG00000012582	EDC3	100	56.641	Fukomys_damarensis
ENSORLG00020019446	-	100	64.108	ENSFHEG00000009375	edc3	100	64.108	Fundulus_heteroclitus
ENSORLG00020019446	-	100	64.596	ENSGMOG00000002715	edc3	100	64.596	Gadus_morhua
ENSORLG00020019446	-	99	56.890	ENSGALG00000040181	EDC3	99	56.890	Gallus_gallus
ENSORLG00020019446	-	100	63.147	ENSGAFG00000014433	edc3	100	63.147	Gambusia_affinis
ENSORLG00020019446	-	100	63.636	ENSGACG00000009783	edc3	100	63.636	Gasterosteus_aculeatus
ENSORLG00020019446	-	99	67.850	ENSGACG00000014671	EDC3	99	68.245	Gasterosteus_aculeatus
ENSORLG00020019446	-	99	57.283	ENSGAGG00000023477	EDC3	99	57.283	Gopherus_agassizii
ENSORLG00020019446	-	100	56.641	ENSGGOG00000003552	EDC3	100	56.641	Gorilla_gorilla
ENSORLG00020019446	-	99	75.424	ENSHBUG00000020817	EDC3	99	75.424	Haplochromis_burtoni
ENSORLG00020019446	-	100	63.278	ENSHBUG00000003635	edc3	100	63.278	Haplochromis_burtoni
ENSORLG00020019446	-	100	62.630	ENSHCOG00000016834	edc3	100	62.630	Hippocampus_comes
ENSORLG00020019446	-	99	61.829	ENSIPUG00000005695	edc3	99	61.829	Ictalurus_punctatus
ENSORLG00020019446	-	100	56.250	ENSSTOG00000013936	EDC3	100	56.250	Ictidomys_tridecemlineatus
ENSORLG00020019446	-	100	56.615	ENSJJAG00000008074	Edc3	100	56.250	Jaculus_jaculus
ENSORLG00020019446	-	100	79.325	ENSKMAG00000001987	EDC3	100	79.325	Kryptolebias_marmoratus
ENSORLG00020019446	-	100	63.975	ENSKMAG00000001243	edc3	100	63.975	Kryptolebias_marmoratus
ENSORLG00020019446	-	100	75.941	ENSLBEG00000017984	EDC3	100	75.941	Labrus_bergylta
ENSORLG00020019446	-	100	63.693	ENSLBEG00000013435	edc3	99	63.693	Labrus_bergylta
ENSORLG00020019446	-	99	58.252	ENSLACG00000014149	EDC3	99	58.252	Latimeria_chalumnae
ENSORLG00020019446	-	99	57.576	ENSLOCG00000014625	edc3	99	58.182	Lepisosteus_oculatus
ENSORLG00020019446	-	100	56.556	ENSLAFG00000002992	EDC3	100	56.920	Loxodonta_africana
ENSORLG00020019446	-	100	56.445	ENSMFAG00000043074	EDC3	100	56.445	Macaca_fascicularis
ENSORLG00020019446	-	100	56.445	ENSMMUG00000011071	EDC3	100	56.445	Macaca_mulatta
ENSORLG00020019446	-	100	56.445	ENSMNEG00000035316	EDC3	100	56.445	Macaca_nemestrina
ENSORLG00020019446	-	100	56.641	ENSMLEG00000030372	EDC3	100	56.641	Mandrillus_leucophaeus
ENSORLG00020019446	-	100	64.198	ENSMAMG00000000505	edc3	100	64.198	Mastacembelus_armatus
ENSORLG00020019446	-	99	77.637	ENSMAMG00000005423	-	99	77.637	Mastacembelus_armatus
ENSORLG00020019446	-	100	63.071	ENSMZEG00005004892	edc3	100	63.071	Maylandia_zebra
ENSORLG00020019446	-	99	75.314	ENSMZEG00005005654	EDC3	99	75.314	Maylandia_zebra
ENSORLG00020019446	-	99	57.087	ENSMGAG00000002617	EDC3	99	56.863	Meleagris_gallopavo
ENSORLG00020019446	-	100	56.809	ENSMICG00000043190	EDC3	100	56.809	Microcebus_murinus
ENSORLG00020019446	-	100	56.250	ENSMOCG00000016205	Edc3	100	56.250	Microtus_ochrogaster
ENSORLG00020019446	-	99	64.375	ENSMMOG00000012278	edc3	99	64.375	Mola_mola
ENSORLG00020019446	-	99	56.078	ENSMODG00000009442	EDC3	99	56.078	Monodelphis_domestica
ENSORLG00020019446	-	100	64.803	ENSMALG00000008658	edc3	100	64.803	Monopterus_albus
ENSORLG00020019446	-	100	56.055	MGP_CAROLIEiJ_G0032280	Edc3	100	70.769	Mus_caroli
ENSORLG00020019446	-	100	56.055	ENSMUSG00000038957	Edc3	100	70.769	Mus_musculus
ENSORLG00020019446	-	100	56.055	MGP_PahariEiJ_G0015146	Edc3	100	70.769	Mus_pahari
ENSORLG00020019446	-	100	56.055	MGP_SPRETEiJ_G0033420	Edc3	100	70.769	Mus_spretus
ENSORLG00020019446	-	100	56.641	ENSMPUG00000017293	EDC3	100	56.641	Mustela_putorius_furo
ENSORLG00020019446	-	100	56.589	ENSMLUG00000016382	EDC3	100	56.783	Myotis_lucifugus
ENSORLG00020019446	-	100	56.445	ENSNGAG00000010923	Edc3	100	56.445	Nannospalax_galili
ENSORLG00020019446	-	100	63.071	ENSNBRG00000002434	edc3	100	63.071	Neolamprologus_brichardi
ENSORLG00020019446	-	99	74.583	ENSNBRG00000007881	EDC3	99	74.583	Neolamprologus_brichardi
ENSORLG00020019446	-	100	48.828	ENSNLEG00000014577	EDC3	100	48.828	Nomascus_leucogenys
ENSORLG00020019446	-	99	56.299	ENSMEUG00000009077	EDC3	99	56.299	Notamacropus_eugenii
ENSORLG00020019446	-	86	74.074	ENSOPRG00000009540	-	79	74.074	Ochotona_princeps
ENSORLG00020019446	-	99	70.565	ENSONIG00000002932	-	99	70.565	Oreochromis_niloticus
ENSORLG00020019446	-	100	63.485	ENSONIG00000008434	edc3	100	63.485	Oreochromis_niloticus
ENSORLG00020019446	-	76	54.250	ENSOCUG00000017740	EDC3	86	54.250	Oryctolagus_cuniculus
ENSORLG00020019446	-	100	62.733	ENSORLG00000004883	edc3	100	62.733	Oryzias_latipes
ENSORLG00020019446	-	100	99.576	ENSORLG00000014399	-	98	99.576	Oryzias_latipes
ENSORLG00020019446	-	100	62.940	ENSORLG00015005634	edc3	100	62.940	Oryzias_latipes_hsok
ENSORLG00020019446	-	100	98.941	ENSORLG00015017635	-	96	98.941	Oryzias_latipes_hsok
ENSORLG00020019446	-	100	93.856	ENSOMEG00000017354	EDC3	100	93.856	Oryzias_melastigma
ENSORLG00020019446	-	100	63.693	ENSOMEG00000014026	edc3	100	63.693	Oryzias_melastigma
ENSORLG00020019446	-	100	56.055	ENSOGAG00000014441	EDC3	100	56.055	Otolemur_garnettii
ENSORLG00020019446	-	100	56.311	ENSOARG00000003476	EDC3	100	57.115	Ovis_aries
ENSORLG00020019446	-	100	56.641	ENSPPAG00000040143	EDC3	100	56.641	Pan_paniscus
ENSORLG00020019446	-	100	56.641	ENSPPRG00000006257	EDC3	100	56.641	Panthera_pardus
ENSORLG00020019446	-	100	56.641	ENSPTIG00000017424	EDC3	100	56.641	Panthera_tigris_altaica
ENSORLG00020019446	-	100	56.641	ENSPTRG00000007279	EDC3	100	56.641	Pan_troglodytes
ENSORLG00020019446	-	100	56.641	ENSPANG00000015997	EDC3	100	56.641	Papio_anubis
ENSORLG00020019446	-	100	62.222	ENSPKIG00000019810	EDC3	100	62.424	Paramormyrops_kingsleyae
ENSORLG00020019446	-	99	61.462	ENSPKIG00000004416	edc3	99	61.462	Paramormyrops_kingsleyae
ENSORLG00020019446	-	99	52.745	ENSPSIG00000008474	EDC3	99	53.725	Pelodiscus_sinensis
ENSORLG00020019446	-	100	63.071	ENSPMGG00000007223	edc3	100	63.071	Periophthalmus_magnuspinnatus
ENSORLG00020019446	-	100	56.641	ENSPEMG00000015260	Edc3	100	56.641	Peromyscus_maniculatus_bairdii
ENSORLG00020019446	-	99	55.906	ENSPCIG00000006276	EDC3	70	55.906	Phascolarctos_cinereus
ENSORLG00020019446	-	100	63.278	ENSPFOG00000012204	edc3	100	63.278	Poecilia_formosa
ENSORLG00020019446	-	100	63.278	ENSPLAG00000014420	edc3	100	63.278	Poecilia_latipinna
ENSORLG00020019446	-	100	63.278	ENSPMEG00000023289	edc3	100	63.278	Poecilia_mexicana
ENSORLG00020019446	-	100	63.278	ENSPREG00000016022	edc3	100	63.278	Poecilia_reticulata
ENSORLG00020019446	-	100	55.664	ENSPPYG00000006642	EDC3	100	55.664	Pongo_abelii
ENSORLG00020019446	-	87	74.074	ENSPCAG00000002802	EDC3	80	74.074	Procavia_capensis
ENSORLG00020019446	-	100	56.250	ENSPCOG00000013364	EDC3	100	56.250	Propithecus_coquereli
ENSORLG00020019446	-	100	56.420	ENSPVAG00000014733	EDC3	100	56.420	Pteropus_vampyrus
ENSORLG00020019446	-	100	63.278	ENSPNYG00000021797	edc3	100	63.278	Pundamilia_nyererei
ENSORLG00020019446	-	99	75.424	ENSPNYG00000009669	EDC3	99	75.424	Pundamilia_nyererei
ENSORLG00020019446	-	100	62.475	ENSPNAG00000019657	edc3	100	62.475	Pygocentrus_nattereri
ENSORLG00020019446	-	99	55.599	ENSRNOG00000019579	Edc3	99	56.164	Rattus_norvegicus
ENSORLG00020019446	-	100	56.836	ENSRBIG00000019488	EDC3	100	56.836	Rhinopithecus_bieti
ENSORLG00020019446	-	100	56.836	ENSRROG00000034959	EDC3	100	56.836	Rhinopithecus_roxellana
ENSORLG00020019446	-	100	56.615	ENSSBOG00000004896	EDC3	100	56.615	Saimiri_boliviensis_boliviensis
ENSORLG00020019446	-	96	55.193	ENSSHAG00000015075	EDC3	95	55.193	Sarcophilus_harrisii
ENSORLG00020019446	-	100	65.190	ENSSFOG00015002439	edc3	100	65.612	Scleropages_formosus
ENSORLG00020019446	-	100	64.414	ENSSFOG00015016939	edc3	100	64.414	Scleropages_formosus
ENSORLG00020019446	-	100	63.485	ENSSMAG00000010695	edc3	100	63.786	Scophthalmus_maximus
ENSORLG00020019446	-	99	76.582	ENSSMAG00000010176	-	99	76.582	Scophthalmus_maximus
ENSORLG00020019446	-	100	64.108	ENSSDUG00000021844	edc3	100	64.108	Seriola_dumerili
ENSORLG00020019446	-	100	78.571	ENSSDUG00000007671	EDC3	100	78.571	Seriola_dumerili
ENSORLG00020019446	-	100	64.108	ENSSLDG00000022046	edc3	100	64.108	Seriola_lalandi_dorsalis
ENSORLG00020019446	-	67	71.774	ENSSARG00000003907	EDC3	62	71.774	Sorex_araneus
ENSORLG00020019446	-	99	56.471	ENSSPUG00000008232	EDC3	99	56.471	Sphenodon_punctatus
ENSORLG00020019446	-	100	79.325	ENSSPAG00000020327	EDC3	100	79.325	Stegastes_partitus
ENSORLG00020019446	-	100	64.050	ENSSPAG00000010009	edc3	100	64.050	Stegastes_partitus
ENSORLG00020019446	-	100	59.831	ENSSSCG00000001903	EDC3	100	59.831	Sus_scrofa
ENSORLG00020019446	-	99	56.693	ENSTGUG00000004007	EDC3	99	56.693	Taeniopygia_guttata
ENSORLG00020019446	-	100	64.449	ENSTRUG00000017078	edc3	100	64.449	Takifugu_rubripes
ENSORLG00020019446	-	100	63.430	ENSTNIG00000016047	edc3	100	63.430	Tetraodon_nigroviridis
ENSORLG00020019446	-	100	57.255	ENSTTRG00000007990	EDC3	100	57.255	Tursiops_truncatus
ENSORLG00020019446	-	100	57.031	ENSUAMG00000026710	-	100	57.031	Ursus_americanus
ENSORLG00020019446	-	100	57.031	ENSUMAG00000005006	EDC3	96	57.031	Ursus_maritimus
ENSORLG00020019446	-	86	68.519	ENSVPAG00000003499	-	79	68.519	Vicugna_pacos
ENSORLG00020019446	-	100	57.031	ENSVVUG00000018601	EDC3	100	57.031	Vulpes_vulpes
ENSORLG00020019446	-	74	63.818	ENSXETG00000010622	edc3	99	64.672	Xenopus_tropicalis
ENSORLG00020019446	-	100	63.278	ENSXMAG00000007377	edc3	100	63.278	Xiphophorus_maculatus