EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020020665 (Gene tree)
Gene ID: -
Gene Symbol: chd9
Alias: -
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 65200 bases
Position: chr3:28040289-28105488
Accession: ZDB-GENE-030131-497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020019625	ResIII	PF04851.15	1e-05	1	1
ENSORLP00020019625	BRK	PF07533.16	9.4e-32	1	2
ENSORLP00020019625	BRK	PF07533.16	9.4e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020028782	-	8532	-	ENSORLP00020019625	2843 (aa)	-	-

Gene Model

Click here to download ENSORLG00020020665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020020665's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020020665	chd9	59	64.444	ENSORLG00020021891	chd6	95	75.502
ENSORLG00020020665	chd9	60	69.492	ENSORLG00020020002	chd7	59	69.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020020665	chd9	75	62.995	ENSG00000177200	CHD9	91	76.699	Homo_sapiens
ENSORLG00020020665	chd9	98	79.625	ENSAPOG00000023034	chd9	97	83.189	Acanthochromis_polyacanthus
ENSORLG00020020665	chd9	98	78.439	ENSACIG00000004097	chd9	96	78.579	Amphilophus_citrinellus
ENSORLG00020020665	chd9	98	80.492	ENSAOCG00000005487	chd9	97	83.292	Amphiprion_ocellaris
ENSORLG00020020665	chd9	95	81.374	ENSAPEG00000009859	chd9	97	83.189	Amphiprion_percula
ENSORLG00020020665	chd9	90	82.510	ENSATEG00000002748	chd9	93	82.469	Anabas_testudineus
ENSORLG00020020665	chd9	97	63.703	ENSACAG00000016150	CHD9	96	61.847	Anolis_carolinensis
ENSORLG00020020665	chd9	75	62.960	ENSANAG00000015630	CHD9	92	73.022	Aotus_nancymaae
ENSORLG00020020665	chd9	98	78.097	ENSACLG00000016899	chd9	98	77.966	Astatotilapia_calliptera
ENSORLG00020020665	chd9	93	68.345	ENSAMXG00000005652	chd9	97	75.535	Astyanax_mexicanus
ENSORLG00020020665	chd9	75	62.914	ENSCJAG00000001573	CHD9	92	73.381	Callithrix_jacchus
ENSORLG00020020665	chd9	75	63.113	ENSCAFG00000009699	CHD9	79	70.762	Canis_familiaris
ENSORLG00020020665	chd9	75	63.113	ENSCAFG00020002879	CHD9	91	73.646	Canis_lupus_dingo
ENSORLG00020020665	chd9	75	63.297	ENSTSYG00000007693	CHD9	92	73.285	Carlito_syrichta
ENSORLG00020020665	chd9	70	55.846	ENSCAPG00000011604	CHD9	65	60.288	Cavia_aperea
ENSORLG00020020665	chd9	75	59.655	ENSCPOG00000036544	CHD9	84	66.040	Cavia_porcellus
ENSORLG00020020665	chd9	75	63.323	ENSCCAG00000036178	CHD9	92	73.646	Cebus_capucinus
ENSORLG00020020665	chd9	75	63.052	ENSCATG00000036753	CHD9	92	72.792	Cercocebus_atys
ENSORLG00020020665	chd9	75	63.108	ENSCLAG00000007137	CHD9	95	78.998	Chinchilla_lanigera
ENSORLG00020020665	chd9	75	63.086	ENSCSAG00000005311	CHD9	79	70.543	Chlorocebus_sabaeus
ENSORLG00020020665	chd9	69	82.692	ENSCHOG00000003935	CHD9	57	92.105	Choloepus_hoffmanni
ENSORLG00020020665	chd9	89	83.019	ENSCPBG00000012459	CHD9	93	80.696	Chrysemys_picta_bellii
ENSORLG00020020665	chd9	75	63.189	ENSCANG00000030349	CHD9	92	73.477	Colobus_angolensis_palliatus
ENSORLG00020020665	chd9	96	61.898	ENSCGRG00001016150	Chd9	84	70.555	Cricetulus_griseus_chok1gshd
ENSORLG00020020665	chd9	96	61.898	ENSCGRG00000012850	Chd9	93	80.755	Cricetulus_griseus_crigri
ENSORLG00020020665	chd9	97	76.129	ENSCSEG00000009209	chd9	95	80.000	Cynoglossus_semilaevis
ENSORLG00020020665	chd9	80	75.553	ENSDARG00000074498	chd9	91	78.451	Danio_rerio
ENSORLG00020020665	chd9	56	76.149	ENSDNOG00000006045	CHD9	97	70.273	Dasypus_novemcinctus
ENSORLG00020020665	chd9	66	70.087	ENSDORG00000008523	-	96	70.654	Dipodomys_ordii
ENSORLG00020020665	chd9	66	91.270	ENSETEG00000009565	CHD9	85	90.984	Echinops_telfairi
ENSORLG00020020665	chd9	87	78.873	ENSEASG00005014832	CHD9	94	80.956	Equus_asinus_asinus
ENSORLG00020020665	chd9	75	63.220	ENSECAG00000011505	CHD9	93	68.851	Equus_caballus
ENSORLG00020020665	chd9	60	86.784	ENSEEUG00000014515	CHD9	75	83.978	Erinaceus_europaeus
ENSORLG00020020665	chd9	75	81.829	ENSELUG00000006031	chd9	90	78.041	Esox_lucius
ENSORLG00020020665	chd9	75	63.129	ENSFCAG00000022534	CHD9	92	74.007	Felis_catus
ENSORLG00020020665	chd9	80	69.602	ENSFALG00000013276	CHD9	66	75.669	Ficedula_albicollis
ENSORLG00020020665	chd9	96	80.928	ENSFHEG00000006068	chd9	96	85.775	Fundulus_heteroclitus
ENSORLG00020020665	chd9	68	85.394	ENSGMOG00000006040	chd9	81	83.685	Gadus_morhua
ENSORLG00020020665	chd9	95	63.727	ENSGALG00000039178	CHD9	93	72.301	Gallus_gallus
ENSORLG00020020665	chd9	99	77.045	ENSGAFG00000010014	chd9	97	82.957	Gambusia_affinis
ENSORLG00020020665	chd9	77	82.524	ENSGACG00000016694	chd9	95	86.142	Gasterosteus_aculeatus
ENSORLG00020020665	chd9	75	63.239	ENSGGOG00000014816	CHD9	92	73.118	Gorilla_gorilla
ENSORLG00020020665	chd9	98	78.853	ENSHBUG00000023322	chd9	97	84.552	Haplochromis_burtoni
ENSORLG00020020665	chd9	99	60.215	ENSHGLG00000014938	CHD9	95	78.998	Heterocephalus_glaber_female
ENSORLG00020020665	chd9	96	74.549	ENSHCOG00000000937	chd9	96	78.987	Hippocampus_comes
ENSORLG00020020665	chd9	82	76.881	ENSIPUG00000016448	chd9	96	77.934	Ictalurus_punctatus
ENSORLG00020020665	chd9	96	61.331	ENSSTOG00000022273	CHD9	94	78.954	Ictidomys_tridecemlineatus
ENSORLG00020020665	chd9	96	78.507	ENSKMAG00000016784	chd9	97	83.532	Kryptolebias_marmoratus
ENSORLG00020020665	chd9	91	79.357	ENSLBEG00000012077	chd9	96	83.243	Labrus_bergylta
ENSORLG00020020665	chd9	96	58.840	ENSLACG00000005557	CHD9	77	66.623	Latimeria_chalumnae
ENSORLG00020020665	chd9	88	72.468	ENSLOCG00000007225	chd9	91	76.838	Lepisosteus_oculatus
ENSORLG00020020665	chd9	75	63.041	ENSMFAG00000041354	CHD9	92	73.477	Macaca_fascicularis
ENSORLG00020020665	chd9	75	63.041	ENSMMUG00000016310	CHD9	92	73.477	Macaca_mulatta
ENSORLG00020020665	chd9	75	63.132	ENSMLEG00000043219	CHD9	92	73.477	Mandrillus_leucophaeus
ENSORLG00020020665	chd9	96	79.443	ENSMAMG00000003909	chd9	97	78.212	Mastacembelus_armatus
ENSORLG00020020665	chd9	98	76.975	ENSMZEG00005006581	chd9	97	84.434	Maylandia_zebra
ENSORLG00020020665	chd9	92	60.138	ENSMGAG00000004642	CHD9	59	72.151	Meleagris_gallopavo
ENSORLG00020020665	chd9	75	63.227	ENSMICG00000016679	CHD9	92	73.646	Microcebus_murinus
ENSORLG00020020665	chd9	96	78.026	ENSMMOG00000016406	chd9	97	78.498	Mola_mola
ENSORLG00020020665	chd9	73	64.479	ENSMODG00000013142	-	96	78.009	Monodelphis_domestica
ENSORLG00020020665	chd9	97	80.449	ENSMALG00000013306	chd9	98	78.955	Monopterus_albus
ENSORLG00020020665	chd9	99	60.291	ENSMUSG00000056608	Chd9	94	79.805	Mus_musculus
ENSORLG00020020665	chd9	96	61.001	MGP_PahariEiJ_G0022964	Chd9	93	69.214	Mus_pahari
ENSORLG00020020665	chd9	98	78.510	ENSNBRG00000009423	chd9	97	82.391	Neolamprologus_brichardi
ENSORLG00020020665	chd9	66	95.489	ENSMEUG00000008222	-	74	87.261	Notamacropus_eugenii
ENSORLG00020020665	chd9	56	95.489	ENSOPRG00000011168	CHD9	79	85.634	Ochotona_princeps
ENSORLG00020020665	chd9	99	60.583	ENSODEG00000004466	CHD9	97	61.090	Octodon_degus
ENSORLG00020020665	chd9	81	83.988	ENSONIG00000002816	chd9	96	84.789	Oreochromis_niloticus
ENSORLG00020020665	chd9	83	67.722	ENSOCUG00000001016	CHD9	94	70.749	Oryctolagus_cuniculus
ENSORLG00020020665	chd9	99	90.809	ENSORLG00000013810	chd9	99	94.578	Oryzias_latipes
ENSORLG00020020665	chd9	99	90.930	ENSORLG00015019126	chd9	99	94.556	Oryzias_latipes_hsok
ENSORLG00020020665	chd9	65	92.316	ENSOMEG00000015978	chd9	99	91.994	Oryzias_melastigma
ENSORLG00020020665	chd9	58	74.114	ENSPPAG00000039388	-	96	69.970	Pan_paniscus
ENSORLG00020020665	chd9	75	63.084	ENSPPRG00000004801	CHD9	92	73.646	Panthera_pardus
ENSORLG00020020665	chd9	75	61.859	ENSPTIG00000021854	CHD9	92	64.260	Panthera_tigris_altaica
ENSORLG00020020665	chd9	75	62.949	ENSPTRG00000008113	CHD9	92	73.118	Pan_troglodytes
ENSORLG00020020665	chd9	75	63.086	ENSPANG00000019307	CHD9	95	70.573	Papio_anubis
ENSORLG00020020665	chd9	95	64.281	ENSPKIG00000025401	-	79	70.921	Paramormyrops_kingsleyae
ENSORLG00020020665	chd9	96	66.783	ENSPKIG00000021876	chd9	96	75.179	Paramormyrops_kingsleyae
ENSORLG00020020665	chd9	65	63.675	ENSPSIG00000008099	CHD9	92	78.284	Pelodiscus_sinensis
ENSORLG00020020665	chd9	89	62.596	ENSPCIG00000017215	CHD9	92	76.558	Phascolarctos_cinereus
ENSORLG00020020665	chd9	99	77.737	ENSPFOG00000015839	chd9	98	77.785	Poecilia_formosa
ENSORLG00020020665	chd9	99	77.685	ENSPLAG00000011118	chd9	97	84.158	Poecilia_latipinna
ENSORLG00020020665	chd9	99	78.865	ENSPMEG00000015106	chd9	98	79.040	Poecilia_mexicana
ENSORLG00020020665	chd9	97	79.666	ENSPREG00000006473	chd9	97	83.004	Poecilia_reticulata
ENSORLG00020020665	chd9	72	78.539	ENSPCAG00000007564	CHD9	83	80.377	Procavia_capensis
ENSORLG00020020665	chd9	75	61.343	ENSPCOG00000028433	CHD9	92	72.924	Propithecus_coquereli
ENSORLG00020020665	chd9	84	58.228	ENSPVAG00000015617	CHD9	81	73.083	Pteropus_vampyrus
ENSORLG00020020665	chd9	98	78.288	ENSPNYG00000010947	chd9	97	83.251	Pundamilia_nyererei
ENSORLG00020020665	chd9	97	69.168	ENSPNAG00000024141	chd9	97	76.275	Pygocentrus_nattereri
ENSORLG00020020665	chd9	90	60.142	ENSRNOG00000049302	Chd9	91	80.283	Rattus_norvegicus
ENSORLG00020020665	chd9	58	74.835	ENSRBIG00000035553	CHD9	95	70.573	Rhinopithecus_bieti
ENSORLG00020020665	chd9	57	76.071	ENSRROG00000033278	CHD9	92	73.477	Rhinopithecus_roxellana
ENSORLG00020020665	chd9	75	62.902	ENSSBOG00000030240	CHD9	92	73.381	Saimiri_boliviensis_boliviensis
ENSORLG00020020665	chd9	99	60.838	ENSSHAG00000002719	CHD9	79	69.906	Sarcophilus_harrisii
ENSORLG00020020665	chd9	96	67.662	ENSSFOG00015020209	chd9	92	77.714	Scleropages_formosus
ENSORLG00020020665	chd9	91	79.738	ENSSMAG00000008953	chd9	96	83.561	Scophthalmus_maximus
ENSORLG00020020665	chd9	95	81.712	ENSSDUG00000006139	chd9	97	83.506	Seriola_dumerili
ENSORLG00020020665	chd9	98	80.326	ENSSLDG00000017818	chd9	97	83.545	Seriola_lalandi_dorsalis
ENSORLG00020020665	chd9	72	78.638	ENSSARG00000010632	CHD9	54	78.469	Sorex_araneus
ENSORLG00020020665	chd9	95	80.112	ENSSPAG00000021649	chd9	97	83.395	Stegastes_partitus
ENSORLG00020020665	chd9	99	60.087	ENSSSCG00000033591	CHD9	70	75.534	Sus_scrofa
ENSORLG00020020665	chd9	90	63.101	ENSTGUG00000007476	CHD9	95	72.032	Taeniopygia_guttata
ENSORLG00020020665	chd9	95	78.499	ENSTRUG00000009125	chd9	97	77.629	Takifugu_rubripes
ENSORLG00020020665	chd9	57	86.124	ENSTNIG00000003825	chd9	86	86.124	Tetraodon_nigroviridis
ENSORLG00020020665	chd9	52	94.915	ENSTBEG00000016052	-	63	94.545	Tupaia_belangeri
ENSORLG00020020665	chd9	87	62.710	ENSTTRG00000012674	CHD9	85	71.125	Tursiops_truncatus
ENSORLG00020020665	chd9	65	86.450	ENSUMAG00000004043	CHD9	93	86.450	Ursus_maritimus
ENSORLG00020020665	chd9	72	76.829	ENSVPAG00000001374	CHD9	82	69.692	Vicugna_pacos
ENSORLG00020020665	chd9	75	63.067	ENSVVUG00000019435	CHD9	79	70.719	Vulpes_vulpes
ENSORLG00020020665	chd9	99	59.154	ENSXETG00000000349	chd9	77	74.462	Xenopus_tropicalis
ENSORLG00020020665	chd9	80	85.973	ENSXCOG00000012997	chd9	97	84.846	Xiphophorus_couchianus
ENSORLG00020020665	chd9	97	78.999	ENSXMAG00000016192	chd9	98	83.612	Xiphophorus_maculatus