EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020019465 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-13a21.4
Alias: -
Full Name: si:dkey-13a21.4
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 3084 bases
Position: chr5:25960161-25963244
Accession: ZDB-GENE-040724-163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020018511	MMR_HSR1	PF01926.23	5.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020027354	-	929	-	ENSORLP00020033465	131 (aa)	-	-
ENSORLT00020034773	-	1148	-	ENSORLP00020018511	204 (aa)	-	-

Gene Model

Click here to download ENSORLG00020019465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019465's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020019465	si:dkey-13a21.4	77	32.911	ENSORLG00020020816	rab11ba	71	32.911
ENSORLG00020019465	si:dkey-13a21.4	81	34.132	ENSORLG00020020811	rab25a	54	34.132
ENSORLG00020019465	si:dkey-13a21.4	84	31.395	ENSORLG00020001721	rabl2	73	31.395
ENSORLG00020019465	si:dkey-13a21.4	91	33.871	ENSORLG00020020220	rab23	82	32.558
ENSORLG00020019465	si:dkey-13a21.4	96	33.673	ENSORLG00020009535	-	96	33.673
ENSORLG00020019465	si:dkey-13a21.4	88	36.111	ENSORLG00020000867	si:dkey-16l2.16	83	36.111
ENSORLG00020019465	si:dkey-13a21.4	60	30.081	ENSORLG00020002055	arl8bb	62	30.081
ENSORLG00020019465	si:dkey-13a21.4	91	35.135	ENSORLG00020011590	rab18b	89	35.135
ENSORLG00020019465	si:dkey-13a21.4	96	36.000	ENSORLG00020015717	-	79	36.000
ENSORLG00020019465	si:dkey-13a21.4	92	36.126	ENSORLG00020020277	si:dkey-34d22.5	85	36.126
ENSORLG00020019465	si:dkey-13a21.4	84	36.416	ENSORLG00020021663	rab3db	78	36.364
ENSORLG00020019465	si:dkey-13a21.4	79	37.037	ENSORLG00020001816	rab6a	80	37.037
ENSORLG00020019465	si:dkey-13a21.4	79	37.654	ENSORLG00020000604	rab41	75	37.654
ENSORLG00020019465	si:dkey-13a21.4	79	37.037	ENSORLG00020021697	-	78	37.037
ENSORLG00020019465	si:dkey-13a21.4	83	36.628	ENSORLG00020005240	RAB29	84	36.628
ENSORLG00020019465	si:dkey-13a21.4	79	35.583	ENSORLG00020020922	rab5aa	74	35.583
ENSORLG00020019465	si:dkey-13a21.4	96	45.455	ENSORLG00020000483	rab9a	96	45.455
ENSORLG00020019465	si:dkey-13a21.4	77	37.342	ENSORLG00020021071	zgc:171927	72	37.342
ENSORLG00020019465	si:dkey-13a21.4	83	53.529	ENSORLG00020005952	rab7a	82	53.529
ENSORLG00020019465	si:dkey-13a21.4	73	38.667	ENSORLG00020020266	rab33a	71	33.333
ENSORLG00020019465	si:dkey-13a21.4	88	33.333	ENSORLG00020010041	rab34a	68	33.333
ENSORLG00020019465	si:dkey-13a21.4	86	51.124	ENSORLG00020009158	rab9b	85	51.124
ENSORLG00020019465	si:dkey-13a21.4	77	37.736	ENSORLG00020019269	RAB39B	73	37.736
ENSORLG00020019465	si:dkey-13a21.4	79	36.810	ENSORLG00020020035	rab2a	75	36.810
ENSORLG00020019465	si:dkey-13a21.4	77	42.236	ENSORLG00020013895	rab42a	72	42.236
ENSORLG00020019465	si:dkey-13a21.4	74	30.247	ENSORLG00020018922	rasl11a	62	30.247
ENSORLG00020019465	si:dkey-13a21.4	79	35.802	ENSORLG00020013337	rab6bb	76	35.802
ENSORLG00020019465	si:dkey-13a21.4	71	31.724	ENSORLG00020013690	zgc:55558	88	31.361
ENSORLG00020019465	si:dkey-13a21.4	81	36.095	ENSORLG00020013719	rab25b	78	37.107
ENSORLG00020019465	si:dkey-13a21.4	90	37.297	ENSORLG00020015288	rab30	89	37.297
ENSORLG00020019465	si:dkey-13a21.4	88	32.787	ENSORLG00020016139	rab34b	66	32.787
ENSORLG00020019465	si:dkey-13a21.4	79	35.583	ENSORLG00020008388	rab5c	73	35.583
ENSORLG00020019465	si:dkey-13a21.4	68	31.429	ENSORLG00020011620	rras2	79	31.429
ENSORLG00020019465	si:dkey-13a21.4	96	32.524	ENSORLG00020010772	rab6ba	94	32.524
ENSORLG00020019465	si:dkey-13a21.4	80	34.682	ENSORLG00020006790	dnajc27	64	34.682
ENSORLG00020019465	si:dkey-13a21.4	83	49.708	ENSORLG00020008512	-	85	49.708
ENSORLG00020019465	si:dkey-13a21.4	78	31.875	ENSORLG00020012306	si:ch73-116o1.2	73	31.875
ENSORLG00020019465	si:dkey-13a21.4	86	33.333	ENSORLG00020018259	rab15	81	33.333
ENSORLG00020019465	si:dkey-13a21.4	79	36.420	ENSORLG00020000892	rab1ab	78	36.420
ENSORLG00020019465	si:dkey-13a21.4	73	41.333	ENSORLG00020018196	rab33ba	63	41.333
ENSORLG00020019465	si:dkey-13a21.4	94	35.417	ENSORLG00020008333	rab18a	93	35.417
ENSORLG00020019465	si:dkey-13a21.4	86	32.955	ENSORLG00020004905	RAB15	83	32.955
ENSORLG00020019465	si:dkey-13a21.4	73	41.176	ENSORLG00020012685	zgc:101559	63	41.176
ENSORLG00020019465	si:dkey-13a21.4	77	34.375	ENSORLG00020013747	rab11al	71	34.375
ENSORLG00020019465	si:dkey-13a21.4	81	35.714	ENSORLG00020005131	rab12	82	32.673
ENSORLG00020019465	si:dkey-13a21.4	73	38.710	ENSORLG00020013870	-	63	38.710
ENSORLG00020019465	si:dkey-13a21.4	85	34.286	ENSORLG00020018986	rab14	79	33.143
ENSORLG00020019465	si:dkey-13a21.4	77	33.125	ENSORLG00020019393	rab11bb	71	33.125
ENSORLG00020019465	si:dkey-13a21.4	77	32.911	ENSORLG00020020844	RAB11B	71	32.911
ENSORLG00020019465	si:dkey-13a21.4	71	30.345	ENSORLG00020020961	kras	98	30.337

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019465	si:dkey-13a21.4	100	80.882	ENSACIG00000011024	si:dkey-13a21.4	100	80.882	Amphilophus_citrinellus
ENSORLG00020019465	si:dkey-13a21.4	100	76.961	ENSAOCG00000020491	si:dkey-13a21.4	100	76.961	Amphiprion_ocellaris
ENSORLG00020019465	si:dkey-13a21.4	100	76.961	ENSAPEG00000023338	si:dkey-13a21.4	92	76.961	Amphiprion_percula
ENSORLG00020019465	si:dkey-13a21.4	100	79.412	ENSATEG00000014958	si:dkey-13a21.4	100	79.412	Anabas_testudineus
ENSORLG00020019465	si:dkey-13a21.4	96	53.333	ENSACAG00000012345	-	97	53.333	Anolis_carolinensis
ENSORLG00020019465	si:dkey-13a21.4	100	80.392	ENSACLG00000021109	si:dkey-13a21.4	99	80.392	Astatotilapia_calliptera
ENSORLG00020019465	si:dkey-13a21.4	100	53.081	ENSAMXG00000032663	si:dkey-13a21.4	97	53.081	Astyanax_mexicanus
ENSORLG00020019465	si:dkey-13a21.4	89	53.005	WBGene00004271	rab-7	88	53.005	Caenorhabditis_elegans
ENSORLG00020019465	si:dkey-13a21.4	100	81.863	ENSCVAG00000001150	si:dkey-13a21.4	100	81.863	Cyprinodon_variegatus
ENSORLG00020019465	si:dkey-13a21.4	100	63.592	ENSDARG00000026098	si:dkey-13a21.4	100	63.592	Danio_rerio
ENSORLG00020019465	si:dkey-13a21.4	87	54.444	ENSDNOG00000043559	-	96	51.515	Dasypus_novemcinctus
ENSORLG00020019465	si:dkey-13a21.4	100	79.512	ENSFHEG00000002502	si:dkey-13a21.4	100	79.512	Fundulus_heteroclitus
ENSORLG00020019465	si:dkey-13a21.4	100	78.922	ENSGAFG00000020102	si:dkey-13a21.4	100	78.922	Gambusia_affinis
ENSORLG00020019465	si:dkey-13a21.4	100	80.882	ENSHBUG00000014023	si:dkey-13a21.4	99	80.882	Haplochromis_burtoni
ENSORLG00020019465	si:dkey-13a21.4	86	77.841	ENSKMAG00000021039	si:dkey-13a21.4	74	77.841	Kryptolebias_marmoratus
ENSORLG00020019465	si:dkey-13a21.4	96	81.026	ENSLBEG00000018180	si:dkey-13a21.4	96	81.026	Labrus_bergylta
ENSORLG00020019465	si:dkey-13a21.4	100	61.165	ENSLOCG00000014749	si:dkey-13a21.4	100	61.165	Lepisosteus_oculatus
ENSORLG00020019465	si:dkey-13a21.4	84	56.725	ENSLAFG00000028984	-	83	56.725	Loxodonta_africana
ENSORLG00020019465	si:dkey-13a21.4	100	79.412	ENSMAMG00000021095	si:dkey-13a21.4	100	79.412	Mastacembelus_armatus
ENSORLG00020019465	si:dkey-13a21.4	100	80.392	ENSMZEG00005010220	si:dkey-13a21.4	99	80.392	Maylandia_zebra
ENSORLG00020019465	si:dkey-13a21.4	99	80.788	ENSNBRG00000023214	si:dkey-13a21.4	99	80.788	Neolamprologus_brichardi
ENSORLG00020019465	si:dkey-13a21.4	100	79.902	ENSONIG00000020296	si:dkey-13a21.4	100	79.902	Oreochromis_niloticus
ENSORLG00020019465	si:dkey-13a21.4	100	99.020	ENSORLG00000025098	si:dkey-13a21.4	100	99.020	Oryzias_latipes
ENSORLG00020019465	si:dkey-13a21.4	100	99.020	ENSORLG00015015121	si:dkey-13a21.4	100	99.020	Oryzias_latipes_hsok
ENSORLG00020019465	si:dkey-13a21.4	96	64.467	ENSPKIG00000008691	si:dkey-13a21.4	96	64.467	Paramormyrops_kingsleyae
ENSORLG00020019465	si:dkey-13a21.4	97	76.263	ENSPMGG00000023170	si:dkey-13a21.4	94	76.263	Periophthalmus_magnuspinnatus
ENSORLG00020019465	si:dkey-13a21.4	100	79.902	ENSPFOG00000015409	si:dkey-13a21.4	100	79.902	Poecilia_formosa
ENSORLG00020019465	si:dkey-13a21.4	100	79.902	ENSPLAG00000019688	si:dkey-13a21.4	100	79.902	Poecilia_latipinna
ENSORLG00020019465	si:dkey-13a21.4	100	79.902	ENSPMEG00000019159	si:dkey-13a21.4	100	79.902	Poecilia_mexicana
ENSORLG00020019465	si:dkey-13a21.4	100	78.922	ENSPREG00000022241	si:dkey-13a21.4	100	78.922	Poecilia_reticulata
ENSORLG00020019465	si:dkey-13a21.4	100	80.392	ENSPNYG00000018613	si:dkey-13a21.4	99	80.392	Pundamilia_nyererei
ENSORLG00020019465	si:dkey-13a21.4	84	47.159	YML001W	YPT7	85	47.159	Saccharomyces_cerevisiae
ENSORLG00020019465	si:dkey-13a21.4	96	65.306	ENSSFOG00015009566	si:dkey-13a21.4	96	65.306	Scleropages_formosus
ENSORLG00020019465	si:dkey-13a21.4	100	76.699	ENSSMAG00000013945	si:dkey-13a21.4	100	76.699	Scophthalmus_maximus
ENSORLG00020019465	si:dkey-13a21.4	100	81.373	ENSSDUG00000019738	si:dkey-13a21.4	100	81.373	Seriola_dumerili
ENSORLG00020019465	si:dkey-13a21.4	100	80.882	ENSSLDG00000011597	si:dkey-13a21.4	100	80.882	Seriola_lalandi_dorsalis
ENSORLG00020019465	si:dkey-13a21.4	83	58.824	ENSXETG00000014257	mgc75872	86	57.895	Xenopus_tropicalis