EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020019901 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 2670 bases
Position: chr21:21480462-21483131
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020018937	RVT_1	PF00078.27	1.7e-45	1	1
ENSORLP00020018937	RNase_H	PF00075.24	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020027911	-	2670	-	ENSORLP00020018937	889 (aa)	-	-

Gene Model

Click here to download ENSORLG00020019901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019901's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020019901	-	100	99.775	ENSORLG00020020238	-	71	99.775
ENSORLG00020019901	-	100	99.775	ENSORLG00020011427	-	71	99.775
ENSORLG00020019901	-	100	100.000	ENSORLG00020018543	-	71	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019901	-	100	44.804	ENSAMXG00000043500	-	71	44.804	Astyanax_mexicanus
ENSORLG00020019901	-	100	46.249	ENSDARG00000103037	CR848788.1	71	46.249	Danio_rerio
ENSORLG00020019901	-	100	45.434	ENSDARG00000103436	BX548028.1	71	45.434	Danio_rerio
ENSORLG00020019901	-	100	46.361	ENSDARG00000099201	BX908731.1	71	46.361	Danio_rerio
ENSORLG00020019901	-	91	47.917	ENSKMAG00000021014	-	100	47.917	Kryptolebias_marmoratus
ENSORLG00020019901	-	95	46.019	ENSKMAG00000012711	-	100	46.019	Kryptolebias_marmoratus
ENSORLG00020019901	-	100	45.940	ENSKMAG00000004415	-	71	45.940	Kryptolebias_marmoratus
ENSORLG00020019901	-	100	45.940	ENSKMAG00000003982	-	71	45.940	Kryptolebias_marmoratus
ENSORLG00020019901	-	100	97.188	ENSORLG00000023592	-	71	97.188	Oryzias_latipes
ENSORLG00020019901	-	100	97.188	ENSORLG00000026314	-	71	97.188	Oryzias_latipes
ENSORLG00020019901	-	100	97.525	ENSORLG00000027174	-	71	97.525	Oryzias_latipes
ENSORLG00020019901	-	100	98.988	ENSORLG00000024423	-	71	98.988	Oryzias_latipes
ENSORLG00020019901	-	83	97.826	ENSORLG00015013792	-	67	97.826	Oryzias_latipes_hsok
ENSORLG00020019901	-	79	47.869	ENSOMEG00000003836	-	65	47.869	Oryzias_melastigma
ENSORLG00020019901	-	96	46.759	ENSPKIG00000019189	-	68	46.759	Paramormyrops_kingsleyae
ENSORLG00020019901	-	99	47.098	ENSXMAG00000021755	-	71	47.052	Xiphophorus_maculatus
ENSORLG00020019901	-	99	47.098	ENSXMAG00000021070	-	71	47.052	Xiphophorus_maculatus
ENSORLG00020019901	-	88	46.465	ENSXMAG00000023377	-	100	46.465	Xiphophorus_maculatus
ENSORLG00020019901	-	99	45.676	ENSXMAG00000027130	-	86	45.676	Xiphophorus_maculatus
ENSORLG00020019901	-	94	46.651	ENSXMAG00000029923	-	86	45.344	Xiphophorus_maculatus
ENSORLG00020019901	-	96	47.277	ENSXMAG00000026248	-	76	47.277	Xiphophorus_maculatus
ENSORLG00020019901	-	99	46.763	ENSXMAG00000028309	-	71	46.830	Xiphophorus_maculatus
ENSORLG00020019901	-	96	47.277	ENSXMAG00000022223	-	76	47.277	Xiphophorus_maculatus
ENSORLG00020019901	-	85	46.194	ENSXMAG00000020874	-	83	46.194	Xiphophorus_maculatus
ENSORLG00020019901	-	94	46.769	ENSXMAG00000023078	-	86	45.455	Xiphophorus_maculatus
ENSORLG00020019901	-	85	39.843	ENSXMAG00000025430	-	99	39.843	Xiphophorus_maculatus
ENSORLG00020019901	-	96	47.277	ENSXMAG00000026588	-	76	47.277	Xiphophorus_maculatus
ENSORLG00020019901	-	100	45.880	ENSXMAG00000021061	-	71	45.880	Xiphophorus_maculatus
ENSORLG00020019901	-	96	45.423	ENSXMAG00000029466	-	74	45.423	Xiphophorus_maculatus
ENSORLG00020019901	-	90	46.040	ENSXMAG00000023126	-	100	46.040	Xiphophorus_maculatus
ENSORLG00020019901	-	95	45.285	ENSXMAG00000024143	-	96	45.285	Xiphophorus_maculatus