EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020020817 (Gene tree)
Gene ID: -
Gene Symbol: npm1a
Alias: -
Full Name: nucleophosmin 1a
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 6271 bases
Position: chr14:17112351-17118621
Accession: ZDB-GENE-021028-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020034362	Nucleoplasmin	PF03066.15	5.5e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020029038	-	2180	-	ENSORLP00020034362	291 (aa)	-	-

Gene Model

Click here to download ENSORLG00020020817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020020817's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020020817	npm1a	100	73.090	ENSAPOG00000002813	npm1a	100	73.422	Acanthochromis_polyacanthus
ENSORLG00020020817	npm1a	94	70.758	ENSACIG00000014201	npm1a	100	71.119	Amphilophus_citrinellus
ENSORLG00020020817	npm1a	89	67.954	ENSAOCG00000004978	npm1a	100	66.795	Amphiprion_ocellaris
ENSORLG00020020817	npm1a	100	73.490	ENSAPEG00000008594	npm1a	100	73.154	Amphiprion_percula
ENSORLG00020020817	npm1a	99	76.721	ENSATEG00000008885	npm1a	99	76.721	Anabas_testudineus
ENSORLG00020020817	npm1a	97	67.138	ENSACLG00000008376	npm1a	96	67.491	Astatotilapia_calliptera
ENSORLG00020020817	npm1a	99	53.310	ENSAMXG00000010155	npm1a	99	56.552	Astyanax_mexicanus
ENSORLG00020020817	npm1a	100	58.763	ENSCSEG00000011165	npm1a	96	79.739	Cynoglossus_semilaevis
ENSORLG00020020817	npm1a	100	71.477	ENSCVAG00000008960	npm1a	100	70.805	Cyprinodon_variegatus
ENSORLG00020020817	npm1a	98	63.763	ENSDARG00000014329	npm1a	95	69.935	Danio_rerio
ENSORLG00020020817	npm1a	95	33.125	ENSEBUG00000012753	npm1a	91	34.062	Eptatretus_burgeri
ENSORLG00020020817	npm1a	100	68.367	ENSELUG00000013705	npm1a	100	68.027	Esox_lucius
ENSORLG00020020817	npm1a	100	72.185	ENSFHEG00000012496	npm1a	100	72.848	Fundulus_heteroclitus
ENSORLG00020020817	npm1a	100	68.317	ENSGAFG00000013059	npm1a	100	67.987	Gambusia_affinis
ENSORLG00020020817	npm1a	99	66.090	ENSGACG00000020319	npm1a	99	64.360	Gasterosteus_aculeatus
ENSORLG00020020817	npm1a	99	68.038	ENSHBUG00000000776	npm1a	100	68.354	Haplochromis_burtoni
ENSORLG00020020817	npm1a	100	53.618	ENSHCOG00000001059	npm1a	98	54.667	Hippocampus_comes
ENSORLG00020020817	npm1a	98	58.108	ENSIPUG00000019452	npm1	99	57.770	Ictalurus_punctatus
ENSORLG00020020817	npm1a	100	74.150	ENSKMAG00000010709	npm1a	100	74.490	Kryptolebias_marmoratus
ENSORLG00020020817	npm1a	100	71.906	ENSLBEG00000008793	npm1a	100	71.906	Labrus_bergylta
ENSORLG00020020817	npm1a	85	57.678	ENSLOCG00000009683	npm1a	100	56.506	Lepisosteus_oculatus
ENSORLG00020020817	npm1a	100	73.986	ENSMAMG00000009344	npm1a	83	73.311	Mastacembelus_armatus
ENSORLG00020020817	npm1a	99	67.834	ENSMZEG00005013717	npm1a	100	67.834	Maylandia_zebra
ENSORLG00020020817	npm1a	95	72.924	ENSMMOG00000007980	npm1a	100	72.924	Mola_mola
ENSORLG00020020817	npm1a	100	71.429	ENSMALG00000001146	npm1a	100	73.090	Monopterus_albus
ENSORLG00020020817	npm1a	99	64.984	ENSNBRG00000013172	npm1a	100	64.353	Neolamprologus_brichardi
ENSORLG00020020817	npm1a	99	68.874	ENSONIG00000001860	npm1a	99	68.543	Oreochromis_niloticus
ENSORLG00020020817	npm1a	100	98.288	ENSORLG00000010179	npm1a	100	98.288	Oryzias_latipes
ENSORLG00020020817	npm1a	100	98.630	ENSORLG00015003439	npm1a	100	98.630	Oryzias_latipes_hsok
ENSORLG00020020817	npm1a	100	87.372	ENSOMEG00000007083	npm1a	100	86.689	Oryzias_melastigma
ENSORLG00020020817	npm1a	100	54.754	ENSPKIG00000023943	npm1a	100	55.082	Paramormyrops_kingsleyae
ENSORLG00020020817	npm1a	100	54.795	ENSPMGG00000011716	npm1a	100	54.795	Periophthalmus_magnuspinnatus
ENSORLG00020020817	npm1a	100	67.667	ENSPFOG00000019173	npm1a	100	68.333	Poecilia_formosa
ENSORLG00020020817	npm1a	100	68.543	ENSPLAG00000001093	npm1a	100	68.212	Poecilia_latipinna
ENSORLG00020020817	npm1a	100	67.667	ENSPMEG00000012523	npm1a	100	68.333	Poecilia_mexicana
ENSORLG00020020817	npm1a	100	68.333	ENSPREG00000001647	npm1a	100	67.667	Poecilia_reticulata
ENSORLG00020020817	npm1a	99	68.489	ENSPNYG00000019321	npm1a	100	70.096	Pundamilia_nyererei
ENSORLG00020020817	npm1a	99	57.627	ENSPNAG00000026891	npm1a	99	58.844	Pygocentrus_nattereri
ENSORLG00020020817	npm1a	100	61.486	ENSSFOG00015007074	npm1a	100	61.486	Scleropages_formosus
ENSORLG00020020817	npm1a	100	75.676	ENSSMAG00000019090	npm1a	100	75.338	Scophthalmus_maximus
ENSORLG00020020817	npm1a	100	74.832	ENSSDUG00000015609	npm1a	100	75.503	Seriola_dumerili
ENSORLG00020020817	npm1a	100	75.084	ENSSLDG00000017849	npm1a	100	75.421	Seriola_lalandi_dorsalis
ENSORLG00020020817	npm1a	100	62.671	ENSSPAG00000021660	npm1a	100	54.452	Stegastes_partitus
ENSORLG00020020817	npm1a	100	71.854	ENSTRUG00000024003	npm1a	100	71.854	Takifugu_rubripes
ENSORLG00020020817	npm1a	100	68.027	ENSTNIG00000010773	npm1a	100	68.367	Tetraodon_nigroviridis
ENSORLG00020020817	npm1a	99	62.799	ENSXCOG00000005958	npm1a	100	67.606	Xiphophorus_couchianus
ENSORLG00020020817	npm1a	100	69.737	ENSXMAG00000000396	npm1a	100	69.079	Xiphophorus_maculatus