EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020020545 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 1179 bases
Position: chr8:10019290-10020468
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020019538	RRM_1	PF00076.22	1.8e-08	1	1
ENSORLP00020034176	RRM_1	PF00076.22	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020028733	-	846	-	ENSORLP00020034176	168 (aa)	-	-
ENSORLT00020035213	-	746	-	ENSORLP00020019538	163 (aa)	-	-

Gene Model

Click here to download ENSORLG00020020545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020020545's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020020545	-	63	48.077	ENSACIG00000013907	-	94	48.077	Amphilophus_citrinellus
ENSORLG00020020545	-	63	51.923	ENSAOCG00000013396	-	75	51.923	Amphiprion_ocellaris
ENSORLG00020020545	-	61	51.961	ENSAPEG00000003539	-	75	51.961	Amphiprion_percula
ENSORLG00020020545	-	70	45.614	ENSATEG00000024207	-	90	45.614	Anabas_testudineus
ENSORLG00020020545	-	89	52.027	ENSACLG00000025617	-	96	52.027	Astatotilapia_calliptera
ENSORLG00020020545	-	61	38.000	ENSCVAG00000011461	-	82	38.000	Cyprinodon_variegatus
ENSORLG00020020545	-	79	41.985	ENSELUG00000014190	RO21	98	41.985	Esox_lucius
ENSORLG00020020545	-	60	38.144	ENSGMOG00000000626	-	87	38.144	Gadus_morhua
ENSORLG00020020545	-	89	51.351	ENSHBUG00000002750	-	96	51.351	Haplochromis_burtoni
ENSORLG00020020545	-	91	48.667	ENSLBEG00000023432	-	94	46.491	Labrus_bergylta
ENSORLG00020020545	-	89	52.703	ENSMZEG00005013064	-	96	52.703	Maylandia_zebra
ENSORLG00020020545	-	65	41.509	ENSMMOG00000010899	-	86	41.509	Mola_mola
ENSORLG00020020545	-	88	51.748	ENSNBRG00000023103	-	97	51.748	Neolamprologus_brichardi
ENSORLG00020020545	-	79	53.077	ENSONIG00000005302	-	100	53.077	Oreochromis_niloticus
ENSORLG00020020545	-	100	94.643	ENSORLG00000026996	-	100	94.643	Oryzias_latipes
ENSORLG00020020545	-	71	94.167	ENSORLG00015010118	-	78	94.167	Oryzias_latipes_hsok
ENSORLG00020020545	-	99	70.370	ENSOMEG00000008826	-	99	70.370	Oryzias_melastigma
ENSORLG00020020545	-	64	49.524	ENSPMGG00000003488	-	88	49.524	Periophthalmus_magnuspinnatus
ENSORLG00020020545	-	87	51.748	ENSPNYG00000019872	-	95	51.748	Pundamilia_nyererei
ENSORLG00020020545	-	66	42.056	ENSSMAG00000017418	-	79	42.056	Scophthalmus_maximus
ENSORLG00020020545	-	66	47.222	ENSSDUG00000011905	-	76	47.222	Seriola_dumerili
ENSORLG00020020545	-	87	52.448	ENSSLDG00000021809	-	95	52.448	Seriola_lalandi_dorsalis
ENSORLG00020020545	-	61	55.000	ENSSPAG00000004304	-	93	55.000	Stegastes_partitus
ENSORLG00020020545	-	61	40.404	ENSTRUG00000023389	-	84	40.404	Takifugu_rubripes