EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020020411 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 53482 bases
Position: chr19:4318081-4371562
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020034084	zf-met	PF12874.7	7.4e-28	1	4
ENSORLP00020034084	zf-met	PF12874.7	7.4e-28	2	4
ENSORLP00020034084	zf-met	PF12874.7	7.4e-28	3	4
ENSORLP00020034084	zf-met	PF12874.7	7.4e-28	4	4
ENSORLP00020034084	zf-C2H2_jaz	PF12171.8	5.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020028523	-	5150	-	ENSORLP00020034084	550 (aa)	-	-

Gene Model

Click here to download ENSORLG00020020411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020020411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020020411	-	67	50.538	ENSORLG00020012129	znf385d	94	35.080
ENSORLG00020020411	-	77	32.719	ENSORLG00020020832	ZNF385D	95	32.719
ENSORLG00020020411	-	75	35.377	ENSORLG00020004802	-	99	36.028
ENSORLG00020020411	-	67	43.316	ENSORLG00020015174	znf385b	99	39.868
ENSORLG00020020411	-	79	49.372	ENSORLG00020008564	znf385c	99	49.582
ENSORLG00020020411	-	77	35.065	ENSORLG00020008132	znf385a	99	36.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020020411	-	100	68.223	ENSAPOG00000020331	-	99	72.098	Acanthochromis_polyacanthus
ENSORLG00020020411	-	90	50.274	ENSAPOG00000015797	znf385c	99	50.206	Acanthochromis_polyacanthus
ENSORLG00020020411	-	81	65.702	ENSACIG00000009214	-	99	65.702	Amphilophus_citrinellus
ENSORLG00020020411	-	90	51.690	ENSACIG00000010548	znf385c	99	52.778	Amphilophus_citrinellus
ENSORLG00020020411	-	71	51.220	ENSAOCG00000012241	znf385c	100	51.220	Amphiprion_ocellaris
ENSORLG00020020411	-	100	67.621	ENSAOCG00000023140	-	99	71.111	Amphiprion_ocellaris
ENSORLG00020020411	-	93	52.652	ENSAPEG00000004794	znf385c	99	50.722	Amphiprion_percula
ENSORLG00020020411	-	91	64.414	ENSAPEG00000015578	-	98	64.892	Amphiprion_percula
ENSORLG00020020411	-	91	51.613	ENSATEG00000001826	znf385c	90	52.182	Anabas_testudineus
ENSORLG00020020411	-	79	62.785	ENSATEG00000022343	-	97	62.785	Anabas_testudineus
ENSORLG00020020411	-	79	46.224	ENSAPLG00000002883	ZNF385C	98	46.224	Anas_platyrhynchos
ENSORLG00020020411	-	90	45.972	ENSACAG00000016919	ZNF385C	94	45.972	Anolis_carolinensis
ENSORLG00020020411	-	90	51.445	ENSACLG00000002560	znf385c	99	49.287	Astatotilapia_calliptera
ENSORLG00020020411	-	99	67.143	ENSACLG00000008631	-	99	69.912	Astatotilapia_calliptera
ENSORLG00020020411	-	92	46.942	ENSAMXG00000000412	znf385c	98	46.584	Astyanax_mexicanus
ENSORLG00020020411	-	91	48.723	ENSAMXG00000021355	-	99	49.378	Astyanax_mexicanus
ENSORLG00020020411	-	89	43.083	ENSBTAG00000046162	ZNF385C	94	43.504	Bos_taurus
ENSORLG00020020411	-	79	41.573	ENSCAFG00020013967	ZNF385C	98	43.956	Canis_lupus_dingo
ENSORLG00020020411	-	79	42.506	ENSCHIG00000013858	ZNF385C	98	44.098	Capra_hircus
ENSORLG00020020411	-	75	40.416	ENSCAPG00000011124	ZNF385C	98	41.794	Cavia_aperea
ENSORLG00020020411	-	75	41.435	ENSCPOG00000006417	ZNF385C	98	41.886	Cavia_porcellus
ENSORLG00020020411	-	88	42.376	ENSCCAG00000030786	ZNF385C	97	43.267	Cebus_capucinus
ENSORLG00020020411	-	75	41.608	ENSCLAG00000015100	ZNF385C	98	43.844	Chinchilla_lanigera
ENSORLG00020020411	-	90	47.295	ENSCPBG00000006782	ZNF385C	98	47.955	Chrysemys_picta_bellii
ENSORLG00020020411	-	79	41.151	ENSCGRG00001021185	Zfp385c	97	43.764	Cricetulus_griseus_chok1gshd
ENSORLG00020020411	-	79	41.151	ENSCGRG00000008226	Zfp385c	97	43.764	Cricetulus_griseus_crigri
ENSORLG00020020411	-	93	48.000	ENSCSEG00000021383	znf385c	98	49.180	Cynoglossus_semilaevis
ENSORLG00020020411	-	89	61.616	ENSCSEG00000007490	-	100	61.616	Cynoglossus_semilaevis
ENSORLG00020020411	-	93	48.873	ENSCVAG00000009496	znf385c	99	50.203	Cyprinodon_variegatus
ENSORLG00020020411	-	99	62.590	ENSCVAG00000003335	-	99	64.667	Cyprinodon_variegatus
ENSORLG00020020411	-	79	45.679	ENSDARG00000058154	znf385c	100	47.196	Danio_rerio
ENSORLG00020020411	-	53	68.571	ENSDNOG00000008734	-	52	57.778	Dasypus_novemcinctus
ENSORLG00020020411	-	79	44.344	ENSDORG00000001917	Zfp385c	98	44.344	Dipodomys_ordii
ENSORLG00020020411	-	79	41.099	ENSEASG00005009102	ZNF385C	98	42.478	Equus_asinus_asinus
ENSORLG00020020411	-	91	51.878	ENSELUG00000010408	-	99	50.813	Esox_lucius
ENSORLG00020020411	-	81	49.782	ENSELUG00000018401	znf385c	100	49.782	Esox_lucius
ENSORLG00020020411	-	90	47.705	ENSFALG00000000647	ZNF385C	94	47.705	Ficedula_albicollis
ENSORLG00020020411	-	76	38.283	ENSFDAG00000017941	ZNF385C	98	40.092	Fukomys_damarensis
ENSORLG00020020411	-	67	56.824	ENSFHEG00000010106	-	94	57.072	Fundulus_heteroclitus
ENSORLG00020020411	-	77	48.434	ENSFHEG00000012220	znf385c	89	48.643	Fundulus_heteroclitus
ENSORLG00020020411	-	79	44.144	ENSGMOG00000011879	znf385c	99	44.144	Gadus_morhua
ENSORLG00020020411	-	71	45.293	ENSGALG00000003403	ZNF385C	92	45.293	Gallus_gallus
ENSORLG00020020411	-	79	51.724	ENSGAFG00000001005	znf385c	98	52.802	Gambusia_affinis
ENSORLG00020020411	-	99	64.695	ENSGAFG00000003621	-	100	65.756	Gambusia_affinis
ENSORLG00020020411	-	81	51.087	ENSGACG00000008756	znf385c	99	51.087	Gasterosteus_aculeatus
ENSORLG00020020411	-	91	47.002	ENSGAGG00000023263	ZNF385C	98	46.637	Gopherus_agassizii
ENSORLG00020020411	-	98	67.701	ENSHBUG00000003996	-	99	69.248	Haplochromis_burtoni
ENSORLG00020020411	-	90	51.638	ENSHBUG00000001935	znf385c	99	49.287	Haplochromis_burtoni
ENSORLG00020020411	-	75	41.535	ENSHGLG00000013481	ZNF385C	98	41.432	Heterocephalus_glaber_female
ENSORLG00020020411	-	71	40.995	ENSHGLG00100011307	ZNF385C	93	40.603	Heterocephalus_glaber_male
ENSORLG00020020411	-	90	50.860	ENSHCOG00000004896	znf385c	100	51.434	Hippocampus_comes
ENSORLG00020020411	-	91	58.350	ENSHCOG00000020248	-	93	58.743	Hippocampus_comes
ENSORLG00020020411	-	93	46.377	ENSIPUG00000017483	znf385c	92	47.015	Ictalurus_punctatus
ENSORLG00020020411	-	79	44.934	ENSSTOG00000020287	ZNF385C	97	44.956	Ictidomys_tridecemlineatus
ENSORLG00020020411	-	79	41.950	ENSJJAG00000020892	Zfp385c	97	44.130	Jaculus_jaculus
ENSORLG00020020411	-	90	50.741	ENSKMAG00000020120	znf385c	99	50.833	Kryptolebias_marmoratus
ENSORLG00020020411	-	91	70.508	ENSKMAG00000017463	-	99	70.000	Kryptolebias_marmoratus
ENSORLG00020020411	-	98	62.898	ENSLBEG00000021407	-	99	65.385	Labrus_bergylta
ENSORLG00020020411	-	93	46.667	ENSLBEG00000004271	znf385c	99	47.573	Labrus_bergylta
ENSORLG00020020411	-	53	68.605	ENSLACG00000005345	ZNF385C	68	44.064	Latimeria_chalumnae
ENSORLG00020020411	-	90	46.916	ENSLOCG00000012589	znf385c	96	46.667	Lepisosteus_oculatus
ENSORLG00020020411	-	67	53.763	ENSLAFG00000013959	ZNF385C	100	43.182	Loxodonta_africana
ENSORLG00020020411	-	99	65.536	ENSMAMG00000016188	-	99	65.357	Mastacembelus_armatus
ENSORLG00020020411	-	90	51.533	ENSMAMG00000022312	znf385c	95	51.434	Mastacembelus_armatus
ENSORLG00020020411	-	90	51.357	ENSMZEG00005022745	znf385c	99	48.971	Maylandia_zebra
ENSORLG00020020411	-	99	67.143	ENSMZEG00005021094	-	99	69.912	Maylandia_zebra
ENSORLG00020020411	-	58	37.152	ENSMGAG00000003221	-	79	37.152	Meleagris_gallopavo
ENSORLG00020020411	-	80	42.275	ENSMAUG00000020342	Zfp385c	99	41.942	Mesocricetus_auratus
ENSORLG00020020411	-	79	42.117	ENSMOCG00000006378	Zfp385c	98	42.275	Microtus_ochrogaster
ENSORLG00020020411	-	89	51.852	ENSMMOG00000020703	znf385c	99	51.852	Mola_mola
ENSORLG00020020411	-	80	58.389	ENSMMOG00000013984	-	97	58.389	Mola_mola
ENSORLG00020020411	-	79	42.889	ENSMODG00000014774	ZNF385C	99	44.222	Monodelphis_domestica
ENSORLG00020020411	-	90	51.923	ENSMALG00000006626	znf385c	99	48.980	Monopterus_albus
ENSORLG00020020411	-	80	65.247	ENSMALG00000022342	-	99	66.443	Monopterus_albus
ENSORLG00020020411	-	79	42.325	MGP_CAROLIEiJ_G0017180	Zfp385c	97	43.450	Mus_caroli
ENSORLG00020020411	-	71	61.675	ENSNBRG00000016947	-	100	61.675	Neolamprologus_brichardi
ENSORLG00020020411	-	72	47.525	ENSNBRG00000018835	znf385c	100	47.677	Neolamprologus_brichardi
ENSORLG00020020411	-	71	38.889	ENSMEUG00000016616	ZNF385C	100	41.045	Notamacropus_eugenii
ENSORLG00020020411	-	55	53.000	ENSOPRG00000008120	ZNF385C	88	38.971	Ochotona_princeps
ENSORLG00020020411	-	91	68.945	ENSONIG00000016281	-	95	68.945	Oreochromis_niloticus
ENSORLG00020020411	-	81	50.221	ENSONIG00000001083	znf385c	99	50.221	Oreochromis_niloticus
ENSORLG00020020411	-	54	38.206	ENSOANG00000004705	-	88	39.073	Ornithorhynchus_anatinus
ENSORLG00020020411	-	89	41.929	ENSOCUG00000013271	ZNF385C	94	43.689	Oryctolagus_cuniculus
ENSORLG00020020411	-	90	49.097	ENSORLG00000003810	znf385c	98	52.711	Oryzias_latipes
ENSORLG00020020411	-	100	98.000	ENSORLG00000029969	-	100	98.000	Oryzias_latipes
ENSORLG00020020411	-	100	97.636	ENSORLG00015000506	-	100	97.636	Oryzias_latipes_hsok
ENSORLG00020020411	-	95	46.970	ENSORLG00015022036	znf385c	91	49.638	Oryzias_latipes_hsok
ENSORLG00020020411	-	88	44.208	ENSOMEG00000022981	znf385c	98	48.655	Oryzias_melastigma
ENSORLG00020020411	-	100	85.455	ENSOMEG00000004855	ZNF385C	100	85.289	Oryzias_melastigma
ENSORLG00020020411	-	88	42.915	ENSOGAG00000017196	ZNF385C	94	43.701	Otolemur_garnettii
ENSORLG00020020411	-	90	50.464	ENSPKIG00000001346	ZNF385C	98	50.939	Paramormyrops_kingsleyae
ENSORLG00020020411	-	90	48.679	ENSPKIG00000020227	znf385c	98	48.498	Paramormyrops_kingsleyae
ENSORLG00020020411	-	78	47.319	ENSPSIG00000007592	ZNF385C	96	47.319	Pelodiscus_sinensis
ENSORLG00020020411	-	79	41.447	ENSPCIG00000020238	ZNF385C	99	43.207	Phascolarctos_cinereus
ENSORLG00020020411	-	90	46.928	ENSPFOG00000011713	znf385c	98	50.769	Poecilia_formosa
ENSORLG00020020411	-	99	65.761	ENSPFOG00000005958	-	100	67.288	Poecilia_formosa
ENSORLG00020020411	-	90	50.000	ENSPLAG00000021677	znf385c	99	49.899	Poecilia_latipinna
ENSORLG00020020411	-	99	65.761	ENSPLAG00000016301	-	100	66.419	Poecilia_latipinna
ENSORLG00020020411	-	90	49.460	ENSPMEG00000011416	znf385c	99	49.293	Poecilia_mexicana
ENSORLG00020020411	-	98	66.234	ENSPMEG00000012593	-	100	66.419	Poecilia_mexicana
ENSORLG00020020411	-	96	58.757	ENSPREG00000022214	-	100	59.023	Poecilia_reticulata
ENSORLG00020020411	-	90	48.511	ENSPREG00000010489	znf385c	91	48.155	Poecilia_reticulata
ENSORLG00020020411	-	91	61.417	ENSPNYG00000015868	-	94	61.417	Pundamilia_nyererei
ENSORLG00020020411	-	90	48.207	ENSPNYG00000011104	znf385c	99	49.260	Pundamilia_nyererei
ENSORLG00020020411	-	90	51.859	ENSPNAG00000012405	-	99	48.958	Pygocentrus_nattereri
ENSORLG00020020411	-	75	51.069	ENSPNAG00000028718	znf385c	99	51.069	Pygocentrus_nattereri
ENSORLG00020020411	-	88	43.177	ENSSBOG00000030723	ZNF385C	97	43.860	Saimiri_boliviensis_boliviensis
ENSORLG00020020411	-	89	43.114	ENSSHAG00000006918	ZNF385C	94	43.811	Sarcophilus_harrisii
ENSORLG00020020411	-	58	46.106	ENSSFOG00015010100	ZNF385C	86	46.106	Scleropages_formosus
ENSORLG00020020411	-	58	49.538	ENSSFOG00015023128	znf385c	75	49.538	Scleropages_formosus
ENSORLG00020020411	-	90	49.536	ENSSMAG00000007453	znf385c	98	49.686	Scophthalmus_maximus
ENSORLG00020020411	-	99	65.511	ENSSMAG00000020018	-	99	68.456	Scophthalmus_maximus
ENSORLG00020020411	-	93	47.834	ENSSDUG00000022960	znf385c	99	49.190	Seriola_dumerili
ENSORLG00020020411	-	99	67.736	ENSSDUG00000021332	-	99	67.914	Seriola_dumerili
ENSORLG00020020411	-	91	51.509	ENSSLDG00000017600	znf385c	99	49.095	Seriola_lalandi_dorsalis
ENSORLG00020020411	-	99	67.736	ENSSLDG00000019275	-	99	71.111	Seriola_lalandi_dorsalis
ENSORLG00020020411	-	79	45.103	ENSSPUG00000013129	ZNF385C	98	45.103	Sphenodon_punctatus
ENSORLG00020020411	-	79	48.880	ENSSPAG00000006535	znf385c	99	49.385	Stegastes_partitus
ENSORLG00020020411	-	80	72.331	ENSSPAG00000014005	-	99	72.331	Stegastes_partitus
ENSORLG00020020411	-	90	46.457	ENSTGUG00000002501	ZNF385C	99	46.457	Taeniopygia_guttata
ENSORLG00020020411	-	98	57.856	ENSTRUG00000011082	-	100	58.672	Takifugu_rubripes
ENSORLG00020020411	-	79	51.835	ENSTRUG00000015771	znf385c	97	50.000	Takifugu_rubripes
ENSORLG00020020411	-	80	33.115	ENSTNIG00000005317	-	91	66.418	Tetraodon_nigroviridis
ENSORLG00020020411	-	79	48.758	ENSTNIG00000011714	znf385c	99	48.758	Tetraodon_nigroviridis
ENSORLG00020020411	-	52	62.651	ENSVVUG00000020910	ZNF385C	94	43.860	Vulpes_vulpes
ENSORLG00020020411	-	79	41.612	ENSXETG00000002298	znf385c	97	41.469	Xenopus_tropicalis
ENSORLG00020020411	-	92	61.765	ENSXCOG00000006303	-	99	63.189	Xiphophorus_couchianus
ENSORLG00020020411	-	90	48.750	ENSXMAG00000008886	znf385c	81	48.663	Xiphophorus_maculatus
ENSORLG00020020411	-	99	63.669	ENSXMAG00000010258	-	99	66.219	Xiphophorus_maculatus