EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020020094 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 7154 bases
Position: chr4:26773374-26780527
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020033834	zf-C2H2	PF00096.26	8.7e-15	1	3
ENSORLP00020033834	zf-C2H2	PF00096.26	8.7e-15	2	3
ENSORLP00020033834	zf-C2H2	PF00096.26	8.7e-15	3	3
ENSORLP00020019037	zf-C2H2	PF00096.26	3.2e-09	1	1
ENSORLP00020033850	zf-C2H2	PF00096.26	3.6e-07	1	1
ENSORLP00020019049	zf-C2H2	PF00096.26	1.6e-06	1	1
ENSORLP00020033834	zf-met	PF12874.7	1.2e-08	1	1
ENSORLP00020019049	zf-met	PF12874.7	4.9e-06	1	1
ENSORLP00020019037	zf-met	PF12874.7	5.6e-06	1	1
ENSORLP00020033850	zf-met	PF12874.7	7.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020028084	-	1341	-	ENSORLP00020033834	446 (aa)	-	-
ENSORLT00020028068	-	1377	-	ENSORLP00020033850	458 (aa)	-	-
ENSORLT00020035003	-	1251	-	ENSORLP00020019037	416 (aa)	-	-
ENSORLT00020028062	-	1284	-	ENSORLP00020019049	427 (aa)	-	-

Gene Model

Click here to download ENSORLG00020020094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020020094's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020020094	-	56	46.939	ENSORLG00020017164	-	99	39.535
ENSORLG00020020094	-	59	31.313	ENSORLG00020009554	-	70	32.000
ENSORLG00020020094	-	65	39.286	ENSORLG00020008891	-	63	39.286
ENSORLG00020020094	-	56	40.244	ENSORLG00020010171	-	94	31.959
ENSORLG00020020094	-	58	34.375	ENSORLG00020016037	-	93	30.526
ENSORLG00020020094	-	54	38.095	ENSORLG00020011149	-	85	33.333
ENSORLG00020020094	-	54	33.010	ENSORLG00020002128	-	86	38.554
ENSORLG00020020094	-	58	41.379	ENSORLG00020010560	-	91	33.766
ENSORLG00020020094	-	58	40.476	ENSORLG00020010804	-	86	40.299
ENSORLG00020020094	-	57	35.294	ENSORLG00020018051	prdm5	67	35.294
ENSORLG00020020094	-	55	34.409	ENSORLG00020018069	-	90	34.409
ENSORLG00020020094	-	58	38.636	ENSORLG00020007018	-	79	38.043
ENSORLG00020020094	-	56	38.095	ENSORLG00020009857	-	95	39.024
ENSORLG00020020094	-	50	32.530	ENSORLG00020017850	-	76	37.805
ENSORLG00020020094	-	51	43.333	ENSORLG00020016754	-	87	36.792
ENSORLG00020020094	-	62	30.070	ENSORLG00020020419	-	75	35.294
ENSORLG00020020094	-	76	40.217	ENSORLG00020000219	-	70	40.217
ENSORLG00020020094	-	78	30.851	ENSORLG00020011234	-	75	37.805
ENSORLG00020020094	-	64	34.444	ENSORLG00020009419	-	85	33.621
ENSORLG00020020094	-	59	39.024	ENSORLG00020010250	-	80	37.209
ENSORLG00020020094	-	58	32.540	ENSORLG00020002765	zbtb34	51	32.540

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020020094	-	96	79.570	ENSELUG00000008519	zbtb11	52	39.024	Esox_lucius
ENSORLG00020020094	-	95	79.570	ENSIPUG00000009604	zbtb11	50	79.570	Ictalurus_punctatus
ENSORLG00020020094	-	98	78.261	ENSLOCG00000009538	zbtb11	63	78.261	Lepisosteus_oculatus
ENSORLG00020020094	-	98	96.575	ENSORLG00000015676	zbtb11	62	94.624	Oryzias_latipes
ENSORLG00020020094	-	98	95.890	ENSORLG00015015883	zbtb11	64	94.624	Oryzias_latipes_hsok
ENSORLG00020020094	-	66	69.697	ENSPTRG00000043270	-	56	39.095	Pan_troglodytes
ENSORLG00020020094	-	98	69.565	ENSPVAG00000009887	ZBTB11	53	40.741	Pteropus_vampyrus
ENSORLG00020020094	-	98	77.419	ENSPNAG00000027087	zbtb11	51	77.419	Pygocentrus_nattereri
ENSORLG00020020094	-	98	69.892	ENSSPUG00000018482	ZBTB11	72	69.892	Sphenodon_punctatus