EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020020207 (Gene tree)
Gene ID: -
Gene Symbol: RNPS1
Alias: -
Full Name: RNA binding protein with serine rich domain 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 1509 bases
Position: chr8:10593712-10595220
Accession: 10080
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020033975	RRM_1	PF00076.22	9.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020035077	RNPS1-201	822	-	ENSORLP00020033975	273 (aa)	-	-

Gene Model

Click here to download ENSORLG00020020207's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020020207's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020020207	RNPS1	82	73.362	ENSAPOG00000017310	RNPS1	74	75.983	Acanthochromis_polyacanthus
ENSORLG00020020207	RNPS1	75	69.524	ENSACIG00000014367	-	77	79.343	Amphilophus_citrinellus
ENSORLG00020020207	RNPS1	82	71.304	ENSAOCG00000002404	RNPS1	82	75.217	Amphiprion_ocellaris
ENSORLG00020020207	RNPS1	82	71.429	ENSAPEG00000006497	RNPS1	80	75.325	Amphiprion_percula
ENSORLG00020020207	RNPS1	82	72.174	ENSATEG00000024267	RNPS1	82	73.913	Anabas_testudineus
ENSORLG00020020207	RNPS1	82	73.684	ENSACLG00000025942	RNPS1	82	75.439	Astatotilapia_calliptera
ENSORLG00020020207	RNPS1	82	69.432	ENSACLG00000021537	-	87	69.432	Astatotilapia_calliptera
ENSORLG00020020207	RNPS1	93	60.000	ENSCATG00000042361	-	53	77.064	Cercocebus_atys
ENSORLG00020020207	RNPS1	82	68.398	ENSCSEG00000015997	RNPS1	81	71.429	Cynoglossus_semilaevis
ENSORLG00020020207	RNPS1	82	75.546	ENSCSEG00000000402	RNPS1	76	74.672	Cynoglossus_semilaevis
ENSORLG00020020207	RNPS1	76	72.300	ENSCVAG00000010868	RNPS1	76	77.103	Cyprinodon_variegatus
ENSORLG00020020207	RNPS1	75	71.362	ENSFHEG00000011705	RNPS1	77	72.558	Fundulus_heteroclitus
ENSORLG00020020207	RNPS1	75	69.811	ENSGAFG00000005457	RNPS1	76	71.495	Gambusia_affinis
ENSORLG00020020207	RNPS1	82	71.429	ENSGACG00000011261	RNPS1	82	76.190	Gasterosteus_aculeatus
ENSORLG00020020207	RNPS1	82	73.246	ENSHBUG00000002494	RNPS1	82	75.000	Haplochromis_burtoni
ENSORLG00020020207	RNPS1	82	69.432	ENSHBUG00000017337	-	82	69.432	Haplochromis_burtoni
ENSORLG00020020207	RNPS1	82	67.234	ENSHCOG00000004424	RNPS1	82	69.787	Hippocampus_comes
ENSORLG00020020207	RNPS1	82	73.799	ENSKMAG00000009135	RNPS1	82	75.983	Kryptolebias_marmoratus
ENSORLG00020020207	RNPS1	67	75.543	ENSLBEG00000024091	RNPS1	77	71.090	Labrus_bergylta
ENSORLG00020020207	RNPS1	84	63.485	ENSMFAG00000044121	-	84	60.426	Macaca_fascicularis
ENSORLG00020020207	RNPS1	82	71.304	ENSMAMG00000021609	-	82	73.043	Mastacembelus_armatus
ENSORLG00020020207	RNPS1	82	75.983	ENSMAMG00000021148	-	81	69.298	Mastacembelus_armatus
ENSORLG00020020207	RNPS1	82	69.298	ENSMZEG00005006256	-	83	69.298	Maylandia_zebra
ENSORLG00020020207	RNPS1	82	73.684	ENSMZEG00005012742	RNPS1	82	75.439	Maylandia_zebra
ENSORLG00020020207	RNPS1	75	73.206	ENSMMOG00000010863	RNPS1	77	72.512	Mola_mola
ENSORLG00020020207	RNPS1	76	73.460	ENSNBRG00000023437	RNPS1	77	73.460	Neolamprologus_brichardi
ENSORLG00020020207	RNPS1	82	69.298	ENSNBRG00000014540	-	84	69.298	Neolamprologus_brichardi
ENSORLG00020020207	RNPS1	82	69.298	ENSONIG00000019627	-	83	69.298	Oreochromis_niloticus
ENSORLG00020020207	RNPS1	99	99.265	ENSORLG00000008033	RNPS1	99	99.265	Oryzias_latipes
ENSORLG00020020207	RNPS1	100	99.634	ENSORLG00015000305	-	100	99.634	Oryzias_latipes_hsok
ENSORLG00020020207	RNPS1	56	65.132	ENSPTIG00000015643	RNPS1	57	79.817	Panthera_tigris_altaica
ENSORLG00020020207	RNPS1	68	75.676	ENSPMGG00000015888	-	76	74.163	Periophthalmus_magnuspinnatus
ENSORLG00020020207	RNPS1	56	69.079	ENSPCIG00000016114	-	53	77.982	Phascolarctos_cinereus
ENSORLG00020020207	RNPS1	75	70.755	ENSPFOG00000009978	RNPS1	76	72.430	Poecilia_formosa
ENSORLG00020020207	RNPS1	75	70.755	ENSPLAG00000009343	RNPS1	76	72.430	Poecilia_latipinna
ENSORLG00020020207	RNPS1	76	70.892	ENSPMEG00000008552	RNPS1	76	72.430	Poecilia_mexicana
ENSORLG00020020207	RNPS1	75	70.755	ENSPREG00000001843	RNPS1	76	72.430	Poecilia_reticulata
ENSORLG00020020207	RNPS1	82	73.684	ENSPNYG00000000585	RNPS1	82	75.439	Pundamilia_nyererei
ENSORLG00020020207	RNPS1	82	70.085	ENSSFOG00015022746	RNPS1	85	65.532	Scleropages_formosus
ENSORLG00020020207	RNPS1	82	73.568	ENSSMAG00000016933	RNPS1	82	73.568	Scophthalmus_maximus
ENSORLG00020020207	RNPS1	82	69.565	ENSSDUG00000011453	RNPS1	82	71.304	Seriola_dumerili
ENSORLG00020020207	RNPS1	80	71.875	ENSSLDG00000021341	RNPS1	82	73.661	Seriola_lalandi_dorsalis
ENSORLG00020020207	RNPS1	82	68.103	ENSTRUG00000008602	RNPS1	82	69.397	Takifugu_rubripes
ENSORLG00020020207	RNPS1	82	69.099	ENSTNIG00000009753	RNPS1	81	70.386	Tetraodon_nigroviridis
ENSORLG00020020207	RNPS1	82	71.179	ENSXMAG00000004827	RNPS1	82	76.419	Xiphophorus_maculatus