EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020019863 (Gene tree)
Gene ID: -
Gene Symbol: rbm27
Alias: -
Full Name: RNA binding motif protein 27
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 18982 bases
Position: chr14:5957637-5976618
Accession: ZDB-GENE-110411-31
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020018898	RRM_1	PF00076.22	3.3e-07	1	1
ENSORLP00020018898	PWI	PF01480.17	5.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020027846	-	6114	-	ENSORLP00020018898	1047 (aa)	-	-

Gene Model

Click here to download ENSORLG00020019863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019863's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020019863	rbm27	68	55.556	ENSORLG00020017599	rbm26	81	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019863	rbm27	95	45.714	ENSG00000091009	RBM27	75	82.796	Homo_sapiens
ENSORLG00020019863	rbm27	82	81.618	ENSAPOG00000000301	rbm27	100	78.093	Acanthochromis_polyacanthus
ENSORLG00020019863	rbm27	95	44.664	ENSAMEG00000017593	-	75	82.796	Ailuropoda_melanoleuca
ENSORLG00020019863	rbm27	78	75.298	ENSACIG00000014111	rbm27	82	75.682	Amphilophus_citrinellus
ENSORLG00020019863	rbm27	82	80.578	ENSAOCG00000016767	rbm27	100	78.281	Amphiprion_ocellaris
ENSORLG00020019863	rbm27	82	80.925	ENSAPEG00000017681	rbm27	100	78.281	Amphiprion_percula
ENSORLG00020019863	rbm27	82	77.083	ENSATEG00000010385	rbm27	100	75.947	Anabas_testudineus
ENSORLG00020019863	rbm27	57	48.450	ENSAPLG00000009309	-	86	85.714	Anas_platyrhynchos
ENSORLG00020019863	rbm27	64	40.469	ENSAPLG00000011536	RBM26	72	39.487	Anas_platyrhynchos
ENSORLG00020019863	rbm27	95	46.878	ENSANAG00000034039	-	75	82.796	Aotus_nancymaae
ENSORLG00020019863	rbm27	100	78.443	ENSACLG00000010782	rbm27	100	78.727	Astatotilapia_calliptera
ENSORLG00020019863	rbm27	84	42.105	ENSAMXG00000012398	rbm26	78	72.527	Astyanax_mexicanus
ENSORLG00020019863	rbm27	100	59.907	ENSAMXG00000029605	rbm27	100	61.575	Astyanax_mexicanus
ENSORLG00020019863	rbm27	95	46.118	ENSBTAG00000011642	RBM27	87	82.796	Bos_taurus
ENSORLG00020019863	rbm27	93	50.568	ENSCJAG00000021308	-	87	75.581	Callithrix_jacchus
ENSORLG00020019863	rbm27	95	45.430	ENSCAFG00000006456	-	75	82.796	Canis_familiaris
ENSORLG00020019863	rbm27	64	40.413	ENSCAFG00020024152	RBM26	76	40.168	Canis_lupus_dingo
ENSORLG00020019863	rbm27	94	44.617	ENSCAFG00020024931	-	74	80.822	Canis_lupus_dingo
ENSORLG00020019863	rbm27	95	44.933	ENSCHIG00000009045	-	87	82.796	Capra_hircus
ENSORLG00020019863	rbm27	93	50.142	ENSTSYG00000004303	-	72	82.796	Carlito_syrichta
ENSORLG00020019863	rbm27	71	79.487	ENSCPOG00000021081	RBM26	89	79.487	Cavia_porcellus
ENSORLG00020019863	rbm27	81	46.009	ENSCPOG00000002498	-	84	80.645	Cavia_porcellus
ENSORLG00020019863	rbm27	85	50.284	ENSCCAG00000015866	-	86	80.822	Cebus_capucinus
ENSORLG00020019863	rbm27	94	44.973	ENSCATG00000035545	-	87	80.822	Cercocebus_atys
ENSORLG00020019863	rbm27	95	46.255	ENSCLAG00000016106	-	75	82.796	Chinchilla_lanigera
ENSORLG00020019863	rbm27	54	49.327	ENSCSAG00000012270	-	75	82.796	Chlorocebus_sabaeus
ENSORLG00020019863	rbm27	72	91.026	ENSCHOG00000002831	-	82	77.778	Choloepus_hoffmanni
ENSORLG00020019863	rbm27	81	49.606	ENSCING00000003516	zf(c3h)-9	75	65.385	Ciona_intestinalis
ENSORLG00020019863	rbm27	95	46.283	ENSCANG00000040932	-	78	46.294	Colobus_angolensis_palliatus
ENSORLG00020019863	rbm27	89	47.384	ENSCGRG00001018200	Rbm27	76	45.888	Cricetulus_griseus_chok1gshd
ENSORLG00020019863	rbm27	94	45.802	ENSCGRG00000006403	Rbm27	73	81.081	Cricetulus_griseus_crigri
ENSORLG00020019863	rbm27	58	41.026	ENSCGRG00000006579	Rbm26	89	45.455	Cricetulus_griseus_crigri
ENSORLG00020019863	rbm27	70	63.333	ENSCSEG00000016514	rbm26	80	68.627	Cynoglossus_semilaevis
ENSORLG00020019863	rbm27	100	73.987	ENSCSEG00000014910	rbm27	100	72.830	Cynoglossus_semilaevis
ENSORLG00020019863	rbm27	85	88.660	ENSCVAG00000014585	rbm27	91	86.275	Cyprinodon_variegatus
ENSORLG00020019863	rbm27	69	62.069	ENSCVAG00000015295	rbm26	79	67.647	Cyprinodon_variegatus
ENSORLG00020019863	rbm27	61	63.863	ENSDARG00000060521	rbm27	96	63.248	Danio_rerio
ENSORLG00020019863	rbm27	64	40.560	ENSDNOG00000004726	RBM26	75	40.288	Dasypus_novemcinctus
ENSORLG00020019863	rbm27	62	44.521	ENSDNOG00000019753	-	75	77.778	Dasypus_novemcinctus
ENSORLG00020019863	rbm27	64	40.118	ENSDORG00000006232	Rbm26	75	39.809	Dipodomys_ordii
ENSORLG00020019863	rbm27	79	58.824	ENSDORG00000013392	Rbm27	75	82.796	Dipodomys_ordii
ENSORLG00020019863	rbm27	56	55.882	FBgn0002044	swm	54	57.692	Drosophila_melanogaster
ENSORLG00020019863	rbm27	54	43.784	ENSEBUG00000003376	rbm26	76	44.828	Eptatretus_burgeri
ENSORLG00020019863	rbm27	62	44.847	ENSEASG00005020588	-	73	65.657	Equus_asinus_asinus
ENSORLG00020019863	rbm27	95	44.223	ENSECAG00000000883	-	83	77.778	Equus_caballus
ENSORLG00020019863	rbm27	54	47.892	ENSEEUG00000010335	-	75	77.419	Erinaceus_europaeus
ENSORLG00020019863	rbm27	100	61.639	ENSELUG00000023148	rbm27	82	61.804	Esox_lucius
ENSORLG00020019863	rbm27	84	86.667	ENSELUG00000003110	rbm26	79	86.667	Esox_lucius
ENSORLG00020019863	rbm27	95	45.923	ENSFCAG00000005792	-	87	82.796	Felis_catus
ENSORLG00020019863	rbm27	83	50.174	ENSFALG00000003228	-	60	82.353	Ficedula_albicollis
ENSORLG00020019863	rbm27	64	40.030	ENSFDAG00000011365	RBM26	76	39.857	Fukomys_damarensis
ENSORLG00020019863	rbm27	93	49.714	ENSFDAG00000017029	-	75	81.720	Fukomys_damarensis
ENSORLG00020019863	rbm27	100	76.598	ENSFHEG00000010494	rbm27	100	75.658	Fundulus_heteroclitus
ENSORLG00020019863	rbm27	90	82.353	ENSGMOG00000013610	rbm27	90	83.838	Gadus_morhua
ENSORLG00020019863	rbm27	54	52.850	ENSGALG00000007516	-	80	48.256	Gallus_gallus
ENSORLG00020019863	rbm27	82	75.433	ENSGAFG00000005005	rbm27	100	76.371	Gambusia_affinis
ENSORLG00020019863	rbm27	90	59.350	ENSGAFG00000011966	rbm26	79	67.647	Gambusia_affinis
ENSORLG00020019863	rbm27	82	67.401	ENSGACG00000020719	rbm27	100	70.082	Gasterosteus_aculeatus
ENSORLG00020019863	rbm27	95	45.959	ENSGAGG00000002126	-	80	46.493	Gopherus_agassizii
ENSORLG00020019863	rbm27	100	44.578	ENSGGOG00000013312	-	87	70.968	Gorilla_gorilla
ENSORLG00020019863	rbm27	100	78.422	ENSHBUG00000003077	rbm27	100	78.707	Haplochromis_burtoni
ENSORLG00020019863	rbm27	93	49.429	ENSHGLG00000004076	RBM27	75	81.720	Heterocephalus_glaber_female
ENSORLG00020019863	rbm27	85	47.384	ENSHGLG00100003022	-	72	79.452	Heterocephalus_glaber_male
ENSORLG00020019863	rbm27	89	76.829	ENSHCOG00000003684	rbm27	100	71.727	Hippocampus_comes
ENSORLG00020019863	rbm27	65	60.972	ENSIPUG00000012280	rbm27	100	62.160	Ictalurus_punctatus
ENSORLG00020019863	rbm27	93	50.427	ENSSTOG00000002378	-	75	82.796	Ictidomys_tridecemlineatus
ENSORLG00020019863	rbm27	64	40.265	ENSJJAG00000022458	Rbm26	76	39.928	Jaculus_jaculus
ENSORLG00020019863	rbm27	95	43.412	ENSJJAG00000010911	Rbm27	88	95.000	Jaculus_jaculus
ENSORLG00020019863	rbm27	100	78.175	ENSKMAG00000009801	rbm27	100	78.759	Kryptolebias_marmoratus
ENSORLG00020019863	rbm27	58	40.857	ENSKMAG00000021802	rbm26	71	40.476	Kryptolebias_marmoratus
ENSORLG00020019863	rbm27	82	78.291	ENSLBEG00000025151	rbm27	100	77.286	Labrus_bergylta
ENSORLG00020019863	rbm27	95	47.220	ENSLACG00000008729	rbm27	90	77.551	Latimeria_chalumnae
ENSORLG00020019863	rbm27	96	60.370	ENSLOCG00000010426	rbm27	99	60.204	Lepisosteus_oculatus
ENSORLG00020019863	rbm27	64	40.560	ENSLAFG00000010689	RBM26	75	40.167	Loxodonta_africana
ENSORLG00020019863	rbm27	95	45.875	ENSLAFG00000022447	-	74	82.796	Loxodonta_africana
ENSORLG00020019863	rbm27	95	47.259	ENSMFAG00000042337	-	87	82.796	Macaca_fascicularis
ENSORLG00020019863	rbm27	95	45.781	ENSMMUG00000004476	RBM27	87	82.796	Macaca_mulatta
ENSORLG00020019863	rbm27	93	44.828	ENSMNEG00000037798	-	88	45.937	Macaca_nemestrina
ENSORLG00020019863	rbm27	95	43.490	ENSMLEG00000032857	-	75	82.796	Mandrillus_leucophaeus
ENSORLG00020019863	rbm27	78	73.780	ENSMAMG00000021382	rbm27	79	73.945	Mastacembelus_armatus
ENSORLG00020019863	rbm27	100	78.348	ENSMZEG00005002635	rbm27	100	78.632	Maylandia_zebra
ENSORLG00020019863	rbm27	69	78.333	ENSMGAG00000014927	RBM26	79	74.286	Meleagris_gallopavo
ENSORLG00020019863	rbm27	83	50.351	ENSMGAG00000009467	-	82	68.889	Meleagris_gallopavo
ENSORLG00020019863	rbm27	95	46.822	ENSMAUG00000007657	Rbm27	72	83.871	Mesocricetus_auratus
ENSORLG00020019863	rbm27	95	45.968	ENSMICG00000003262	-	87	82.796	Microcebus_murinus
ENSORLG00020019863	rbm27	95	46.998	ENSMOCG00000019479	Rbm27	87	82.796	Microtus_ochrogaster
ENSORLG00020019863	rbm27	75	54.088	ENSMMOG00000018170	rbm26	77	77.778	Mola_mola
ENSORLG00020019863	rbm27	85	50.909	ENSMODG00000010182	-	76	82.796	Monodelphis_domestica
ENSORLG00020019863	rbm27	100	69.933	ENSMALG00000018514	rbm27	85	74.074	Monopterus_albus
ENSORLG00020019863	rbm27	95	46.598	MGP_CAROLIEiJ_G0022226	Rbm27	72	82.796	Mus_caroli
ENSORLG00020019863	rbm27	95	46.262	ENSMUSG00000024491	Rbm27	72	82.796	Mus_musculus
ENSORLG00020019863	rbm27	95	46.692	MGP_PahariEiJ_G0018959	Rbm27	72	82.796	Mus_pahari
ENSORLG00020019863	rbm27	95	46.592	MGP_SPRETEiJ_G0023136	Rbm27	72	82.796	Mus_spretus
ENSORLG00020019863	rbm27	96	44.385	ENSMPUG00000007832	-	75	82.796	Mustela_putorius_furo
ENSORLG00020019863	rbm27	70	71.429	ENSMLUG00000003386	RBM26	79	71.429	Myotis_lucifugus
ENSORLG00020019863	rbm27	85	50.000	ENSMLUG00000000643	-	75	82.796	Myotis_lucifugus
ENSORLG00020019863	rbm27	93	50.000	ENSNGAG00000016316	Rbm27	75	82.796	Nannospalax_galili
ENSORLG00020019863	rbm27	71	60.976	ENSNBRG00000018981	rbm26	84	67.647	Neolamprologus_brichardi
ENSORLG00020019863	rbm27	100	79.640	ENSNBRG00000005739	rbm27	100	79.640	Neolamprologus_brichardi
ENSORLG00020019863	rbm27	94	44.968	ENSNLEG00000009886	-	87	74.390	Nomascus_leucogenys
ENSORLG00020019863	rbm27	64	47.015	ENSMEUG00000004031	-	51	80.435	Notamacropus_eugenii
ENSORLG00020019863	rbm27	78	63.717	ENSOPRG00000005424	-	72	72.414	Ochotona_princeps
ENSORLG00020019863	rbm27	95	45.594	ENSODEG00000005515	-	85	82.796	Octodon_degus
ENSORLG00020019863	rbm27	82	79.215	ENSONIG00000008506	rbm27	100	77.264	Oreochromis_niloticus
ENSORLG00020019863	rbm27	64	39.941	ENSOANG00000001531	RBM26	75	39.568	Ornithorhynchus_anatinus
ENSORLG00020019863	rbm27	95	45.609	ENSOCUG00000000186	-	87	81.720	Oryctolagus_cuniculus
ENSORLG00020019863	rbm27	61	41.358	ENSORLG00000004434	rbm26	70	40.798	Oryzias_latipes
ENSORLG00020019863	rbm27	100	99.045	ENSORLG00000001645	rbm27	100	99.045	Oryzias_latipes
ENSORLG00020019863	rbm27	100	99.331	ENSORLG00015003753	rbm27	100	99.331	Oryzias_latipes_hsok
ENSORLG00020019863	rbm27	100	91.107	ENSOMEG00000005785	rbm27	100	92.621	Oryzias_melastigma
ENSORLG00020019863	rbm27	95	43.706	ENSOGAG00000008758	-	75	82.796	Otolemur_garnettii
ENSORLG00020019863	rbm27	58	41.868	ENSOGAG00000009171	RBM26	75	40.120	Otolemur_garnettii
ENSORLG00020019863	rbm27	95	45.587	ENSOARG00000002840	-	87	82.796	Ovis_aries
ENSORLG00020019863	rbm27	95	46.555	ENSPPAG00000039646	-	87	70.968	Pan_paniscus
ENSORLG00020019863	rbm27	95	44.784	ENSPPRG00000021227	-	87	82.796	Panthera_pardus
ENSORLG00020019863	rbm27	95	44.784	ENSPTIG00000013051	-	87	82.796	Panthera_tigris_altaica
ENSORLG00020019863	rbm27	95	46.555	ENSPTRG00000017373	-	87	70.968	Pan_troglodytes
ENSORLG00020019863	rbm27	94	44.850	ENSPANG00000015776	-	87	80.822	Papio_anubis
ENSORLG00020019863	rbm27	61	47.887	ENSPKIG00000024548	-	74	45.006	Paramormyrops_kingsleyae
ENSORLG00020019863	rbm27	100	58.365	ENSPKIG00000006776	-	100	57.860	Paramormyrops_kingsleyae
ENSORLG00020019863	rbm27	64	39.766	ENSPSIG00000007431	RBM26	76	38.443	Pelodiscus_sinensis
ENSORLG00020019863	rbm27	75	65.955	ENSPMGG00000019541	rbm27	97	65.822	Periophthalmus_magnuspinnatus
ENSORLG00020019863	rbm27	93	50.000	ENSPEMG00000014312	Rbm27	74	82.796	Peromyscus_maniculatus_bairdii
ENSORLG00020019863	rbm27	83	48.915	ENSPCIG00000025797	-	83	80.822	Phascolarctos_cinereus
ENSORLG00020019863	rbm27	100	75.755	ENSPFOG00000003105	rbm27	100	75.377	Poecilia_formosa
ENSORLG00020019863	rbm27	100	75.071	ENSPLAG00000000373	rbm27	100	74.221	Poecilia_latipinna
ENSORLG00020019863	rbm27	100	75.755	ENSPMEG00000018569	rbm27	100	75.377	Poecilia_mexicana
ENSORLG00020019863	rbm27	81	74.332	ENSPREG00000005827	rbm27	97	74.681	Poecilia_reticulata
ENSORLG00020019863	rbm27	89	59.350	ENSPREG00000021003	rbm26	78	67.647	Poecilia_reticulata
ENSORLG00020019863	rbm27	95	45.804	ENSPPYG00000015909	-	75	82.796	Pongo_abelii
ENSORLG00020019863	rbm27	59	41.054	ENSPCOG00000017206	RBM26	69	40.665	Propithecus_coquereli
ENSORLG00020019863	rbm27	80	50.000	ENSPCOG00000022256	-	83	82.796	Propithecus_coquereli
ENSORLG00020019863	rbm27	95	44.274	ENSPVAG00000005218	-	75	82.796	Pteropus_vampyrus
ENSORLG00020019863	rbm27	100	78.992	ENSPNYG00000015348	rbm27	100	79.278	Pundamilia_nyererei
ENSORLG00020019863	rbm27	95	43.855	ENSPNAG00000003024	rbm26	78	67.308	Pygocentrus_nattereri
ENSORLG00020019863	rbm27	59	61.551	ENSPNAG00000027218	rbm27	100	62.313	Pygocentrus_nattereri
ENSORLG00020019863	rbm27	93	50.286	ENSRNOG00000027250	Rbm27	75	82.796	Rattus_norvegicus
ENSORLG00020019863	rbm27	95	44.604	ENSRROG00000043836	-	75	82.796	Rhinopithecus_roxellana
ENSORLG00020019863	rbm27	74	48.000	ENSSBOG00000031813	RBM26	80	79.487	Saimiri_boliviensis_boliviensis
ENSORLG00020019863	rbm27	93	50.000	ENSSBOG00000034172	-	86	80.822	Saimiri_boliviensis_boliviensis
ENSORLG00020019863	rbm27	75	49.583	ENSSHAG00000006988	-	87	43.716	Sarcophilus_harrisii
ENSORLG00020019863	rbm27	96	58.655	ENSSFOG00015018009	rbm27	81	58.219	Scleropages_formosus
ENSORLG00020019863	rbm27	53	43.717	ENSSFOG00015005311	rbm26	76	41.139	Scleropages_formosus
ENSORLG00020019863	rbm27	95	38.210	ENSSFOG00015003102	RBM26	71	38.523	Scleropages_formosus
ENSORLG00020019863	rbm27	100	71.067	ENSSMAG00000004138	rbm27	100	69.887	Scophthalmus_maximus
ENSORLG00020019863	rbm27	100	78.794	ENSSDUG00000021085	rbm27	100	78.040	Seriola_dumerili
ENSORLG00020019863	rbm27	100	79.206	ENSSLDG00000006922	rbm27	100	78.733	Seriola_lalandi_dorsalis
ENSORLG00020019863	rbm27	54	48.061	ENSSARG00000000313	-	62	75.342	Sorex_araneus
ENSORLG00020019863	rbm27	89	46.644	ENSSPUG00000013753	-	89	63.014	Sphenodon_punctatus
ENSORLG00020019863	rbm27	78	75.908	ENSSPAG00000012000	rbm27	81	74.913	Stegastes_partitus
ENSORLG00020019863	rbm27	83	49.138	ENSTGUG00000000085	-	89	83.333	Taeniopygia_guttata
ENSORLG00020019863	rbm27	100	68.471	ENSTRUG00000004518	rbm27	82	70.534	Takifugu_rubripes
ENSORLG00020019863	rbm27	100	62.387	ENSTNIG00000018215	rbm27	75	67.384	Tetraodon_nigroviridis
ENSORLG00020019863	rbm27	54	80.822	ENSTBEG00000004337	-	68	80.822	Tupaia_belangeri
ENSORLG00020019863	rbm27	95	44.734	ENSTTRG00000016713	-	87	82.796	Tursiops_truncatus
ENSORLG00020019863	rbm27	88	42.788	ENSUAMG00000019864	-	73	43.587	Ursus_americanus
ENSORLG00020019863	rbm27	64	40.209	ENSUMAG00000013370	RBM26	75	40.000	Ursus_maritimus
ENSORLG00020019863	rbm27	91	42.647	ENSUMAG00000010569	-	80	44.530	Ursus_maritimus
ENSORLG00020019863	rbm27	75	67.769	ENSVPAG00000000558	-	61	82.796	Vicugna_pacos
ENSORLG00020019863	rbm27	95	46.636	ENSVVUG00000021131	-	75	82.796	Vulpes_vulpes
ENSORLG00020019863	rbm27	96	45.954	ENSXETG00000002322	rbm27	79	46.014	Xenopus_tropicalis
ENSORLG00020019863	rbm27	57	41.694	ENSXETG00000017810	rbm26	96	42.240	Xenopus_tropicalis
ENSORLG00020019863	rbm27	89	59.350	ENSXCOG00000001827	rbm26	88	67.647	Xiphophorus_couchianus
ENSORLG00020019863	rbm27	64	76.970	ENSXCOG00000005859	rbm27	72	78.788	Xiphophorus_couchianus
ENSORLG00020019863	rbm27	100	75.921	ENSXMAG00000001413	rbm27	100	75.165	Xiphophorus_maculatus
ENSORLG00020019863	rbm27	73	59.350	ENSXMAG00000001679	rbm26	79	67.647	Xiphophorus_maculatus