EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020019601 (Gene tree)
Gene ID: -
Gene Symbol: lrrc47
Alias: -
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 4791 bases
Position: chr7:5745307-5750097
Accession: 101157366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020018638	B3_4	PF03483.17	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020034826	-	2316	XM_004070315	ENSORLP00020018638	559 (aa)	XP_004070363	-

Gene Model

Click here to download ENSORLG00020019601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019601's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019601	lrrc47	99	54.514	ENSG00000130764	LRRC47	99	54.483	Homo_sapiens
ENSORLG00020019601	lrrc47	100	82.111	ENSAPOG00000019553	lrrc47	100	82.111	Acanthochromis_polyacanthus
ENSORLG00020019601	lrrc47	76	59.217	ENSAMEG00000009152	LRRC47	94	59.447	Ailuropoda_melanoleuca
ENSORLG00020019601	lrrc47	67	62.663	ENSAPLG00000003167	LRRC47	99	62.663	Anas_platyrhynchos
ENSORLG00020019601	lrrc47	66	59.947	ENSACAG00000008267	LRRC47	100	59.788	Anolis_carolinensis
ENSORLG00020019601	lrrc47	99	53.819	ENSANAG00000025576	LRRC47	99	53.793	Aotus_nancymaae
ENSORLG00020019601	lrrc47	99	55.556	ENSBTAG00000004738	LRRC47	99	56.228	Bos_taurus
ENSORLG00020019601	lrrc47	96	55.856	ENSCAFG00000019492	LRRC47	97	55.652	Canis_familiaris
ENSORLG00020019601	lrrc47	99	56.021	ENSCAFG00020009667	LRRC47	99	55.923	Canis_lupus_dingo
ENSORLG00020019601	lrrc47	99	56.272	ENSCHIG00000022607	LRRC47	98	56.076	Capra_hircus
ENSORLG00020019601	lrrc47	96	55.676	ENSTSYG00000009326	LRRC47	97	55.732	Carlito_syrichta
ENSORLG00020019601	lrrc47	66	60.638	ENSCAPG00000016517	LRRC47	99	60.477	Cavia_aperea
ENSORLG00020019601	lrrc47	99	55.208	ENSCPOG00000014931	LRRC47	95	55.208	Cavia_porcellus
ENSORLG00020019601	lrrc47	99	53.993	ENSCCAG00000024895	LRRC47	99	53.966	Cebus_capucinus
ENSORLG00020019601	lrrc47	99	55.286	ENSCATG00000029337	LRRC47	99	55.286	Cercocebus_atys
ENSORLG00020019601	lrrc47	99	55.672	ENSCLAG00000006093	LRRC47	99	55.497	Chinchilla_lanigera
ENSORLG00020019601	lrrc47	99	55.459	ENSCSAG00000000727	LRRC47	99	55.459	Chlorocebus_sabaeus
ENSORLG00020019601	lrrc47	99	51.771	ENSCPBG00000019404	LRRC47	99	51.771	Chrysemys_picta_bellii
ENSORLG00020019601	lrrc47	79	57.734	ENSCANG00000030701	LRRC47	96	57.952	Colobus_angolensis_palliatus
ENSORLG00020019601	lrrc47	99	55.944	ENSCGRG00001015159	Lrrc47	89	56.119	Cricetulus_griseus_chok1gshd
ENSORLG00020019601	lrrc47	66	60.800	ENSCGRG00000017336	Lrrc47	99	60.904	Cricetulus_griseus_crigri
ENSORLG00020019601	lrrc47	100	73.703	ENSCSEG00000006217	lrrc47	96	73.703	Cynoglossus_semilaevis
ENSORLG00020019601	lrrc47	66	61.804	ENSDORG00000016594	Lrrc47	99	61.804	Dipodomys_ordii
ENSORLG00020019601	lrrc47	99	56.326	ENSEASG00005021788	LRRC47	99	56.454	Equus_asinus_asinus
ENSORLG00020019601	lrrc47	99	55.806	ENSECAG00000022472	LRRC47	89	56.110	Equus_caballus
ENSORLG00020019601	lrrc47	100	67.372	ENSELUG00000017544	lrrc47	98	67.901	Esox_lucius
ENSORLG00020019601	lrrc47	94	54.495	ENSFCAG00000011632	LRRC47	96	54.679	Felis_catus
ENSORLG00020019601	lrrc47	79	57.014	ENSFALG00000009631	LRRC47	98	58.014	Ficedula_albicollis
ENSORLG00020019601	lrrc47	100	65.194	ENSGMOG00000015674	lrrc47	99	65.371	Gadus_morhua
ENSORLG00020019601	lrrc47	99	53.240	ENSGALG00000050995	LRRC47	99	53.590	Gallus_gallus
ENSORLG00020019601	lrrc47	100	75.714	ENSGACG00000005550	lrrc47	99	75.893	Gasterosteus_aculeatus
ENSORLG00020019601	lrrc47	99	51.684	ENSGAGG00000022584	LRRC47	99	52.525	Gopherus_agassizii
ENSORLG00020019601	lrrc47	99	54.688	ENSGGOG00000015571	LRRC47	99	54.655	Gorilla_gorilla
ENSORLG00020019601	lrrc47	99	54.340	ENSHGLG00000018278	LRRC47	95	54.340	Heterocephalus_glaber_female
ENSORLG00020019601	lrrc47	70	59.553	ENSHGLG00100008507	LRRC47	99	59.553	Heterocephalus_glaber_male
ENSORLG00020019601	lrrc47	100	75.313	ENSHCOG00000006348	lrrc47	98	75.134	Hippocampus_comes
ENSORLG00020019601	lrrc47	99	55.959	ENSSTOG00000027559	LRRC47	99	56.304	Ictidomys_tridecemlineatus
ENSORLG00020019601	lrrc47	99	56.076	ENSJJAG00000017474	Lrrc47	96	56.250	Jaculus_jaculus
ENSORLG00020019601	lrrc47	100	80.143	ENSKMAG00000003414	lrrc47	100	80.143	Kryptolebias_marmoratus
ENSORLG00020019601	lrrc47	99	55.903	ENSLAFG00000011657	LRRC47	99	56.034	Loxodonta_africana
ENSORLG00020019601	lrrc47	99	41.594	ENSMFAG00000045730	LRRC47	92	53.876	Macaca_fascicularis
ENSORLG00020019601	lrrc47	99	55.286	ENSMNEG00000042488	LRRC47	99	54.483	Macaca_nemestrina
ENSORLG00020019601	lrrc47	77	57.366	ENSMLEG00000043735	LRRC47	93	56.371	Mandrillus_leucophaeus
ENSORLG00020019601	lrrc47	99	56.119	ENSMAUG00000021337	Lrrc47	97	56.294	Mesocricetus_auratus
ENSORLG00020019601	lrrc47	99	54.483	ENSMICG00000026816	LRRC47	99	54.811	Microcebus_murinus
ENSORLG00020019601	lrrc47	99	56.162	ENSMOCG00000021279	Lrrc47	99	56.162	Microtus_ochrogaster
ENSORLG00020019601	lrrc47	100	76.744	ENSMMOG00000017007	lrrc47	100	76.744	Mola_mola
ENSORLG00020019601	lrrc47	99	44.254	ENSMODG00000006554	LRRC47	97	53.578	Monodelphis_domestica
ENSORLG00020019601	lrrc47	99	56.522	MGP_CAROLIEiJ_G0026864	Lrrc47	99	56.627	Mus_caroli
ENSORLG00020019601	lrrc47	99	56.870	ENSMUSG00000029028	Lrrc47	99	56.971	Mus_musculus
ENSORLG00020019601	lrrc47	97	57.168	MGP_PahariEiJ_G0029212	Lrrc47	97	57.268	Mus_pahari
ENSORLG00020019601	lrrc47	99	56.522	MGP_SPRETEiJ_G0027857	Lrrc47	99	56.627	Mus_spretus
ENSORLG00020019601	lrrc47	66	60.317	ENSMPUG00000007321	LRRC47	75	60.317	Mustela_putorius_furo
ENSORLG00020019601	lrrc47	99	54.991	ENSNGAG00000022153	Lrrc47	98	55.575	Nannospalax_galili
ENSORLG00020019601	lrrc47	99	53.833	ENSNLEG00000008131	LRRC47	99	53.806	Nomascus_leucogenys
ENSORLG00020019601	lrrc47	84	56.557	ENSODEG00000010882	LRRC47	93	56.557	Octodon_degus
ENSORLG00020019601	lrrc47	97	98.889	ENSORLG00000002532	lrrc47	100	98.889	Oryzias_latipes
ENSORLG00020019601	lrrc47	100	99.106	ENSORLG00015014040	lrrc47	100	99.106	Oryzias_latipes_hsok
ENSORLG00020019601	lrrc47	100	91.950	ENSOMEG00000008989	lrrc47	100	91.950	Oryzias_melastigma
ENSORLG00020019601	lrrc47	99	55.345	ENSOGAG00000001553	LRRC47	99	54.922	Otolemur_garnettii
ENSORLG00020019601	lrrc47	99	53.299	ENSOARG00000015290	LRRC47	99	52.921	Ovis_aries
ENSORLG00020019601	lrrc47	75	58.314	ENSPPAG00000036370	-	98	58.237	Pan_paniscus
ENSORLG00020019601	lrrc47	99	54.609	ENSPPRG00000005261	LRRC47	98	54.783	Panthera_pardus
ENSORLG00020019601	lrrc47	99	54.861	ENSPTRG00000000068	LRRC47	99	54.828	Pan_troglodytes
ENSORLG00020019601	lrrc47	99	55.459	ENSPANG00000012437	LRRC47	99	55.459	Papio_anubis
ENSORLG00020019601	lrrc47	66	62.069	ENSPSIG00000004196	LRRC47	99	62.069	Pelodiscus_sinensis
ENSORLG00020019601	lrrc47	66	61.867	ENSPEMG00000021068	Lrrc47	99	61.436	Peromyscus_maniculatus_bairdii
ENSORLG00020019601	lrrc47	99	56.643	ENSPCIG00000003638	LRRC47	98	57.068	Phascolarctos_cinereus
ENSORLG00020019601	lrrc47	94	78.598	ENSPFOG00000000992	lrrc47	94	76.705	Poecilia_formosa
ENSORLG00020019601	lrrc47	100	78.712	ENSPLAG00000008077	lrrc47	100	76.923	Poecilia_latipinna
ENSORLG00020019601	lrrc47	100	78.354	ENSPMEG00000007367	lrrc47	100	76.565	Poecilia_mexicana
ENSORLG00020019601	lrrc47	99	54.514	ENSPPYG00000001960	LRRC47	99	54.483	Pongo_abelii
ENSORLG00020019601	lrrc47	99	54.514	ENSPCOG00000019161	LRRC47	99	54.404	Propithecus_coquereli
ENSORLG00020019601	lrrc47	99	54.371	ENSPVAG00000009839	LRRC47	99	53.288	Pteropus_vampyrus
ENSORLG00020019601	lrrc47	99	63.766	ENSPNAG00000017982	lrrc47	99	63.475	Pygocentrus_nattereri
ENSORLG00020019601	lrrc47	99	55.536	ENSRNOG00000024796	Lrrc47	99	55.709	Rattus_norvegicus
ENSORLG00020019601	lrrc47	99	55.459	ENSRBIG00000019437	LRRC47	99	55.459	Rhinopithecus_bieti
ENSORLG00020019601	lrrc47	99	55.459	ENSRROG00000043182	LRRC47	99	55.459	Rhinopithecus_roxellana
ENSORLG00020019601	lrrc47	79	57.080	ENSSBOG00000026334	LRRC47	92	57.018	Saimiri_boliviensis_boliviensis
ENSORLG00020019601	lrrc47	99	49.393	ENSSHAG00000007360	LRRC47	98	49.135	Sarcophilus_harrisii
ENSORLG00020019601	lrrc47	100	79.286	ENSSMAG00000009344	lrrc47	100	79.286	Scophthalmus_maximus
ENSORLG00020019601	lrrc47	100	81.216	ENSSDUG00000014618	lrrc47	100	81.216	Seriola_dumerili
ENSORLG00020019601	lrrc47	100	81.395	ENSSLDG00000018908	lrrc47	100	81.395	Seriola_lalandi_dorsalis
ENSORLG00020019601	lrrc47	99	52.241	ENSSPUG00000010277	LRRC47	98	52.931	Sphenodon_punctatus
ENSORLG00020019601	lrrc47	100	82.290	ENSSPAG00000005188	lrrc47	100	82.290	Stegastes_partitus
ENSORLG00020019601	lrrc47	99	55.478	ENSSSCG00000039516	LRRC47	98	55.095	Sus_scrofa
ENSORLG00020019601	lrrc47	71	60.859	ENSTGUG00000002737	LRRC47	98	60.859	Taeniopygia_guttata
ENSORLG00020019601	lrrc47	100	76.208	ENSTRUG00000017696	lrrc47	100	76.029	Takifugu_rubripes
ENSORLG00020019601	lrrc47	100	73.703	ENSTNIG00000010923	lrrc47	99	74.597	Tetraodon_nigroviridis
ENSORLG00020019601	lrrc47	99	54.419	ENSTTRG00000011751	LRRC47	99	54.419	Tursiops_truncatus
ENSORLG00020019601	lrrc47	89	56.647	ENSUAMG00000012080	LRRC47	98	56.597	Ursus_americanus
ENSORLG00020019601	lrrc47	66	61.111	ENSUMAG00000010781	LRRC47	80	61.111	Ursus_maritimus
ENSORLG00020019601	lrrc47	97	52.482	ENSVVUG00000027118	LRRC47	96	52.482	Vulpes_vulpes
ENSORLG00020019601	lrrc47	99	57.754	ENSXETG00000006029	lrrc47	98	57.420	Xenopus_tropicalis
ENSORLG00020019601	lrrc47	99	77.939	ENSXCOG00000002813	lrrc47	98	76.311	Xiphophorus_couchianus
ENSORLG00020019601	lrrc47	99	77.215	ENSXMAG00000019386	lrrc47	99	76.673	Xiphophorus_maculatus