EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020020277 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-34d22.5
Alias: -
Full Name: si:dkey-34d22.5
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 5412 bases
Position: chr16:21463629-21469040
Accession: ZDB-GENE-131121-578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020019284	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020028368	-	4681	-	ENSORLP00020019284	217 (aa)	-	-

Gene Model

Click here to download ENSORLG00020020277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020020277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020020277	si:dkey-34d22.5	96	36.667	ENSORLG00020013337	rab6bb	94	36.667
ENSORLG00020020277	si:dkey-34d22.5	85	36.126	ENSORLG00020019465	si:dkey-13a21.4	92	36.126
ENSORLG00020020277	si:dkey-34d22.5	71	40.645	ENSORLG00020020220	rab23	74	40.260
ENSORLG00020020277	si:dkey-34d22.5	78	33.333	ENSORLG00020016139	rab34b	63	33.333
ENSORLG00020020277	si:dkey-34d22.5	70	31.169	ENSORLG00020012306	si:ch73-116o1.2	79	31.325
ENSORLG00020020277	si:dkey-34d22.5	90	39.713	ENSORLG00020010772	rab6ba	94	39.713
ENSORLG00020020277	si:dkey-34d22.5	72	31.481	ENSORLG00020006790	dnajc27	59	31.481
ENSORLG00020020277	si:dkey-34d22.5	98	31.818	ENSORLG00020020816	rab11ba	96	31.818
ENSORLG00020020277	si:dkey-34d22.5	75	31.928	ENSORLG00020005258	rerg	82	31.928
ENSORLG00020020277	si:dkey-34d22.5	76	42.012	ENSORLG00020015717	-	68	42.012
ENSORLG00020020277	si:dkey-34d22.5	77	40.462	ENSORLG00020008512	-	86	40.462
ENSORLG00020020277	si:dkey-34d22.5	80	38.378	ENSORLG00020009158	rab9b	88	38.378
ENSORLG00020020277	si:dkey-34d22.5	78	35.632	ENSORLG00020010041	rab34a	65	35.632
ENSORLG00020020277	si:dkey-34d22.5	71	32.903	ENSORLG00020008129	hras	88	32.143
ENSORLG00020020277	si:dkey-34d22.5	86	55.851	ENSORLG00020019269	RAB39B	88	55.851
ENSORLG00020020277	si:dkey-34d22.5	71	32.258	ENSORLG00020010114	-	83	32.258
ENSORLG00020020277	si:dkey-34d22.5	77	38.824	ENSORLG00020000867	si:dkey-16l2.16	80	38.824
ENSORLG00020020277	si:dkey-34d22.5	97	38.967	ENSORLG00020020035	rab2a	99	38.967
ENSORLG00020020277	si:dkey-34d22.5	91	33.005	ENSORLG00020005952	rab7a	93	33.005
ENSORLG00020020277	si:dkey-34d22.5	67	41.830	ENSORLG00020013870	-	69	40.120
ENSORLG00020020277	si:dkey-34d22.5	71	32.903	ENSORLG00020002801	rheb	83	32.903
ENSORLG00020020277	si:dkey-34d22.5	74	42.771	ENSORLG00020000483	rab9a	82	42.771
ENSORLG00020020277	si:dkey-34d22.5	75	36.585	ENSORLG00020020922	rab5aa	75	36.585
ENSORLG00020020277	si:dkey-34d22.5	75	41.818	ENSORLG00020015288	rab30	80	41.818
ENSORLG00020020277	si:dkey-34d22.5	98	33.645	ENSORLG00020013747	rab11al	96	33.645
ENSORLG00020020277	si:dkey-34d22.5	82	35.519	ENSORLG00020005240	RAB29	90	35.519
ENSORLG00020020277	si:dkey-34d22.5	88	43.299	ENSORLG00020018986	rab14	89	39.691
ENSORLG00020020277	si:dkey-34d22.5	77	42.012	ENSORLG00020009535	-	84	42.012
ENSORLG00020020277	si:dkey-34d22.5	76	44.578	ENSORLG00020004905	RAB15	79	44.578
ENSORLG00020020277	si:dkey-34d22.5	71	35.256	ENSORLG00020005150	rhebl1	84	35.256
ENSORLG00020020277	si:dkey-34d22.5	75	43.902	ENSORLG00020011590	rab18b	80	43.902
ENSORLG00020020277	si:dkey-34d22.5	80	36.364	ENSORLG00020013719	rab25b	86	37.059
ENSORLG00020020277	si:dkey-34d22.5	81	38.798	ENSORLG00020020266	rab33a	66	38.798
ENSORLG00020020277	si:dkey-34d22.5	97	56.808	ENSORLG00020013895	rab42a	98	56.808
ENSORLG00020020277	si:dkey-34d22.5	97	36.744	ENSORLG00020021071	zgc:171927	98	36.744
ENSORLG00020020277	si:dkey-34d22.5	81	40.884	ENSORLG00020021697	-	89	40.884
ENSORLG00020020277	si:dkey-34d22.5	69	33.333	ENSORLG00020013690	zgc:55558	87	32.515
ENSORLG00020020277	si:dkey-34d22.5	67	40.541	ENSORLG00020012685	zgc:101559	63	40.541
ENSORLG00020020277	si:dkey-34d22.5	75	43.902	ENSORLG00020008333	rab18a	80	43.902
ENSORLG00020020277	si:dkey-34d22.5	76	41.071	ENSORLG00020001816	rab6a	82	41.071
ENSORLG00020020277	si:dkey-34d22.5	72	40.881	ENSORLG00020005131	rab12	83	34.906
ENSORLG00020020277	si:dkey-34d22.5	74	46.626	ENSORLG00020018259	rab15	76	46.626
ENSORLG00020020277	si:dkey-34d22.5	76	31.548	ENSORLG00020019402	rasd4	79	31.548
ENSORLG00020020277	si:dkey-34d22.5	74	41.718	ENSORLG00020021663	rab3db	73	41.718
ENSORLG00020020277	si:dkey-34d22.5	75	32.716	ENSORLG00020001721	rabl2	70	32.716
ENSORLG00020020277	si:dkey-34d22.5	86	35.859	ENSORLG00020008388	rab5c	87	35.859
ENSORLG00020020277	si:dkey-34d22.5	98	31.818	ENSORLG00020019393	rab11bb	96	31.818
ENSORLG00020020277	si:dkey-34d22.5	80	36.364	ENSORLG00020020811	rab25a	57	36.364
ENSORLG00020020277	si:dkey-34d22.5	67	39.189	ENSORLG00020018196	rab33ba	63	39.189
ENSORLG00020020277	si:dkey-34d22.5	76	41.916	ENSORLG00020000892	rab1ab	82	41.916
ENSORLG00020020277	si:dkey-34d22.5	76	41.071	ENSORLG00020000604	rab41	77	41.071
ENSORLG00020020277	si:dkey-34d22.5	71	32.692	ENSORLG00020020961	kras	94	31.953
ENSORLG00020020277	si:dkey-34d22.5	50	40.541	ENSORLG00020011620	rras2	64	40.541
ENSORLG00020020277	si:dkey-34d22.5	88	32.843	ENSORLG00020018922	rasl11a	78	32.843
ENSORLG00020020277	si:dkey-34d22.5	94	32.394	ENSORLG00020020844	RAB11B	97	32.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020020277	si:dkey-34d22.5	99	84.163	ENSACIG00000016958	si:dkey-34d22.5	99	84.163	Amphilophus_citrinellus
ENSORLG00020020277	si:dkey-34d22.5	99	87.330	ENSATEG00000010784	si:dkey-34d22.5	86	87.330	Anabas_testudineus
ENSORLG00020020277	si:dkey-34d22.5	99	59.633	ENSCPBG00000011236	-	99	59.633	Chrysemys_picta_bellii
ENSORLG00020020277	si:dkey-34d22.5	99	79.638	ENSCSEG00000019183	si:dkey-34d22.5	99	79.638	Cynoglossus_semilaevis
ENSORLG00020020277	si:dkey-34d22.5	99	83.258	ENSCVAG00000017064	si:dkey-34d22.5	99	83.258	Cyprinodon_variegatus
ENSORLG00020020277	si:dkey-34d22.5	83	52.198	ENSDARG00000100379	si:dkey-34d22.2	99	52.198	Danio_rerio
ENSORLG00020020277	si:dkey-34d22.5	97	59.906	ENSFALG00000001373	-	97	59.906	Ficedula_albicollis
ENSORLG00020020277	si:dkey-34d22.5	99	84.685	ENSFHEG00000012041	si:dkey-34d22.5	99	84.685	Fundulus_heteroclitus
ENSORLG00020020277	si:dkey-34d22.5	87	63.158	ENSGALG00000000994	-	90	63.158	Gallus_gallus
ENSORLG00020020277	si:dkey-34d22.5	99	85.068	ENSGAFG00000008183	si:dkey-34d22.5	99	85.068	Gambusia_affinis
ENSORLG00020020277	si:dkey-34d22.5	94	58.537	ENSGAGG00000004918	-	99	58.537	Gopherus_agassizii
ENSORLG00020020277	si:dkey-34d22.5	100	73.756	ENSHCOG00000015692	si:dkey-34d22.5	100	73.756	Hippocampus_comes
ENSORLG00020020277	si:dkey-34d22.5	99	86.878	ENSKMAG00000012778	si:dkey-34d22.5	99	86.878	Kryptolebias_marmoratus
ENSORLG00020020277	si:dkey-34d22.5	99	82.353	ENSLBEG00000002926	si:dkey-34d22.5	100	82.353	Labrus_bergylta
ENSORLG00020020277	si:dkey-34d22.5	98	59.535	ENSLACG00000012674	si:dkey-34d22.5	99	59.535	Latimeria_chalumnae
ENSORLG00020020277	si:dkey-34d22.5	98	68.372	ENSLOCG00000003467	si:dkey-34d22.5	98	71.163	Lepisosteus_oculatus
ENSORLG00020020277	si:dkey-34d22.5	99	83.636	ENSMMOG00000006846	si:dkey-34d22.5	99	83.636	Mola_mola
ENSORLG00020020277	si:dkey-34d22.5	99	81.900	ENSMALG00000013152	si:dkey-34d22.5	99	81.900	Monopterus_albus
ENSORLG00020020277	si:dkey-34d22.5	100	99.539	ENSORLG00000014099	si:dkey-34d22.5	100	99.539	Oryzias_latipes
ENSORLG00020020277	si:dkey-34d22.5	100	99.078	ENSORLG00015000142	si:dkey-34d22.5	100	99.078	Oryzias_latipes_hsok
ENSORLG00020020277	si:dkey-34d22.5	100	94.118	ENSOMEG00000017958	si:dkey-34d22.5	100	94.118	Oryzias_melastigma
ENSORLG00020020277	si:dkey-34d22.5	99	76.256	ENSPKIG00000021209	si:dkey-34d22.5	100	76.256	Paramormyrops_kingsleyae
ENSORLG00020020277	si:dkey-34d22.5	91	62.814	ENSPSIG00000006606	-	99	62.814	Pelodiscus_sinensis
ENSORLG00020020277	si:dkey-34d22.5	99	83.636	ENSPMGG00000001298	-	99	83.636	Periophthalmus_magnuspinnatus
ENSORLG00020020277	si:dkey-34d22.5	93	60.099	ENSPCIG00000022399	-	91	60.099	Phascolarctos_cinereus
ENSORLG00020020277	si:dkey-34d22.5	99	85.520	ENSPFOG00000014499	si:dkey-34d22.5	99	85.520	Poecilia_formosa
ENSORLG00020020277	si:dkey-34d22.5	99	85.520	ENSPLAG00000007773	si:dkey-34d22.5	99	85.520	Poecilia_latipinna
ENSORLG00020020277	si:dkey-34d22.5	99	85.520	ENSPMEG00000012932	si:dkey-34d22.5	99	85.520	Poecilia_mexicana
ENSORLG00020020277	si:dkey-34d22.5	89	60.513	ENSSHAG00000008520	-	88	60.513	Sarcophilus_harrisii
ENSORLG00020020277	si:dkey-34d22.5	99	70.183	ENSSFOG00015012088	rab42	98	70.183	Scleropages_formosus
ENSORLG00020020277	si:dkey-34d22.5	99	90.000	ENSSLDG00000002646	si:dkey-34d22.5	99	90.000	Seriola_lalandi_dorsalis
ENSORLG00020020277	si:dkey-34d22.5	100	89.640	ENSSPAG00000012955	si:dkey-34d22.5	100	89.640	Stegastes_partitus
ENSORLG00020020277	si:dkey-34d22.5	92	48.756	ENSXETG00000020622	rab39a	98	48.756	Xenopus_tropicalis
ENSORLG00020020277	si:dkey-34d22.5	99	84.163	ENSXCOG00000008410	si:dkey-34d22.5	99	84.163	Xiphophorus_couchianus
ENSORLG00020020277	si:dkey-34d22.5	99	84.163	ENSXMAG00000029317	si:dkey-34d22.5	99	84.163	Xiphophorus_maculatus