EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020020676 (Gene tree)
Gene ID: -
Gene Symbol: ptcd3
Alias: -
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 9432 bases
Position: chr10:22978005-22987436
Accession: 101157067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020019667	PPR	PF01535.20	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020028843	-	2169	XM_004073549	ENSORLP00020019667	671 (aa)	XP_004073597	-

Gene Model

Click here to download ENSORLG00020020676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020020676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020020676	ptcd3	89	75.490	ENSACIG00000022263	ptcd3	100	75.490	Amphilophus_citrinellus
ENSORLG00020020676	ptcd3	98	71.472	ENSAOCG00000017186	ptcd3	97	71.472	Amphiprion_ocellaris
ENSORLG00020020676	ptcd3	98	71.558	ENSAPEG00000016069	ptcd3	97	71.168	Amphiprion_percula
ENSORLG00020020676	ptcd3	87	46.880	ENSAPLG00000005086	PTCD3	97	46.880	Anas_platyrhynchos
ENSORLG00020020676	ptcd3	99	78.797	ENSACLG00000020653	ptcd3	99	78.012	Astatotilapia_calliptera
ENSORLG00020020676	ptcd3	99	56.757	ENSAMXG00000011570	ptcd3	99	56.156	Astyanax_mexicanus
ENSORLG00020020676	ptcd3	97	76.300	ENSCVAG00000020820	ptcd3	98	77.500	Cyprinodon_variegatus
ENSORLG00020020676	ptcd3	84	70.899	ENSGAFG00000015291	ptcd3	94	70.547	Gambusia_affinis
ENSORLG00020020676	ptcd3	99	79.098	ENSHBUG00000020056	ptcd3	99	78.313	Haplochromis_burtoni
ENSORLG00020020676	ptcd3	99	70.871	ENSLBEG00000015349	ptcd3	99	70.420	Labrus_bergylta
ENSORLG00020020676	ptcd3	99	78.947	ENSMZEG00005004980	ptcd3	99	78.163	Maylandia_zebra
ENSORLG00020020676	ptcd3	90	45.292	ENSMGAG00000013124	PTCD3	99	45.177	Meleagris_gallopavo
ENSORLG00020020676	ptcd3	99	71.664	ENSMALG00000013282	ptcd3	99	71.214	Monopterus_albus
ENSORLG00020020676	ptcd3	89	74.329	ENSNBRG00000000447	ptcd3	100	74.329	Neolamprologus_brichardi
ENSORLG00020020676	ptcd3	99	79.098	ENSONIG00000015886	ptcd3	99	78.313	Oreochromis_niloticus
ENSORLG00020020676	ptcd3	100	98.659	ENSORLG00000008776	ptcd3	100	98.769	Oryzias_latipes
ENSORLG00020020676	ptcd3	86	76.795	ENSORLG00015015978	ptcd3	99	76.962	Oryzias_latipes_hsok
ENSORLG00020020676	ptcd3	97	72.197	ENSPFOG00000004442	ptcd3	100	71.889	Poecilia_formosa
ENSORLG00020020676	ptcd3	89	72.480	ENSPLAG00000021401	ptcd3	100	72.480	Poecilia_latipinna
ENSORLG00020020676	ptcd3	87	70.648	ENSPMEG00000007153	ptcd3	100	70.648	Poecilia_mexicana
ENSORLG00020020676	ptcd3	99	54.772	ENSSFOG00015019643	ptcd3	97	55.987	Scleropages_formosus
ENSORLG00020020676	ptcd3	79	51.750	ENSTGUG00000010760	PTCD3	100	51.206	Taeniopygia_guttata
ENSORLG00020020676	ptcd3	99	63.609	ENSTRUG00000003939	ptcd3	99	64.012	Takifugu_rubripes