EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020020569 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: -
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1 a
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 15848 bases
Position: chr9:9043932-9059779
Accession: ZDB-GENE-050522-499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020034178	ResIII	PF04851.15	5e-07	1	1
ENSORLP00020019558	ResIII	PF04851.15	5.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020035220	-	3159	-	ENSORLP00020019558	1052 (aa)	-	-
ENSORLT00020035233	-	3063	-	ENSORLP00020034178	1020 (aa)	-	-

Gene Model

Click here to download ENSORLG00020020569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020020569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020020569	smarcad1a	68	60.989	ENSG00000163104	SMARCAD1	99	66.667	Homo_sapiens
ENSORLG00020020569	smarcad1a	100	73.807	ENSAPOG00000011446	smarcad1a	100	72.854	Acanthochromis_polyacanthus
ENSORLG00020020569	smarcad1a	93	61.295	ENSAMEG00000005844	SMARCAD1	93	65.060	Ailuropoda_melanoleuca
ENSORLG00020020569	smarcad1a	70	86.252	ENSACIG00000018326	smarcad1a	100	86.252	Amphilophus_citrinellus
ENSORLG00020020569	smarcad1a	100	73.084	ENSAOCG00000019762	smarcad1a	100	72.626	Amphiprion_ocellaris
ENSORLG00020020569	smarcad1a	100	73.464	ENSAPEG00000003889	smarcad1a	100	72.905	Amphiprion_percula
ENSORLG00020020569	smarcad1a	95	72.206	ENSATEG00000015608	smarcad1a	99	72.206	Anabas_testudineus
ENSORLG00020020569	smarcad1a	77	66.511	ENSAPLG00000004630	SMARCAD1	89	64.759	Anas_platyrhynchos
ENSORLG00020020569	smarcad1a	63	63.947	ENSACAG00000013554	SMARCAD1	63	65.888	Anolis_carolinensis
ENSORLG00020020569	smarcad1a	84	61.210	ENSANAG00000020488	SMARCAD1	89	65.060	Aotus_nancymaae
ENSORLG00020020569	smarcad1a	100	70.971	ENSACLG00000017063	smarcad1a	100	71.295	Astatotilapia_calliptera
ENSORLG00020020569	smarcad1a	74	68.457	ENSAMXG00000019130	smarcad1b	77	74.233	Astyanax_mexicanus
ENSORLG00020020569	smarcad1a	65	70.690	ENSAMXG00000015470	smarcad1a	92	72.796	Astyanax_mexicanus
ENSORLG00020020569	smarcad1a	68	61.401	ENSBTAG00000017061	SMARCAD1	65	65.165	Bos_taurus
ENSORLG00020020569	smarcad1a	62	42.192	WBGene00010845	M03C11.8	66	42.185	Caenorhabditis_elegans
ENSORLG00020020569	smarcad1a	68	60.996	ENSCJAG00000006778	SMARCAD1	65	65.060	Callithrix_jacchus
ENSORLG00020020569	smarcad1a	93	61.570	ENSCAFG00000010026	SMARCAD1	93	65.361	Canis_familiaris
ENSORLG00020020569	smarcad1a	84	61.570	ENSCAFG00020003994	SMARCAD1	91	65.361	Canis_lupus_dingo
ENSORLG00020020569	smarcad1a	68	61.295	ENSCHIG00000012905	SMARCAD1	65	65.060	Capra_hircus
ENSORLG00020020569	smarcad1a	69	61.073	ENSTSYG00000002706	SMARCAD1	65	64.910	Carlito_syrichta
ENSORLG00020020569	smarcad1a	91	56.259	ENSCAPG00000016744	SMARCAD1	88	60.161	Cavia_aperea
ENSORLG00020020569	smarcad1a	68	61.411	ENSCPOG00000011398	SMARCAD1	64	65.211	Cavia_porcellus
ENSORLG00020020569	smarcad1a	68	60.996	ENSCCAG00000022264	SMARCAD1	99	66.667	Cebus_capucinus
ENSORLG00020020569	smarcad1a	89	61.134	ENSCATG00000035663	SMARCAD1	91	65.060	Cercocebus_atys
ENSORLG00020020569	smarcad1a	85	61.134	ENSCSAG00000004186	SMARCAD1	100	65.060	Chlorocebus_sabaeus
ENSORLG00020020569	smarcad1a	86	61.317	ENSCPBG00000013203	SMARCAD1	94	66.822	Chrysemys_picta_bellii
ENSORLG00020020569	smarcad1a	62	49.242	ENSCING00000001688	-	99	49.472	Ciona_intestinalis
ENSORLG00020020569	smarcad1a	68	60.996	ENSCANG00000003556	SMARCAD1	99	66.667	Colobus_angolensis_palliatus
ENSORLG00020020569	smarcad1a	64	63.947	ENSCGRG00001015056	Smarcad1	65	65.211	Cricetulus_griseus_chok1gshd
ENSORLG00020020569	smarcad1a	64	63.947	ENSCGRG00000014087	Smarcad1	65	65.211	Cricetulus_griseus_crigri
ENSORLG00020020569	smarcad1a	100	64.239	ENSCSEG00000014419	-	100	64.531	Cynoglossus_semilaevis
ENSORLG00020020569	smarcad1a	100	64.695	ENSCSEG00000017903	smarcad1a	100	64.690	Cynoglossus_semilaevis
ENSORLG00020020569	smarcad1a	83	73.886	ENSDARG00000073721	smarcad1b	91	73.252	Danio_rerio
ENSORLG00020020569	smarcad1a	83	75.079	ENSDARG00000014041	smarcad1a	100	57.495	Danio_rerio
ENSORLG00020020569	smarcad1a	69	60.905	ENSDNOG00000000806	-	65	65.060	Dasypus_novemcinctus
ENSORLG00020020569	smarcad1a	69	60.519	ENSDORG00000012331	Smarcad1	63	65.991	Dipodomys_ordii
ENSORLG00020020569	smarcad1a	61	44.717	FBgn0032157	Etl1	78	44.528	Drosophila_melanogaster
ENSORLG00020020569	smarcad1a	60	47.642	ENSEBUG00000003969	smarcad1a	94	48.099	Eptatretus_burgeri
ENSORLG00020020569	smarcad1a	68	61.295	ENSEASG00005012382	SMARCAD1	74	63.459	Equus_asinus_asinus
ENSORLG00020020569	smarcad1a	68	61.295	ENSECAG00000011562	SMARCAD1	65	65.060	Equus_caballus
ENSORLG00020020569	smarcad1a	100	63.679	ENSELUG00000018535	smarcad1a	100	63.679	Esox_lucius
ENSORLG00020020569	smarcad1a	76	66.008	ENSELUG00000019154	smarcad1b	75	70.279	Esox_lucius
ENSORLG00020020569	smarcad1a	68	61.295	ENSFCAG00000003958	SMARCAD1	99	66.835	Felis_catus
ENSORLG00020020569	smarcad1a	68	62.379	ENSFALG00000006089	SMARCAD1	64	65.512	Ficedula_albicollis
ENSORLG00020020569	smarcad1a	68	61.411	ENSFDAG00000017027	SMARCAD1	65	65.211	Fukomys_damarensis
ENSORLG00020020569	smarcad1a	100	67.550	ENSFHEG00000012778	smarcad1a	100	68.007	Fundulus_heteroclitus
ENSORLG00020020569	smarcad1a	83	75.804	ENSGMOG00000018995	smarcad1a	97	76.967	Gadus_morhua
ENSORLG00020020569	smarcad1a	72	60.552	ENSGALG00000037339	SMARCAD1	89	60.471	Gallus_gallus
ENSORLG00020020569	smarcad1a	100	65.486	ENSGAFG00000013498	smarcad1a	100	65.758	Gambusia_affinis
ENSORLG00020020569	smarcad1a	83	80.280	ENSGACG00000007327	smarcad1a	97	81.545	Gasterosteus_aculeatus
ENSORLG00020020569	smarcad1a	100	48.854	ENSGAGG00000008582	SMARCAD1	63	66.978	Gopherus_agassizii
ENSORLG00020020569	smarcad1a	68	61.134	ENSGGOG00000023001	SMARCAD1	65	65.060	Gorilla_gorilla
ENSORLG00020020569	smarcad1a	100	71.065	ENSHBUG00000011042	smarcad1a	100	71.295	Haplochromis_burtoni
ENSORLG00020020569	smarcad1a	68	61.411	ENSHGLG00000005070	SMARCAD1	65	65.211	Heterocephalus_glaber_female
ENSORLG00020020569	smarcad1a	68	61.411	ENSHGLG00100006812	SMARCAD1	65	65.211	Heterocephalus_glaber_male
ENSORLG00020020569	smarcad1a	100	59.659	ENSHCOG00000007848	smarcad1a	100	59.622	Hippocampus_comes
ENSORLG00020020569	smarcad1a	98	56.667	ENSIPUG00000000242	smarcad1a	97	58.824	Ictalurus_punctatus
ENSORLG00020020569	smarcad1a	64	70.370	ENSIPUG00000022817	smarcad1b	70	72.393	Ictalurus_punctatus
ENSORLG00020020569	smarcad1a	69	61.073	ENSSTOG00000001227	SMARCAD1	65	64.759	Ictidomys_tridecemlineatus
ENSORLG00020020569	smarcad1a	71	59.225	ENSJJAG00000022342	Smarcad1	65	64.910	Jaculus_jaculus
ENSORLG00020020569	smarcad1a	99	70.699	ENSKMAG00000021351	smarcad1a	99	71.550	Kryptolebias_marmoratus
ENSORLG00020020569	smarcad1a	100	67.981	ENSLBEG00000008088	smarcad1a	99	68.972	Labrus_bergylta
ENSORLG00020020569	smarcad1a	84	73.733	ENSLOCG00000012909	smarcad1a	93	73.182	Lepisosteus_oculatus
ENSORLG00020020569	smarcad1a	68	59.504	ENSLAFG00000000040	SMARCAD1	65	63.253	Loxodonta_africana
ENSORLG00020020569	smarcad1a	89	61.134	ENSMFAG00000042606	SMARCAD1	91	65.060	Macaca_fascicularis
ENSORLG00020020569	smarcad1a	89	61.134	ENSMMUG00000022242	SMARCAD1	91	65.060	Macaca_mulatta
ENSORLG00020020569	smarcad1a	68	61.134	ENSMNEG00000038117	SMARCAD1	99	66.667	Macaca_nemestrina
ENSORLG00020020569	smarcad1a	68	61.134	ENSMLEG00000038333	SMARCAD1	99	66.667	Mandrillus_leucophaeus
ENSORLG00020020569	smarcad1a	100	72.217	ENSMAMG00000000933	smarcad1a	100	72.744	Mastacembelus_armatus
ENSORLG00020020569	smarcad1a	100	70.605	ENSMZEG00005005203	smarcad1a	100	70.273	Maylandia_zebra
ENSORLG00020020569	smarcad1a	80	63.994	ENSMGAG00000005577	SMARCAD1	84	63.994	Meleagris_gallopavo
ENSORLG00020020569	smarcad1a	63	64.978	ENSMAUG00000008417	Smarcad1	65	65.512	Mesocricetus_auratus
ENSORLG00020020569	smarcad1a	68	61.538	ENSMICG00000009746	SMARCAD1	65	65.315	Microcebus_murinus
ENSORLG00020020569	smarcad1a	64	63.947	ENSMOCG00000017142	Smarcad1	65	65.211	Microtus_ochrogaster
ENSORLG00020020569	smarcad1a	69	82.090	ENSMMOG00000000275	smarcad1a	99	82.523	Mola_mola
ENSORLG00020020569	smarcad1a	100	47.814	ENSMODG00000019268	SMARCAD1	65	65.512	Monodelphis_domestica
ENSORLG00020020569	smarcad1a	82	63.947	MGP_CAROLIEiJ_G0028458	-	64	65.211	Mus_caroli
ENSORLG00020020569	smarcad1a	64	63.947	ENSMUSG00000029920	Smarcad1	63	66.459	Mus_musculus
ENSORLG00020020569	smarcad1a	100	47.778	MGP_PahariEiJ_G0022198	Smarcad1	63	66.459	Mus_pahari
ENSORLG00020020569	smarcad1a	64	63.947	MGP_SPRETEiJ_G0029462	Smarcad1	63	66.459	Mus_spretus
ENSORLG00020020569	smarcad1a	68	61.295	ENSMPUG00000002111	SMARCAD1	65	65.060	Mustela_putorius_furo
ENSORLG00020020569	smarcad1a	68	61.264	ENSMLUG00000000425	SMARCAD1	63	66.563	Myotis_lucifugus
ENSORLG00020020569	smarcad1a	68	61.157	ENSNGAG00000000810	Smarcad1	65	64.759	Nannospalax_galili
ENSORLG00020020569	smarcad1a	74	76.276	ENSNBRG00000012749	smarcad1a	94	76.276	Neolamprologus_brichardi
ENSORLG00020020569	smarcad1a	68	61.134	ENSNLEG00000014225	SMARCAD1	99	66.667	Nomascus_leucogenys
ENSORLG00020020569	smarcad1a	68	61.486	ENSODEG00000004334	SMARCAD1	65	65.060	Octodon_degus
ENSORLG00020020569	smarcad1a	84	84.555	ENSONIG00000015059	smarcad1a	100	83.384	Oreochromis_niloticus
ENSORLG00020020569	smarcad1a	72	65.964	ENSOANG00000013764	SMARCAD1	91	65.865	Ornithorhynchus_anatinus
ENSORLG00020020569	smarcad1a	69	61.180	ENSOCUG00000017283	SMARCAD1	65	65.211	Oryctolagus_cuniculus
ENSORLG00020020569	smarcad1a	100	98.859	ENSORLG00000004869	smarcad1a	100	98.859	Oryzias_latipes
ENSORLG00020020569	smarcad1a	100	98.764	ENSORLG00015009045	smarcad1a	100	98.764	Oryzias_latipes_hsok
ENSORLG00020020569	smarcad1a	99	87.048	ENSOMEG00000023032	smarcad1a	100	86.857	Oryzias_melastigma
ENSORLG00020020569	smarcad1a	68	60.989	ENSOGAG00000011444	SMARCAD1	65	64.715	Otolemur_garnettii
ENSORLG00020020569	smarcad1a	68	61.295	ENSOARG00000017851	SMARCAD1	65	65.060	Ovis_aries
ENSORLG00020020569	smarcad1a	68	61.134	ENSPPAG00000035715	SMARCAD1	65	65.060	Pan_paniscus
ENSORLG00020020569	smarcad1a	93	61.295	ENSPPRG00000024756	SMARCAD1	99	66.835	Panthera_pardus
ENSORLG00020020569	smarcad1a	93	61.401	ENSPTIG00000017868	SMARCAD1	93	65.315	Panthera_tigris_altaica
ENSORLG00020020569	smarcad1a	68	61.134	ENSPTRG00000023126	SMARCAD1	99	66.667	Pan_troglodytes
ENSORLG00020020569	smarcad1a	68	59.780	ENSPANG00000019757	SMARCAD1	65	63.568	Papio_anubis
ENSORLG00020020569	smarcad1a	98	61.591	ENSPSIG00000010255	SMARCAD1	91	67.757	Pelodiscus_sinensis
ENSORLG00020020569	smarcad1a	61	77.125	ENSPMGG00000010735	smarcad1a	93	76.935	Periophthalmus_magnuspinnatus
ENSORLG00020020569	smarcad1a	69	53.434	ENSPEMG00000001854	Smarcad1	65	57.014	Peromyscus_maniculatus_bairdii
ENSORLG00020020569	smarcad1a	94	54.251	ENSPMAG00000003516	smarcad1a	92	57.635	Petromyzon_marinus
ENSORLG00020020569	smarcad1a	77	64.897	ENSPCIG00000008137	SMARCAD1	97	65.964	Phascolarctos_cinereus
ENSORLG00020020569	smarcad1a	100	67.942	ENSPFOG00000019116	smarcad1a	100	67.971	Poecilia_formosa
ENSORLG00020020569	smarcad1a	100	67.425	ENSPLAG00000000108	smarcad1a	100	67.818	Poecilia_latipinna
ENSORLG00020020569	smarcad1a	100	67.942	ENSPMEG00000009155	smarcad1a	100	67.971	Poecilia_mexicana
ENSORLG00020020569	smarcad1a	100	69.840	ENSPREG00000018185	smarcad1a	100	70.028	Poecilia_reticulata
ENSORLG00020020569	smarcad1a	68	60.966	ENSPPYG00000014935	SMARCAD1	65	64.865	Pongo_abelii
ENSORLG00020020569	smarcad1a	69	52.109	ENSPCOG00000020478	SMARCAD1	74	55.422	Propithecus_coquereli
ENSORLG00020020569	smarcad1a	68	60.719	ENSPVAG00000001760	SMARCAD1	64	64.555	Pteropus_vampyrus
ENSORLG00020020569	smarcad1a	72	76.540	ENSPNYG00000010087	smarcad1a	92	77.516	Pundamilia_nyererei
ENSORLG00020020569	smarcad1a	100	58.034	ENSPNAG00000001663	smarcad1a	100	57.979	Pygocentrus_nattereri
ENSORLG00020020569	smarcad1a	65	70.554	ENSPNAG00000010099	smarcad1b	70	73.620	Pygocentrus_nattereri
ENSORLG00020020569	smarcad1a	64	64.095	ENSRNOG00000006391	Smarcad1	63	66.615	Rattus_norvegicus
ENSORLG00020020569	smarcad1a	68	61.134	ENSRBIG00000041989	SMARCAD1	65	65.060	Rhinopithecus_bieti
ENSORLG00020020569	smarcad1a	68	61.134	ENSRROG00000035309	SMARCAD1	65	65.060	Rhinopithecus_roxellana
ENSORLG00020020569	smarcad1a	68	60.996	ENSSBOG00000032114	SMARCAD1	99	66.667	Saimiri_boliviensis_boliviensis
ENSORLG00020020569	smarcad1a	87	65.663	ENSSHAG00000001279	SMARCAD1	93	65.663	Sarcophilus_harrisii
ENSORLG00020020569	smarcad1a	67	68.811	ENSSFOG00015020909	smarcad1a	92	69.928	Scleropages_formosus
ENSORLG00020020569	smarcad1a	86	75.635	ENSSFOG00015016814	smarcad1b	90	76.097	Scleropages_formosus
ENSORLG00020020569	smarcad1a	100	70.539	ENSSMAG00000001326	smarcad1a	100	71.283	Scophthalmus_maximus
ENSORLG00020020569	smarcad1a	73	78.599	ENSSDUG00000022338	smarcad1a	92	79.070	Seriola_dumerili
ENSORLG00020020569	smarcad1a	100	69.880	ENSSLDG00000024986	smarcad1a	100	70.795	Seriola_lalandi_dorsalis
ENSORLG00020020569	smarcad1a	56	67.059	ENSSPUG00000004633	SMARCAD1	99	67.059	Sphenodon_punctatus
ENSORLG00020020569	smarcad1a	100	71.910	ENSSPAG00000001970	smarcad1a	100	72.533	Stegastes_partitus
ENSORLG00020020569	smarcad1a	92	61.295	ENSSSCG00000009193	SMARCAD1	93	65.060	Sus_scrofa
ENSORLG00020020569	smarcad1a	74	61.851	ENSTGUG00000003127	SMARCAD1	93	65.060	Taeniopygia_guttata
ENSORLG00020020569	smarcad1a	85	81.062	ENSTNIG00000017585	smarcad1a	96	80.918	Tetraodon_nigroviridis
ENSORLG00020020569	smarcad1a	76	69.246	ENSTBEG00000002789	SMARCAD1	84	69.246	Tupaia_belangeri
ENSORLG00020020569	smarcad1a	83	61.210	ENSTTRG00000000226	SMARCAD1	91	64.962	Tursiops_truncatus
ENSORLG00020020569	smarcad1a	93	61.295	ENSUAMG00000022262	SMARCAD1	93	65.060	Ursus_americanus
ENSORLG00020020569	smarcad1a	93	61.295	ENSUMAG00000004549	SMARCAD1	93	65.060	Ursus_maritimus
ENSORLG00020020569	smarcad1a	81	61.433	ENSVVUG00000007271	SMARCAD1	92	65.361	Vulpes_vulpes
ENSORLG00020020569	smarcad1a	90	53.923	ENSXETG00000019214	smarcad1	100	54.141	Xenopus_tropicalis
ENSORLG00020020569	smarcad1a	82	78.993	ENSXCOG00000005232	smarcad1a	88	79.912	Xiphophorus_couchianus