EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020020570 (Gene tree)
Gene ID: -
Gene Symbol: sall1a
Alias: -
Full Name: spalt-like transcription factor 1a
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 9871 bases
Position: chr3:28552894-28562764
Accession: ZDB-GENE-020228-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020034186	zf-C2H2	PF00096.26	5.3e-34	1	7
ENSORLP00020034186	zf-C2H2	PF00096.26	5.3e-34	2	7
ENSORLP00020034186	zf-C2H2	PF00096.26	5.3e-34	3	7
ENSORLP00020034186	zf-C2H2	PF00096.26	5.3e-34	4	7
ENSORLP00020034186	zf-C2H2	PF00096.26	5.3e-34	5	7
ENSORLP00020034186	zf-C2H2	PF00096.26	5.3e-34	6	7
ENSORLP00020034186	zf-C2H2	PF00096.26	5.3e-34	7	7
ENSORLP00020034186	zf-met	PF12874.7	9.6e-24	1	5
ENSORLP00020034186	zf-met	PF12874.7	9.6e-24	2	5
ENSORLP00020034186	zf-met	PF12874.7	9.6e-24	3	5
ENSORLP00020034186	zf-met	PF12874.7	9.6e-24	4	5
ENSORLP00020034186	zf-met	PF12874.7	9.6e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020035229	-	3918	-	ENSORLP00020034186	1305 (aa)	-	-

Gene Model

Click here to download ENSORLG00020020570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020020570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020020570	sall1a	50	53.061	ENSORLG00020001912	znf236	71	53.061
ENSORLG00020020570	sall1a	56	50.000	ENSORLG00020002128	-	87	50.000
ENSORLG00020020570	sall1a	57	46.429	ENSORLG00020000219	-	88	46.429
ENSORLG00020020570	sall1a	52	45.714	ENSORLG00020009943	-	99	43.284
ENSORLG00020020570	sall1a	91	65.385	ENSORLG00020007339	sall4	95	65.385
ENSORLG00020020570	sall1a	96	57.692	ENSORLG00020015105	sall3b	95	57.692
ENSORLG00020020570	sall1a	97	45.206	ENSORLG00020001794	sall3a	99	45.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020020570	sall1a	99	67.812	ENSG00000103449	SALL1	100	67.737	Homo_sapiens
ENSORLG00020020570	sall1a	100	91.813	ENSAPOG00000022764	sall1a	100	91.813	Acanthochromis_polyacanthus
ENSORLG00020020570	sall1a	99	66.442	ENSAMEG00000006817	SALL1	100	66.642	Ailuropoda_melanoleuca
ENSORLG00020020570	sall1a	100	90.513	ENSACIG00000004231	sall1a	100	90.513	Amphilophus_citrinellus
ENSORLG00020020570	sall1a	100	92.196	ENSAOCG00000002800	sall1a	100	92.196	Amphiprion_ocellaris
ENSORLG00020020570	sall1a	100	91.890	ENSAPEG00000010179	sall1a	100	91.890	Amphiprion_percula
ENSORLG00020020570	sall1a	99	90.276	ENSATEG00000003006	sall1a	100	90.339	Anabas_testudineus
ENSORLG00020020570	sall1a	100	69.167	ENSAPLG00000003356	SALL1	100	69.219	Anas_platyrhynchos
ENSORLG00020020570	sall1a	99	67.020	ENSACAG00000014399	SALL1	97	66.995	Anolis_carolinensis
ENSORLG00020020570	sall1a	99	67.764	ENSANAG00000027238	SALL1	100	68.036	Aotus_nancymaae
ENSORLG00020020570	sall1a	100	90.819	ENSACLG00000017148	sall1a	100	90.819	Astatotilapia_calliptera
ENSORLG00020020570	sall1a	100	79.756	ENSAMXG00000018599	sall1a	100	80.061	Astyanax_mexicanus
ENSORLG00020020570	sall1a	99	51.141	ENSAMXG00000017702	sall1b	99	51.320	Astyanax_mexicanus
ENSORLG00020020570	sall1a	100	67.440	ENSBTAG00000008544	SALL1	100	67.566	Bos_taurus
ENSORLG00020020570	sall1a	99	68.063	ENSCJAG00000001740	SALL1	100	68.260	Callithrix_jacchus
ENSORLG00020020570	sall1a	99	66.816	ENSCAFG00000009755	SALL1	100	67.266	Canis_familiaris
ENSORLG00020020570	sall1a	99	66.816	ENSCAFG00020002842	SALL1	100	67.266	Canis_lupus_dingo
ENSORLG00020020570	sall1a	100	66.890	ENSCHIG00000026074	SALL1	100	67.089	Capra_hircus
ENSORLG00020020570	sall1a	99	67.788	ENSTSYG00000029464	SALL1	100	67.713	Carlito_syrichta
ENSORLG00020020570	sall1a	97	67.565	ENSCPOG00000006564	SALL1	99	67.488	Cavia_porcellus
ENSORLG00020020570	sall1a	99	65.744	ENSCCAG00000001639	SALL1	100	66.243	Cebus_capucinus
ENSORLG00020020570	sall1a	99	67.988	ENSCATG00000004982	SALL1	100	68.111	Cercocebus_atys
ENSORLG00020020570	sall1a	99	67.040	ENSCLAG00000006380	SALL1	100	66.741	Chinchilla_lanigera
ENSORLG00020020570	sall1a	99	67.390	ENSCSAG00000005319	SALL1	100	67.438	Chlorocebus_sabaeus
ENSORLG00020020570	sall1a	63	66.797	ENSCHOG00000000800	-	69	66.667	Choloepus_hoffmanni
ENSORLG00020020570	sall1a	100	68.741	ENSCPBG00000015924	SALL1	100	68.942	Chrysemys_picta_bellii
ENSORLG00020020570	sall1a	99	68.212	ENSCANG00000036664	SALL1	100	68.138	Colobus_angolensis_palliatus
ENSORLG00020020570	sall1a	99	66.393	ENSCGRG00001023314	-	100	66.692	Cricetulus_griseus_chok1gshd
ENSORLG00020020570	sall1a	98	66.337	ENSCGRG00000009496	Sall1	100	66.641	Cricetulus_griseus_crigri
ENSORLG00020020570	sall1a	99	88.015	ENSCSEG00000009349	sall1a	99	88.015	Cynoglossus_semilaevis
ENSORLG00020020570	sall1a	90	89.252	ENSCVAG00000020513	sall1a	99	89.252	Cyprinodon_variegatus
ENSORLG00020020570	sall1a	99	47.705	ENSDARG00000075891	sall1b	99	46.781	Danio_rerio
ENSORLG00020020570	sall1a	100	78.360	ENSDARG00000074319	sall1a	100	77.980	Danio_rerio
ENSORLG00020020570	sall1a	99	68.036	ENSDNOG00000016413	SALL1	100	68.036	Dasypus_novemcinctus
ENSORLG00020020570	sall1a	98	67.176	ENSETEG00000015150	SALL1	99	67.100	Echinops_telfairi
ENSORLG00020020570	sall1a	63	42.558	ENSEBUG00000008798	SALL1	94	36.537	Eptatretus_burgeri
ENSORLG00020020570	sall1a	90	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSORLG00020020570	sall1a	99	67.016	ENSEASG00005014602	SALL1	100	67.566	Equus_asinus_asinus
ENSORLG00020020570	sall1a	90	64.988	ENSECAG00000011334	SALL1	99	65.566	Equus_caballus
ENSORLG00020020570	sall1a	98	67.784	ENSEEUG00000002014	SALL1	100	67.658	Erinaceus_europaeus
ENSORLG00020020570	sall1a	100	54.370	ENSELUG00000017774	-	100	54.911	Esox_lucius
ENSORLG00020020570	sall1a	100	76.868	ENSELUG00000006159	sall1a	100	76.940	Esox_lucius
ENSORLG00020020570	sall1a	100	65.894	ENSFCAG00000024654	SALL1	100	66.417	Felis_catus
ENSORLG00020020570	sall1a	100	69.271	ENSFALG00000000074	SALL1	100	69.023	Ficedula_albicollis
ENSORLG00020020570	sall1a	100	90.436	ENSFHEG00000012579	sall1a	100	90.436	Fundulus_heteroclitus
ENSORLG00020020570	sall1a	79	65.854	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSORLG00020020570	sall1a	100	82.317	ENSGMOG00000006103	sall1a	100	82.317	Gadus_morhua
ENSORLG00020020570	sall1a	97	40.970	ENSGMOG00000013383	-	99	40.595	Gadus_morhua
ENSORLG00020020570	sall1a	100	69.595	ENSGALG00000039238	SALL1	100	69.444	Gallus_gallus
ENSORLG00020020570	sall1a	100	90.527	ENSGAFG00000009964	sall1a	100	90.527	Gambusia_affinis
ENSORLG00020020570	sall1a	99	88.591	ENSGACG00000016702	sall1a	99	88.591	Gasterosteus_aculeatus
ENSORLG00020020570	sall1a	100	68.816	ENSGAGG00000013979	SALL1	100	69.017	Gopherus_agassizii
ENSORLG00020020570	sall1a	99	68.036	ENSGGOG00000000663	SALL1	100	67.961	Gorilla_gorilla
ENSORLG00020020570	sall1a	100	90.742	ENSHBUG00000022005	sall1a	100	90.742	Haplochromis_burtoni
ENSORLG00020020570	sall1a	99	67.414	ENSHGLG00000004288	-	100	67.487	Heterocephalus_glaber_female
ENSORLG00020020570	sall1a	99	67.414	ENSHGLG00100017496	SALL1	100	67.487	Heterocephalus_glaber_male
ENSORLG00020020570	sall1a	100	83.359	ENSHCOG00000000974	sall1a	100	83.359	Hippocampus_comes
ENSORLG00020020570	sall1a	99	50.377	ENSIPUG00000022928	sall1b	99	50.151	Ictalurus_punctatus
ENSORLG00020020570	sall1a	100	78.995	ENSIPUG00000016265	SALL1	100	78.919	Ictalurus_punctatus
ENSORLG00020020570	sall1a	99	67.905	ENSSTOG00000020885	SALL1	100	68.128	Ictidomys_tridecemlineatus
ENSORLG00020020570	sall1a	100	90.972	ENSKMAG00000016681	sall1a	100	90.972	Kryptolebias_marmoratus
ENSORLG00020020570	sall1a	98	88.097	ENSLBEG00000012207	sall1a	95	88.097	Labrus_bergylta
ENSORLG00020020570	sall1a	100	68.473	ENSLACG00000003556	SALL1	100	68.698	Latimeria_chalumnae
ENSORLG00020020570	sall1a	100	77.098	ENSLOCG00000007283	sall1b	100	77.022	Lepisosteus_oculatus
ENSORLG00020020570	sall1a	98	67.378	ENSLAFG00000015251	SALL1	100	67.652	Loxodonta_africana
ENSORLG00020020570	sall1a	99	68.087	ENSMFAG00000003298	SALL1	100	68.111	Macaca_fascicularis
ENSORLG00020020570	sall1a	93	68.171	ENSMMUG00000017200	SALL1	99	68.196	Macaca_mulatta
ENSORLG00020020570	sall1a	93	68.196	ENSMNEG00000034770	SALL1	99	68.116	Macaca_nemestrina
ENSORLG00020020570	sall1a	99	68.212	ENSMLEG00000036406	SALL1	100	68.111	Mandrillus_leucophaeus
ENSORLG00020020570	sall1a	99	90.972	ENSMAMG00000004164	sall1a	99	91.082	Mastacembelus_armatus
ENSORLG00020020570	sall1a	100	90.819	ENSMZEG00005006479	sall1a	100	90.819	Maylandia_zebra
ENSORLG00020020570	sall1a	98	69.319	ENSMGAG00000004704	SALL1	100	69.166	Meleagris_gallopavo
ENSORLG00020020570	sall1a	100	66.493	ENSMAUG00000019093	Sall1	100	66.418	Mesocricetus_auratus
ENSORLG00020020570	sall1a	100	67.266	ENSMICG00000036486	SALL1	100	67.316	Microcebus_murinus
ENSORLG00020020570	sall1a	99	89.510	ENSMMOG00000016400	sall1a	99	89.510	Mola_mola
ENSORLG00020020570	sall1a	99	68.015	ENSMODG00000013114	SALL1	99	68.390	Monodelphis_domestica
ENSORLG00020020570	sall1a	99	90.199	ENSMALG00000013400	sall1a	99	90.199	Monopterus_albus
ENSORLG00020020570	sall1a	100	66.494	MGP_CAROLIEiJ_G0031362	Sall1	100	66.469	Mus_caroli
ENSORLG00020020570	sall1a	100	66.245	ENSMUSG00000031665	Sall1	100	66.321	Mus_musculus
ENSORLG00020020570	sall1a	99	66.247	MGP_PahariEiJ_G0022961	Sall1	100	66.074	Mus_pahari
ENSORLG00020020570	sall1a	99	66.295	MGP_SPRETEiJ_G0032480	Sall1	100	66.321	Mus_spretus
ENSORLG00020020570	sall1a	99	66.059	ENSMPUG00000003265	SALL1	96	66.185	Mustela_putorius_furo
ENSORLG00020020570	sall1a	97	65.214	ENSMLUG00000015541	SALL1	99	65.725	Myotis_lucifugus
ENSORLG00020020570	sall1a	100	90.972	ENSNBRG00000009307	sall1a	100	90.972	Neolamprologus_brichardi
ENSORLG00020020570	sall1a	93	81.564	ENSNLEG00000001008	SALL1	99	81.111	Nomascus_leucogenys
ENSORLG00020020570	sall1a	99	68.117	ENSMEUG00000012206	SALL1	99	68.271	Notamacropus_eugenii
ENSORLG00020020570	sall1a	86	72.500	ENSOPRG00000005645	SALL1	71	72.165	Ochotona_princeps
ENSORLG00020020570	sall1a	99	67.292	ENSODEG00000003685	SALL1	100	67.365	Octodon_degus
ENSORLG00020020570	sall1a	100	91.125	ENSONIG00000002831	sall1a	100	91.125	Oreochromis_niloticus
ENSORLG00020020570	sall1a	96	67.407	ENSOANG00000013399	SALL1	96	77.551	Ornithorhynchus_anatinus
ENSORLG00020020570	sall1a	100	99.770	ENSORLG00000013827	sall1a	100	99.831	Oryzias_latipes
ENSORLG00020020570	sall1a	100	99.464	ENSORLG00015018830	sall1a	100	99.493	Oryzias_latipes_hsok
ENSORLG00020020570	sall1a	100	97.246	ENSOMEG00000016043	sall1a	100	97.246	Oryzias_melastigma
ENSORLG00020020570	sall1a	100	67.812	ENSOGAG00000027316	SALL1	100	67.862	Otolemur_garnettii
ENSORLG00020020570	sall1a	100	63.426	ENSOARG00000017583	SALL1	100	63.217	Ovis_aries
ENSORLG00020020570	sall1a	98	68.012	ENSPPAG00000035657	SALL1	100	67.936	Pan_paniscus
ENSORLG00020020570	sall1a	99	50.151	ENSPPAG00000035136	-	99	50.529	Pan_paniscus
ENSORLG00020020570	sall1a	100	65.969	ENSPPRG00000023283	SALL1	100	66.694	Panthera_pardus
ENSORLG00020020570	sall1a	87	63.462	ENSPTIG00000013539	-	94	70.888	Panthera_tigris_altaica
ENSORLG00020020570	sall1a	98	50.345	ENSPTRG00000045256	-	99	50.730	Pan_troglodytes
ENSORLG00020020570	sall1a	99	67.838	ENSPTRG00000008108	SALL1	100	67.860	Pan_troglodytes
ENSORLG00020020570	sall1a	99	68.138	ENSPANG00000024176	SALL1	100	68.036	Papio_anubis
ENSORLG00020020570	sall1a	100	71.385	ENSPKIG00000022251	sall1a	100	71.537	Paramormyrops_kingsleyae
ENSORLG00020020570	sall1a	100	70.106	ENSPKIG00000005383	-	100	70.258	Paramormyrops_kingsleyae
ENSORLG00020020570	sall1a	100	69.196	ENSPSIG00000008582	SALL1	100	69.173	Pelodiscus_sinensis
ENSORLG00020020570	sall1a	99	83.233	ENSPMGG00000021788	sall1a	99	83.233	Periophthalmus_magnuspinnatus
ENSORLG00020020570	sall1a	99	68.165	ENSPCIG00000017840	SALL1	99	68.271	Phascolarctos_cinereus
ENSORLG00020020570	sall1a	98	90.365	ENSPFOG00000015799	sall1a	96	90.365	Poecilia_formosa
ENSORLG00020020570	sall1a	100	90.680	ENSPLAG00000022539	sall1a	100	90.680	Poecilia_latipinna
ENSORLG00020020570	sall1a	100	90.833	ENSPMEG00000020894	sall1a	100	90.833	Poecilia_mexicana
ENSORLG00020020570	sall1a	100	90.222	ENSPREG00000006802	sall1a	100	90.222	Poecilia_reticulata
ENSORLG00020020570	sall1a	90	66.890	ENSPPYG00000007345	SALL1	96	66.806	Pongo_abelii
ENSORLG00020020570	sall1a	85	69.193	ENSPCAG00000008162	SALL1	93	69.261	Procavia_capensis
ENSORLG00020020570	sall1a	100	67.041	ENSPCOG00000028192	SALL1	100	67.515	Propithecus_coquereli
ENSORLG00020020570	sall1a	67	69.746	ENSPVAG00000015374	SALL1	100	69.827	Pteropus_vampyrus
ENSORLG00020020570	sall1a	100	90.895	ENSPNYG00000010865	sall1a	100	90.895	Pundamilia_nyererei
ENSORLG00020020570	sall1a	100	77.795	ENSPNAG00000023644	sall1a	100	78.099	Pygocentrus_nattereri
ENSORLG00020020570	sall1a	72	65.306	ENSPNAG00000028248	-	67	65.306	Pygocentrus_nattereri
ENSORLG00020020570	sall1a	99	52.901	ENSPNAG00000007442	sall1b	99	53.092	Pygocentrus_nattereri
ENSORLG00020020570	sall1a	100	66.468	ENSRNOG00000013907	Sall1	100	66.692	Rattus_norvegicus
ENSORLG00020020570	sall1a	93	68.065	ENSRBIG00000015707	SALL1	99	67.923	Rhinopithecus_bieti
ENSORLG00020020570	sall1a	97	68.203	ENSRROG00000035777	SALL1	99	68.126	Rhinopithecus_roxellana
ENSORLG00020020570	sall1a	99	67.937	ENSSBOG00000032186	SALL1	100	68.111	Saimiri_boliviensis_boliviensis
ENSORLG00020020570	sall1a	99	68.069	ENSSHAG00000009477	SALL1	99	68.045	Sarcophilus_harrisii
ENSORLG00020020570	sall1a	100	72.508	ENSSFOG00015020020	sall1a	100	72.521	Scleropages_formosus
ENSORLG00020020570	sall1a	98	70.625	ENSSFOG00015001590	sall1a	99	70.625	Scleropages_formosus
ENSORLG00020020570	sall1a	99	90.735	ENSSMAG00000009160	sall1a	99	90.735	Scophthalmus_maximus
ENSORLG00020020570	sall1a	90	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSORLG00020020570	sall1a	99	92.343	ENSSDUG00000006507	sall1a	99	92.479	Seriola_dumerili
ENSORLG00020020570	sall1a	99	92.496	ENSSLDG00000017721	sall1a	99	92.496	Seriola_lalandi_dorsalis
ENSORLG00020020570	sall1a	57	69.792	ENSSLDG00000014465	-	86	69.792	Seriola_lalandi_dorsalis
ENSORLG00020020570	sall1a	97	67.280	ENSSARG00000000661	SALL1	99	67.433	Sorex_araneus
ENSORLG00020020570	sall1a	100	68.168	ENSSPUG00000000156	SALL1	100	68.445	Sphenodon_punctatus
ENSORLG00020020570	sall1a	100	92.813	ENSSPAG00000021615	sall1a	100	92.813	Stegastes_partitus
ENSORLG00020020570	sall1a	100	66.791	ENSSSCG00000002836	SALL1	100	66.841	Sus_scrofa
ENSORLG00020020570	sall1a	100	68.971	ENSTGUG00000007514	SALL1	100	68.820	Taeniopygia_guttata
ENSORLG00020020570	sall1a	91	86.109	ENSTRUG00000008950	sall1a	100	86.109	Takifugu_rubripes
ENSORLG00020020570	sall1a	92	84.750	ENSTNIG00000004257	sall1a	100	84.750	Tetraodon_nigroviridis
ENSORLG00020020570	sall1a	62	76.712	ENSTBEG00000002119	-	53	76.712	Tupaia_belangeri
ENSORLG00020020570	sall1a	90	65.520	ENSUAMG00000023379	-	92	65.581	Ursus_americanus
ENSORLG00020020570	sall1a	90	65.494	ENSVVUG00000019383	-	99	65.695	Vulpes_vulpes
ENSORLG00020020570	sall1a	97	34.504	ENSXETG00000017176	sall2	94	37.687	Xenopus_tropicalis
ENSORLG00020020570	sall1a	100	64.930	ENSXETG00000018417	sall1	100	65.004	Xenopus_tropicalis
ENSORLG00020020570	sall1a	100	90.680	ENSXMAG00000016273	sall1a	100	90.767	Xiphophorus_maculatus