EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020019950 (Gene tree)
Gene ID: -
Gene Symbol: larsb
Alias: -
Full Name: leucyl-tRNA synthetase b
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 24367 bases
Position: chr14:5934013-5958379
Accession: ZDB-GENE-030114-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020033740	tRNA-synt_1g	PF09334.11	2.3e-17	1	2
ENSORLP00020033740	tRNA-synt_1g	PF09334.11	2.3e-17	2	2
ENSORLP00020018964	tRNA-synt_1g	PF09334.11	2.5e-17	1	2
ENSORLP00020018964	tRNA-synt_1g	PF09334.11	2.5e-17	2	2
ENSORLP00020033740	Anticodon_1	PF08264.13	3.4e-14	1	1
ENSORLP00020018964	Anticodon_1	PF08264.13	3.5e-14	1	1
ENSORLP00020033740	tRNA-synt_1	PF00133.22	6.2e-39	1	2
ENSORLP00020033740	tRNA-synt_1	PF00133.22	6.2e-39	2	2
ENSORLP00020018964	tRNA-synt_1	PF00133.22	3.9e-38	1	2
ENSORLP00020018964	tRNA-synt_1	PF00133.22	3.9e-38	2	2
ENSORLP00020033740	tRNA-synt_1e	PF01406.19	9.8e-07	1	1
ENSORLP00020018964	tRNA-synt_1e	PF01406.19	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020027944	-	5100	-	ENSORLP00020018964	1184 (aa)	-	-
ENSORLT00020027864	-	3492	-	ENSORLP00020033740	1163 (aa)	-	-

Gene Model

Click here to download ENSORLG00020019950's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020019950's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020019950	larsb	100	77.449	ENSG00000133706	LARS	100	78.699	Homo_sapiens
ENSORLG00020019950	larsb	100	93.086	ENSAPOG00000010585	larsb	100	93.393	Acanthochromis_polyacanthus
ENSORLG00020019950	larsb	99	78.455	ENSAMEG00000017584	LARS	100	78.125	Ailuropoda_melanoleuca
ENSORLG00020019950	larsb	100	91.147	ENSACIG00000014026	larsb	100	91.147	Amphilophus_citrinellus
ENSORLG00020019950	larsb	100	93.834	ENSAOCG00000016931	larsb	100	93.834	Amphiprion_ocellaris
ENSORLG00020019950	larsb	100	93.919	ENSAPEG00000017720	larsb	100	93.919	Amphiprion_percula
ENSORLG00020019950	larsb	100	87.268	ENSATEG00000010441	larsb	99	87.015	Anabas_testudineus
ENSORLG00020019950	larsb	98	79.754	ENSAPLG00000008145	LARS	100	79.577	Anas_platyrhynchos
ENSORLG00020019950	larsb	100	77.280	ENSACAG00000013916	LARS	100	77.365	Anolis_carolinensis
ENSORLG00020019950	larsb	100	69.257	ENSANAG00000014375	LARS	100	69.257	Aotus_nancymaae
ENSORLG00020019950	larsb	100	92.483	ENSACLG00000010881	larsb	100	92.483	Astatotilapia_calliptera
ENSORLG00020019950	larsb	100	87.679	ENSAMXG00000019979	larsb	100	87.511	Astyanax_mexicanus
ENSORLG00020019950	larsb	100	77.534	ENSBTAG00000006765	LARS	100	77.534	Bos_taurus
ENSORLG00020019950	larsb	99	55.290	WBGene00003073	lars-1	99	54.950	Caenorhabditis_elegans
ENSORLG00020019950	larsb	100	77.618	ENSCJAG00000021314	LARS	100	78.788	Callithrix_jacchus
ENSORLG00020019950	larsb	100	78.378	ENSCAFG00000006431	LARS	100	78.378	Canis_familiaris
ENSORLG00020019950	larsb	99	78.762	ENSCAFG00020025009	LARS	99	78.762	Canis_lupus_dingo
ENSORLG00020019950	larsb	100	77.703	ENSCHIG00000014949	LARS	100	77.703	Capra_hircus
ENSORLG00020019950	larsb	100	77.365	ENSTSYG00000001253	LARS	100	77.365	Carlito_syrichta
ENSORLG00020019950	larsb	97	62.379	ENSCAPG00000015676	LARS	97	62.643	Cavia_aperea
ENSORLG00020019950	larsb	100	76.858	ENSCPOG00000012329	LARS	100	76.858	Cavia_porcellus
ENSORLG00020019950	larsb	100	77.787	ENSCCAG00000020789	LARS	100	77.787	Cebus_capucinus
ENSORLG00020019950	larsb	98	78.196	ENSCATG00000033463	LARS	100	78.520	Cercocebus_atys
ENSORLG00020019950	larsb	100	77.196	ENSCLAG00000011193	LARS	100	77.196	Chinchilla_lanigera
ENSORLG00020019950	larsb	99	77.826	ENSCSAG00000012280	LARS	97	77.455	Chlorocebus_sabaeus
ENSORLG00020019950	larsb	90	71.147	ENSCHOG00000009309	LARS	90	70.862	Choloepus_hoffmanni
ENSORLG00020019950	larsb	99	80.241	ENSCPBG00000008415	LARS	99	80.179	Chrysemys_picta_bellii
ENSORLG00020019950	larsb	98	65.126	ENSCING00000008535	-	98	63.870	Ciona_intestinalis
ENSORLG00020019950	larsb	99	63.388	ENSCSAVG00000009040	-	100	67.762	Ciona_savignyi
ENSORLG00020019950	larsb	100	77.449	ENSCANG00000031137	LARS	100	77.449	Colobus_angolensis_palliatus
ENSORLG00020019950	larsb	94	72.802	ENSCGRG00001004647	Lars	99	72.802	Cricetulus_griseus_chok1gshd
ENSORLG00020019950	larsb	100	74.093	ENSCGRG00000007284	Lars	100	74.093	Cricetulus_griseus_crigri
ENSORLG00020019950	larsb	100	92.159	ENSCSEG00000014984	larsb	100	91.906	Cynoglossus_semilaevis
ENSORLG00020019950	larsb	100	93.412	ENSCVAG00000014685	larsb	100	93.412	Cyprinodon_variegatus
ENSORLG00020019950	larsb	69	87.109	ENSDARG00000019280	larsb	100	87.109	Danio_rerio
ENSORLG00020019950	larsb	98	77.261	ENSDNOG00000017963	LARS	100	77.788	Dasypus_novemcinctus
ENSORLG00020019950	larsb	100	72.766	ENSDORG00000014913	Lars	100	72.766	Dipodomys_ordii
ENSORLG00020019950	larsb	99	58.497	FBgn0284253	LeuRS	99	58.924	Drosophila_melanogaster
ENSORLG00020019950	larsb	94	62.831	ENSETEG00000003145	LARS	100	62.747	Echinops_telfairi
ENSORLG00020019950	larsb	92	60.688	ENSEBUG00000014985	larsb	97	60.200	Eptatretus_burgeri
ENSORLG00020019950	larsb	100	78.294	ENSEASG00005020569	LARS	100	79.020	Equus_asinus_asinus
ENSORLG00020019950	larsb	100	78.209	ENSECAG00000008963	LARS	100	79.412	Equus_caballus
ENSORLG00020019950	larsb	92	63.384	ENSEEUG00000014854	LARS	92	63.070	Erinaceus_europaeus
ENSORLG00020019950	larsb	100	85.642	ENSELUG00000023311	larsb	100	85.642	Esox_lucius
ENSORLG00020019950	larsb	99	78.332	ENSFCAG00000008715	LARS	100	79.233	Felis_catus
ENSORLG00020019950	larsb	100	78.565	ENSFALG00000003209	LARS	93	78.397	Ficedula_albicollis
ENSORLG00020019950	larsb	100	76.943	ENSFDAG00000020764	LARS	100	76.943	Fukomys_damarensis
ENSORLG00020019950	larsb	91	93.141	ENSFHEG00000010437	larsb	100	93.141	Fundulus_heteroclitus
ENSORLG00020019950	larsb	99	86.254	ENSGMOG00000013645	larsb	99	86.168	Gadus_morhua
ENSORLG00020019950	larsb	100	79.427	ENSGALG00000007494	LARS	100	79.511	Gallus_gallus
ENSORLG00020019950	larsb	100	92.230	ENSGAFG00000005029	larsb	100	92.230	Gambusia_affinis
ENSORLG00020019950	larsb	99	89.940	ENSGACG00000020720	larsb	99	89.854	Gasterosteus_aculeatus
ENSORLG00020019950	larsb	99	79.296	ENSGAGG00000002353	LARS	99	79.038	Gopherus_agassizii
ENSORLG00020019950	larsb	100	77.365	ENSGGOG00000004103	LARS	100	77.365	Gorilla_gorilla
ENSORLG00020019950	larsb	99	90.901	ENSHBUG00000003051	larsb	100	93.103	Haplochromis_burtoni
ENSORLG00020019950	larsb	100	77.196	ENSHGLG00000006937	LARS	100	77.196	Heterocephalus_glaber_female
ENSORLG00020019950	larsb	100	77.196	ENSHGLG00100002801	LARS	100	77.196	Heterocephalus_glaber_male
ENSORLG00020019950	larsb	99	90.448	ENSHCOG00000003651	larsb	100	90.448	Hippocampus_comes
ENSORLG00020019950	larsb	99	85.813	ENSIPUG00000010756	lars	100	85.579	Ictalurus_punctatus
ENSORLG00020019950	larsb	100	77.872	ENSSTOG00000002356	LARS	100	77.872	Ictidomys_tridecemlineatus
ENSORLG00020019950	larsb	100	76.605	ENSJJAG00000015265	Lars	100	76.605	Jaculus_jaculus
ENSORLG00020019950	larsb	100	92.996	ENSKMAG00000009903	larsb	100	93.080	Kryptolebias_marmoratus
ENSORLG00020019950	larsb	100	91.814	ENSLBEG00000025237	larsb	100	91.814	Labrus_bergylta
ENSORLG00020019950	larsb	100	78.451	ENSLACG00000009321	LARS	100	78.788	Latimeria_chalumnae
ENSORLG00020019950	larsb	99	82.860	ENSLOCG00000010442	larsb	99	82.687	Lepisosteus_oculatus
ENSORLG00020019950	larsb	99	77.768	ENSLAFG00000000318	LARS	100	77.411	Loxodonta_africana
ENSORLG00020019950	larsb	100	77.449	ENSMFAG00000038685	LARS	100	77.449	Macaca_fascicularis
ENSORLG00020019950	larsb	100	77.449	ENSMMUG00000029787	LARS	100	77.449	Macaca_mulatta
ENSORLG00020019950	larsb	99	75.838	ENSMNEG00000044014	LARS	99	75.838	Macaca_nemestrina
ENSORLG00020019950	larsb	99	77.816	ENSMLEG00000037563	LARS	99	77.816	Mandrillus_leucophaeus
ENSORLG00020019950	larsb	100	93.159	ENSMAMG00000021385	larsb	100	93.159	Mastacembelus_armatus
ENSORLG00020019950	larsb	100	92.399	ENSMZEG00005002662	larsb	100	92.399	Maylandia_zebra
ENSORLG00020019950	larsb	98	80.722	ENSMGAG00000009388	LARS	100	80.810	Meleagris_gallopavo
ENSORLG00020019950	larsb	99	67.412	ENSMAUG00000003063	Lars	93	78.448	Mesocricetus_auratus
ENSORLG00020019950	larsb	100	64.611	ENSMICG00000035435	-	100	64.611	Microcebus_murinus
ENSORLG00020019950	larsb	100	78.041	ENSMICG00000035589	-	100	78.041	Microcebus_murinus
ENSORLG00020019950	larsb	100	76.287	ENSMOCG00000002092	Lars	100	76.287	Microtus_ochrogaster
ENSORLG00020019950	larsb	100	88.617	ENSMMOG00000013802	larsb	100	88.364	Mola_mola
ENSORLG00020019950	larsb	99	72.751	ENSMODG00000010231	LARS	99	72.751	Monodelphis_domestica
ENSORLG00020019950	larsb	99	90.000	ENSMALG00000018444	larsb	99	90.000	Monopterus_albus
ENSORLG00020019950	larsb	100	76.371	MGP_CAROLIEiJ_G0022225	Lars	100	76.371	Mus_caroli
ENSORLG00020019950	larsb	100	76.034	ENSMUSG00000024493	Lars	100	76.034	Mus_musculus
ENSORLG00020019950	larsb	100	76.034	MGP_PahariEiJ_G0018958	Lars	100	76.034	Mus_pahari
ENSORLG00020019950	larsb	100	76.371	MGP_SPRETEiJ_G0023135	Lars	100	76.371	Mus_spretus
ENSORLG00020019950	larsb	100	78.125	ENSMPUG00000007844	LARS	100	78.125	Mustela_putorius_furo
ENSORLG00020019950	larsb	99	77.663	ENSMLUG00000001125	LARS	100	77.346	Myotis_lucifugus
ENSORLG00020019950	larsb	100	76.267	ENSNGAG00000011596	Lars	100	76.267	Nannospalax_galili
ENSORLG00020019950	larsb	100	92.736	ENSNBRG00000005764	larsb	100	92.736	Neolamprologus_brichardi
ENSORLG00020019950	larsb	99	77.386	ENSNLEG00000009816	LARS	99	77.386	Nomascus_leucogenys
ENSORLG00020019950	larsb	53	80.180	ENSMEUG00000002332	-	60	74.216	Notamacropus_eugenii
ENSORLG00020019950	larsb	79	81.720	ENSOPRG00000003076	LARS	83	81.720	Ochotona_princeps
ENSORLG00020019950	larsb	99	75.666	ENSODEG00000004882	LARS	100	75.381	Octodon_degus
ENSORLG00020019950	larsb	100	92.990	ENSONIG00000008493	larsb	100	92.990	Oreochromis_niloticus
ENSORLG00020019950	larsb	100	75.798	ENSOANG00000005755	LARS	100	75.798	Ornithorhynchus_anatinus
ENSORLG00020019950	larsb	100	78.378	ENSOCUG00000015684	LARS	100	78.378	Oryctolagus_cuniculus
ENSORLG00020019950	larsb	100	99.662	ENSORLG00000001622	larsb	100	99.662	Oryzias_latipes
ENSORLG00020019950	larsb	100	99.747	ENSORLG00015003895	larsb	100	99.747	Oryzias_latipes_hsok
ENSORLG00020019950	larsb	100	97.382	ENSOMEG00000005677	larsb	100	97.382	Oryzias_melastigma
ENSORLG00020019950	larsb	98	76.115	ENSOGAG00000008750	LARS	100	76.115	Otolemur_garnettii
ENSORLG00020019950	larsb	100	77.449	ENSOARG00000015911	-	99	77.449	Ovis_aries
ENSORLG00020019950	larsb	99	77.835	ENSOARG00000002454	-	100	77.515	Ovis_aries
ENSORLG00020019950	larsb	99	77.730	ENSPPAG00000027964	LARS	99	77.730	Pan_paniscus
ENSORLG00020019950	larsb	100	78.125	ENSPPRG00000023492	LARS	100	78.125	Panthera_pardus
ENSORLG00020019950	larsb	100	77.956	ENSPTIG00000013110	LARS	100	77.956	Panthera_tigris_altaica
ENSORLG00020019950	larsb	100	77.280	ENSPTRG00000017372	LARS	100	77.280	Pan_troglodytes
ENSORLG00020019950	larsb	100	77.280	ENSPANG00000002663	LARS	100	77.280	Papio_anubis
ENSORLG00020019950	larsb	98	84.183	ENSPKIG00000006650	larsb	99	81.523	Paramormyrops_kingsleyae
ENSORLG00020019950	larsb	99	79.639	ENSPSIG00000015641	LARS	100	79.036	Pelodiscus_sinensis
ENSORLG00020019950	larsb	69	92.125	ENSPMGG00000019556	LARS	100	92.125	Periophthalmus_magnuspinnatus
ENSORLG00020019950	larsb	100	72.743	ENSPEMG00000010933	Lars	100	72.743	Peromyscus_maniculatus_bairdii
ENSORLG00020019950	larsb	51	60.661	ENSPMAG00000005301	larsb	99	60.661	Petromyzon_marinus
ENSORLG00020019950	larsb	100	76.436	ENSPCIG00000030572	LARS	100	76.436	Phascolarctos_cinereus
ENSORLG00020019950	larsb	100	92.990	ENSPFOG00000002361	larsb	100	92.990	Poecilia_formosa
ENSORLG00020019950	larsb	100	92.905	ENSPLAG00000016550	larsb	100	92.905	Poecilia_latipinna
ENSORLG00020019950	larsb	100	92.821	ENSPMEG00000018422	larsb	100	92.821	Poecilia_mexicana
ENSORLG00020019950	larsb	100	92.145	ENSPREG00000005668	larsb	100	92.145	Poecilia_reticulata
ENSORLG00020019950	larsb	99	76.055	ENSPPYG00000015908	LARS	97	75.719	Pongo_abelii
ENSORLG00020019950	larsb	94	61.759	ENSPCAG00000005621	LARS	100	60.682	Procavia_capensis
ENSORLG00020019950	larsb	100	76.858	ENSPCOG00000019325	LARS	100	76.858	Propithecus_coquereli
ENSORLG00020019950	larsb	97	68.186	ENSPVAG00000011237	LARS	100	70.423	Pteropus_vampyrus
ENSORLG00020019950	larsb	100	92.399	ENSPNYG00000015254	larsb	100	92.399	Pundamilia_nyererei
ENSORLG00020019950	larsb	100	85.811	ENSPNAG00000027191	larsb	100	85.811	Pygocentrus_nattereri
ENSORLG00020019950	larsb	100	76.034	ENSRNOG00000018304	Lars	100	76.034	Rattus_norvegicus
ENSORLG00020019950	larsb	94	76.438	ENSRBIG00000043198	LARS	99	76.438	Rhinopithecus_bieti
ENSORLG00020019950	larsb	90	45.826	YPL160W	CDC60	99	45.389	Saccharomyces_cerevisiae
ENSORLG00020019950	larsb	99	75.494	ENSSBOG00000026661	LARS	100	78.552	Saimiri_boliviensis_boliviensis
ENSORLG00020019950	larsb	100	77.806	ENSSHAG00000006084	LARS	100	77.806	Sarcophilus_harrisii
ENSORLG00020019950	larsb	97	84.790	ENSSFOG00015018117	larsb	90	84.790	Scleropages_formosus
ENSORLG00020019950	larsb	88	93.001	ENSSMAG00000004078	larsb	97	92.905	Scophthalmus_maximus
ENSORLG00020019950	larsb	100	93.750	ENSSDUG00000021142	larsb	100	93.750	Seriola_dumerili
ENSORLG00020019950	larsb	100	93.919	ENSSLDG00000007054	larsb	100	93.919	Seriola_lalandi_dorsalis
ENSORLG00020019950	larsb	85	70.000	ENSSARG00000013481	LARS	83	75.862	Sorex_araneus
ENSORLG00020019950	larsb	100	78.921	ENSSPUG00000013805	LARS	100	78.668	Sphenodon_punctatus
ENSORLG00020019950	larsb	100	94.595	ENSSPAG00000012124	larsb	100	94.595	Stegastes_partitus
ENSORLG00020019950	larsb	100	74.662	ENSSSCG00000014411	LARS	100	74.662	Sus_scrofa
ENSORLG00020019950	larsb	99	79.038	ENSTGUG00000000092	-	99	78.866	Taeniopygia_guttata
ENSORLG00020019950	larsb	100	89.274	ENSTRUG00000005358	larsb	100	89.274	Takifugu_rubripes
ENSORLG00020019950	larsb	99	85.909	ENSTNIG00000018214	larsb	100	85.450	Tetraodon_nigroviridis
ENSORLG00020019950	larsb	92	76.423	ENSTBEG00000003757	LARS	94	76.423	Tupaia_belangeri
ENSORLG00020019950	larsb	97	75.661	ENSTTRG00000016712	LARS	96	75.661	Tursiops_truncatus
ENSORLG00020019950	larsb	94	79.269	ENSUAMG00000019907	LARS	99	78.853	Ursus_americanus
ENSORLG00020019950	larsb	100	78.041	ENSUMAG00000010585	LARS	100	78.041	Ursus_maritimus
ENSORLG00020019950	larsb	92	77.685	ENSVPAG00000000557	LARS	92	77.685	Vicugna_pacos
ENSORLG00020019950	larsb	100	78.378	ENSVVUG00000021124	LARS	100	78.378	Vulpes_vulpes
ENSORLG00020019950	larsb	99	80.584	ENSXETG00000002320	lars	99	80.412	Xenopus_tropicalis
ENSORLG00020019950	larsb	100	92.145	ENSXMAG00000001454	larsb	100	92.145	Xiphophorus_maculatus