EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020020289 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162730
Alias: -
Full Name: zgc:162730
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5284 bases
Position: chr13:16668187-16673470
Accession: ZDB-GENE-030131-6366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020034009	zf-CCCH	PF00642.24	3.1e-20	1	2
ENSORLP00020034009	zf-CCCH	PF00642.24	3.1e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020028356	-	3834	-	ENSORLP00020034009	412 (aa)	-	-

Gene Model

Click here to download ENSORLG00020020289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020020289's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020020289	zgc:162730	100	67.136	ENSAPOG00000014920	zgc:162730	99	65.493	Acanthochromis_polyacanthus
ENSORLG00020020289	zgc:162730	58	59.414	ENSACIG00000017366	zgc:162730	97	57.322	Amphilophus_citrinellus
ENSORLG00020020289	zgc:162730	100	66.197	ENSAOCG00000002001	zgc:162730	99	65.258	Amphiprion_ocellaris
ENSORLG00020020289	zgc:162730	87	67.655	ENSAPEG00000015490	zgc:162730	99	65.099	Amphiprion_percula
ENSORLG00020020289	zgc:162730	100	61.215	ENSATEG00000008790	zgc:162730	99	60.280	Anabas_testudineus
ENSORLG00020020289	zgc:162730	100	60.706	ENSACLG00000022112	zgc:162730	99	61.176	Astatotilapia_calliptera
ENSORLG00020020289	zgc:162730	83	44.282	ENSAMXG00000035945	zgc:162730	84	44.575	Astyanax_mexicanus
ENSORLG00020020289	zgc:162730	99	59.479	ENSCSEG00000018283	zgc:162730	99	54.217	Cynoglossus_semilaevis
ENSORLG00020020289	zgc:162730	100	61.995	ENSCVAG00000018571	zgc:162730	99	60.095	Cyprinodon_variegatus
ENSORLG00020020289	zgc:162730	80	45.946	ENSDARG00000103720	zgc:162730	88	46.286	Danio_rerio
ENSORLG00020020289	zgc:162730	68	35.395	ENSDARG00000040725	zgc:114130	57	36.293	Danio_rerio
ENSORLG00020020289	zgc:162730	100	47.630	ENSELUG00000013158	zgc:162730	99	47.170	Esox_lucius
ENSORLG00020020289	zgc:162730	68	37.063	ENSELUG00000013151	zgc:114130	56	38.039	Esox_lucius
ENSORLG00020020289	zgc:162730	99	63.158	ENSFHEG00000013710	zgc:162730	99	61.244	Fundulus_heteroclitus
ENSORLG00020020289	zgc:162730	79	60.241	ENSGMOG00000017242	zgc:162730	99	59.036	Gadus_morhua
ENSORLG00020020289	zgc:162730	100	63.121	ENSGAFG00000009953	zgc:162730	99	61.229	Gambusia_affinis
ENSORLG00020020289	zgc:162730	79	62.575	ENSGACG00000008351	zgc:162730	99	59.760	Gasterosteus_aculeatus
ENSORLG00020020289	zgc:162730	100	60.706	ENSHBUG00000015057	zgc:162730	99	61.176	Haplochromis_burtoni
ENSORLG00020020289	zgc:162730	100	60.557	ENSHCOG00000015801	zgc:162730	99	58.933	Hippocampus_comes
ENSORLG00020020289	zgc:162730	99	39.568	ENSIPUG00000018248	zgc:162730	84	43.103	Ictalurus_punctatus
ENSORLG00020020289	zgc:162730	100	62.911	ENSKMAG00000019277	zgc:162730	99	62.441	Kryptolebias_marmoratus
ENSORLG00020020289	zgc:162730	100	58.933	ENSLBEG00000018380	zgc:162730	99	57.077	Labrus_bergylta
ENSORLG00020020289	zgc:162730	99	35.945	ENSLACG00000015732	sb:cb81	59	36.538	Latimeria_chalumnae
ENSORLG00020020289	zgc:162730	99	38.028	ENSLOCG00000014587	sb:cb81	61	42.146	Lepisosteus_oculatus
ENSORLG00020020289	zgc:162730	79	45.401	ENSLOCG00000014597	zgc:162730	79	46.884	Lepisosteus_oculatus
ENSORLG00020020289	zgc:162730	65	38.376	ENSLOCG00000013957	zfp36l1a	61	39.051	Lepisosteus_oculatus
ENSORLG00020020289	zgc:162730	68	36.789	ENSMAMG00000007511	zgc:114130	58	38.403	Mastacembelus_armatus
ENSORLG00020020289	zgc:162730	100	61.072	ENSMAMG00000007516	zgc:162730	98	60.606	Mastacembelus_armatus
ENSORLG00020020289	zgc:162730	100	56.174	ENSMZEG00005014415	zgc:162730	97	57.851	Maylandia_zebra
ENSORLG00020020289	zgc:162730	59	62.753	ENSMMOG00000011506	zgc:162730	99	59.036	Mola_mola
ENSORLG00020020289	zgc:162730	100	59.535	ENSMALG00000002348	zgc:162730	99	58.372	Monopterus_albus
ENSORLG00020020289	zgc:162730	100	60.706	ENSNBRG00000013701	zgc:162730	99	61.176	Neolamprologus_brichardi
ENSORLG00020020289	zgc:162730	83	57.971	ENSONIG00000005003	zgc:162730	99	58.924	Oreochromis_niloticus
ENSORLG00020020289	zgc:162730	100	98.058	ENSORLG00000027149	zgc:162730	100	98.058	Oryzias_latipes
ENSORLG00020020289	zgc:162730	100	98.063	ENSORLG00015001519	zgc:162730	100	98.063	Oryzias_latipes_hsok
ENSORLG00020020289	zgc:162730	100	80.723	ENSOMEG00000017752	zgc:162730	100	83.133	Oryzias_melastigma
ENSORLG00020020289	zgc:162730	100	61.466	ENSPFOG00000003665	zgc:162730	100	62.319	Poecilia_formosa
ENSORLG00020020289	zgc:162730	100	61.229	ENSPLAG00000000946	zgc:162730	99	60.520	Poecilia_latipinna
ENSORLG00020020289	zgc:162730	100	62.175	ENSPMEG00000000341	zgc:162730	99	61.466	Poecilia_mexicana
ENSORLG00020020289	zgc:162730	61	36.972	ENSPREG00000021254	zgc:114130	59	39.781	Poecilia_reticulata
ENSORLG00020020289	zgc:162730	100	62.175	ENSPREG00000021263	zgc:162730	99	61.466	Poecilia_reticulata
ENSORLG00020020289	zgc:162730	100	60.706	ENSPNYG00000015553	zgc:162730	99	61.176	Pundamilia_nyererei
ENSORLG00020020289	zgc:162730	63	35.316	ENSPNAG00000023029	zgc:114130	67	34.797	Pygocentrus_nattereri
ENSORLG00020020289	zgc:162730	65	49.265	ENSPNAG00000023018	zgc:162730	84	43.188	Pygocentrus_nattereri
ENSORLG00020020289	zgc:162730	100	61.538	ENSSMAG00000018612	zgc:162730	99	59.674	Scophthalmus_maximus
ENSORLG00020020289	zgc:162730	100	63.657	ENSSDUG00000002247	zgc:162730	99	61.806	Seriola_dumerili
ENSORLG00020020289	zgc:162730	100	63.194	ENSSLDG00000008502	zgc:162730	99	61.343	Seriola_lalandi_dorsalis
ENSORLG00020020289	zgc:162730	100	66.197	ENSSPAG00000006851	zgc:162730	99	64.319	Stegastes_partitus
ENSORLG00020020289	zgc:162730	100	59.198	ENSTRUG00000021229	zgc:162730	99	58.726	Takifugu_rubripes
ENSORLG00020020289	zgc:162730	95	55.941	ENSTNIG00000000183	zgc:162730	98	56.683	Tetraodon_nigroviridis
ENSORLG00020020289	zgc:162730	100	63.121	ENSXCOG00000012791	zgc:162730	99	61.229	Xiphophorus_couchianus
ENSORLG00020020289	zgc:162730	100	63.121	ENSXMAG00000018206	zgc:162730	99	61.229	Xiphophorus_maculatus