EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020020238 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 3744 bases
Position: chr12:11356796-11360539
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020019249	RVT_1	PF00078.27	3.2e-45	1	1
ENSORLP00020019249	RNase_H	PF00075.24	2.4e-10	1	1
ENSORLP00020019249	Exo_endo_phos	PF03372.23	4.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020028309	-	3744	-	ENSORLP00020019249	1247 (aa)	-	-

Gene Model

Click here to download ENSORLG00020020238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020020238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020020238	-	100	99.679	ENSORLG00020011427	-	100	99.679
ENSORLG00020020238	-	100	99.679	ENSORLG00020018543	-	100	99.679
ENSORLG00020020238	-	71	99.775	ENSORLG00020019901	-	100	99.775

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020020238	-	99	44.524	ENSAMXG00000043500	-	99	44.524	Astyanax_mexicanus
ENSORLG00020020238	-	100	46.056	ENSDARG00000103037	CR848788.1	100	46.056	Danio_rerio
ENSORLG00020020238	-	100	45.261	ENSDARG00000103436	BX548028.1	99	45.261	Danio_rerio
ENSORLG00020020238	-	100	46.056	ENSDARG00000099201	BX908731.1	100	46.056	Danio_rerio
ENSORLG00020020238	-	65	47.917	ENSKMAG00000021014	-	100	47.917	Kryptolebias_marmoratus
ENSORLG00020020238	-	99	46.221	ENSKMAG00000004415	-	100	46.221	Kryptolebias_marmoratus
ENSORLG00020020238	-	99	46.221	ENSKMAG00000003982	-	100	46.221	Kryptolebias_marmoratus
ENSORLG00020020238	-	68	45.946	ENSKMAG00000012711	-	100	45.785	Kryptolebias_marmoratus
ENSORLG00020020238	-	100	98.957	ENSORLG00000024423	-	100	98.957	Oryzias_latipes
ENSORLG00020020238	-	100	97.273	ENSORLG00000026314	-	100	97.273	Oryzias_latipes
ENSORLG00020020238	-	100	97.354	ENSORLG00000023592	-	100	97.354	Oryzias_latipes
ENSORLG00020020238	-	100	97.674	ENSORLG00000027174	-	100	97.674	Oryzias_latipes
ENSORLG00020020238	-	88	97.806	ENSORLG00015013792	-	100	97.806	Oryzias_latipes_hsok
ENSORLG00020020238	-	85	48.636	ENSOMEG00000003836	-	98	48.636	Oryzias_melastigma
ENSORLG00020020238	-	97	46.160	ENSPKIG00000019189	-	96	46.160	Paramormyrops_kingsleyae
ENSORLG00020020238	-	61	40.261	ENSXMAG00000025430	-	99	40.261	Xiphophorus_maculatus
ENSORLG00020020238	-	78	45.224	ENSXMAG00000029923	-	99	44.155	Xiphophorus_maculatus
ENSORLG00020020238	-	99	47.736	ENSXMAG00000021070	-	100	47.736	Xiphophorus_maculatus
ENSORLG00020020238	-	78	45.325	ENSXMAG00000023078	-	99	44.251	Xiphophorus_maculatus
ENSORLG00020020238	-	69	45.757	ENSXMAG00000020874	-	95	45.757	Xiphophorus_maculatus
ENSORLG00020020238	-	71	44.160	ENSXMAG00000024143	-	100	44.160	Xiphophorus_maculatus
ENSORLG00020020238	-	90	46.134	ENSXMAG00000026588	-	99	46.134	Xiphophorus_maculatus
ENSORLG00020020238	-	99	46.454	ENSXMAG00000021061	-	100	46.576	Xiphophorus_maculatus
ENSORLG00020020238	-	82	44.251	ENSXMAG00000027130	-	99	44.444	Xiphophorus_maculatus
ENSORLG00020020238	-	99	47.498	ENSXMAG00000028309	-	100	47.498	Xiphophorus_maculatus
ENSORLG00020020238	-	90	46.134	ENSXMAG00000026248	-	99	46.134	Xiphophorus_maculatus
ENSORLG00020020238	-	99	47.736	ENSXMAG00000021755	-	100	47.736	Xiphophorus_maculatus
ENSORLG00020020238	-	90	46.134	ENSXMAG00000022223	-	99	46.134	Xiphophorus_maculatus
ENSORLG00020020238	-	92	43.594	ENSXMAG00000029466	-	99	43.594	Xiphophorus_maculatus
ENSORLG00020020238	-	63	46.338	ENSXMAG00000023377	-	100	46.338	Xiphophorus_maculatus
ENSORLG00020020238	-	64	46.040	ENSXMAG00000023126	-	100	46.040	Xiphophorus_maculatus