EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020020940 (Gene tree)
Gene ID: -
Gene Symbol: LARP4B
Alias: -
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 47897 bases
Position: chr17:6854523-6902419
Accession: 28987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020019949	La	PF05383.17	1.5e-13	1	1
ENSORLP00020019960	La	PF05383.17	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020029209	LARP4B-201	4205	-	ENSORLP00020019949	703 (aa)	-	-
ENSORLT00020029217	LARP4B-202	4379	-	ENSORLP00020019960	761 (aa)	-	-

Gene Model

Click here to download ENSORLG00020020940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020020940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020020940	LARP4B	84	37.316	ENSORLG00020010258	larp4aa	80	38.037

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020020940	LARP4B	100	54.250	ENSG00000107929	LARP4B	100	54.125	Homo_sapiens
ENSORLG00020020940	LARP4B	100	75.034	ENSAPOG00000020531	LARP4B	95	87.120	Acanthochromis_polyacanthus
ENSORLG00020020940	LARP4B	92	54.247	ENSAMEG00000001810	LARP4B	100	52.809	Ailuropoda_melanoleuca
ENSORLG00020020940	LARP4B	98	71.060	ENSAOCG00000007887	-	99	86.762	Amphiprion_ocellaris
ENSORLG00020020940	LARP4B	93	83.404	ENSAPEG00000002512	LARP4B	96	81.486	Amphiprion_percula
ENSORLG00020020940	LARP4B	100	82.391	ENSATEG00000012614	LARP4B	100	82.391	Anabas_testudineus
ENSORLG00020020940	LARP4B	100	58.302	ENSAPLG00000003813	LARP4B	98	58.177	Anas_platyrhynchos
ENSORLG00020020940	LARP4B	100	59.056	ENSACAG00000002858	LARP4B	100	58.929	Anolis_carolinensis
ENSORLG00020020940	LARP4B	100	54.000	ENSANAG00000007531	-	100	53.875	Aotus_nancymaae
ENSORLG00020020940	LARP4B	100	83.565	ENSACLG00000026356	LARP4B	100	83.705	Astatotilapia_calliptera
ENSORLG00020020940	LARP4B	94	53.235	ENSAMXG00000003335	larp4b	96	52.695	Astyanax_mexicanus
ENSORLG00020020940	LARP4B	97	55.316	ENSBTAG00000013899	LARP4B	97	55.316	Bos_taurus
ENSORLG00020020940	LARP4B	100	54.257	ENSCJAG00000018434	LARP4B	100	54.130	Callithrix_jacchus
ENSORLG00020020940	LARP4B	92	55.158	ENSCAFG00020004209	LARP4B	100	53.567	Canis_lupus_dingo
ENSORLG00020020940	LARP4B	97	54.128	ENSCHIG00000013543	LARP4B	98	54.128	Capra_hircus
ENSORLG00020020940	LARP4B	88	59.494	ENSTSYG00000002568	LARP4B	99	59.652	Carlito_syrichta
ENSORLG00020020940	LARP4B	88	55.134	ENSCAPG00000009725	LARP4B	84	53.823	Cavia_aperea
ENSORLG00020020940	LARP4B	100	54.511	ENSCPOG00000009375	LARP4B	100	54.511	Cavia_porcellus
ENSORLG00020020940	LARP4B	100	54.125	ENSCCAG00000024869	LARP4B	100	54.000	Cebus_capucinus
ENSORLG00020020940	LARP4B	100	54.625	ENSCATG00000019750	LARP4B	100	54.500	Cercocebus_atys
ENSORLG00020020940	LARP4B	100	54.818	ENSCLAG00000011570	LARP4B	100	54.948	Chinchilla_lanigera
ENSORLG00020020940	LARP4B	64	75.758	ENSCHOG00000007831	-	59	75.758	Choloepus_hoffmanni
ENSORLG00020020940	LARP4B	100	59.231	ENSCPBG00000017063	LARP4B	100	59.359	Chrysemys_picta_bellii
ENSORLG00020020940	LARP4B	100	52.750	ENSCANG00000038021	LARP4B	100	52.625	Colobus_angolensis_palliatus
ENSORLG00020020940	LARP4B	100	53.708	ENSCGRG00001022930	Larp4b	100	53.581	Cricetulus_griseus_chok1gshd
ENSORLG00020020940	LARP4B	100	53.708	ENSCGRG00000006022	Larp4b	100	53.581	Cricetulus_griseus_crigri
ENSORLG00020020940	LARP4B	100	72.184	ENSCSEG00000007342	LARP4B	100	72.184	Cynoglossus_semilaevis
ENSORLG00020020940	LARP4B	100	81.487	ENSCVAG00000008910	LARP4B	100	82.394	Cyprinodon_variegatus
ENSORLG00020020940	LARP4B	97	52.016	ENSDARG00000062146	larp4b	98	52.381	Danio_rerio
ENSORLG00020020940	LARP4B	96	54.620	ENSDNOG00000045543	-	100	60.437	Dasypus_novemcinctus
ENSORLG00020020940	LARP4B	100	51.940	ENSDORG00000009328	Larp4b	100	51.815	Dipodomys_ordii
ENSORLG00020020940	LARP4B	88	57.265	ENSETEG00000011249	LARP4B	90	57.771	Echinops_telfairi
ENSORLG00020020940	LARP4B	92	54.852	ENSEASG00005019068	-	100	53.375	Equus_asinus_asinus
ENSORLG00020020940	LARP4B	92	55.256	ENSECAG00000024040	LARP4B	100	53.750	Equus_caballus
ENSORLG00020020940	LARP4B	90	54.798	ENSEEUG00000008391	LARP4B	98	52.875	Erinaceus_europaeus
ENSORLG00020020940	LARP4B	100	70.051	ENSELUG00000008626	LARP4B	100	70.051	Esox_lucius
ENSORLG00020020940	LARP4B	88	41.898	ENSELUG00000001417	-	94	42.618	Esox_lucius
ENSORLG00020020940	LARP4B	90	56.606	ENSFCAG00000000721	-	100	53.741	Felis_catus
ENSORLG00020020940	LARP4B	100	59.949	ENSFALG00000006961	LARP4B	100	59.512	Ficedula_albicollis
ENSORLG00020020940	LARP4B	100	54.488	ENSFDAG00000006158	LARP4B	97	54.364	Fukomys_damarensis
ENSORLG00020020940	LARP4B	100	66.579	ENSFHEG00000013037	LARP4B	100	66.711	Fundulus_heteroclitus
ENSORLG00020020940	LARP4B	78	75.591	ENSGMOG00000010818	-	83	76.115	Gadus_morhua
ENSORLG00020020940	LARP4B	100	58.748	ENSGALG00000006672	LARP4B	100	58.365	Gallus_gallus
ENSORLG00020020940	LARP4B	100	72.559	ENSGACG00000017535	LARP4B	98	72.806	Gasterosteus_aculeatus
ENSORLG00020020940	LARP4B	94	57.781	ENSGAGG00000008598	LARP4B	100	57.645	Gopherus_agassizii
ENSORLG00020020940	LARP4B	100	54.125	ENSGGOG00000003572	LARP4B	100	54.000	Gorilla_gorilla
ENSORLG00020020940	LARP4B	100	84.669	ENSHBUG00000007535	LARP4B	100	84.951	Haplochromis_burtoni
ENSORLG00020020940	LARP4B	100	55.133	ENSHGLG00000012936	LARP4B	100	55.089	Heterocephalus_glaber_female
ENSORLG00020020940	LARP4B	100	55.013	ENSHGLG00100016220	-	100	54.887	Heterocephalus_glaber_male
ENSORLG00020020940	LARP4B	85	50.077	ENSHGLG00100017261	-	100	49.616	Heterocephalus_glaber_male
ENSORLG00020020940	LARP4B	99	68.603	ENSHCOG00000011581	LARP4B	89	68.603	Hippocampus_comes
ENSORLG00020020940	LARP4B	94	52.568	ENSIPUG00000009705	larp4b	97	52.162	Ictalurus_punctatus
ENSORLG00020020940	LARP4B	100	53.121	ENSSTOG00000000587	LARP4B	100	52.994	Ictidomys_tridecemlineatus
ENSORLG00020020940	LARP4B	100	54.130	ENSJJAG00000020847	Larp4b	100	54.003	Jaculus_jaculus
ENSORLG00020020940	LARP4B	100	84.265	ENSKMAG00000021674	LARP4B	100	84.951	Kryptolebias_marmoratus
ENSORLG00020020940	LARP4B	80	82.665	ENSLBEG00000025293	-	85	82.825	Labrus_bergylta
ENSORLG00020020940	LARP4B	94	57.592	ENSLACG00000009492	LARP4B	100	57.729	Latimeria_chalumnae
ENSORLG00020020940	LARP4B	100	63.252	ENSLOCG00000012290	larp4b	100	63.776	Lepisosteus_oculatus
ENSORLG00020020940	LARP4B	100	54.741	ENSLAFG00000015334	LARP4B	100	54.614	Loxodonta_africana
ENSORLG00020020940	LARP4B	100	54.625	ENSMFAG00000001766	LARP4B	100	52.625	Macaca_fascicularis
ENSORLG00020020940	LARP4B	100	54.625	ENSMMUG00000005279	LARP4B	100	54.500	Macaca_mulatta
ENSORLG00020020940	LARP4B	100	54.500	ENSMNEG00000014019	LARP4B	100	52.500	Macaca_nemestrina
ENSORLG00020020940	LARP4B	100	54.500	ENSMLEG00000035198	LARP4B	100	54.375	Mandrillus_leucophaeus
ENSORLG00020020940	LARP4B	100	82.620	ENSMAMG00000013742	LARP4B	100	82.620	Mastacembelus_armatus
ENSORLG00020020940	LARP4B	100	72.740	ENSMZEG00005006498	-	97	87.684	Maylandia_zebra
ENSORLG00020020940	LARP4B	94	82.873	ENSMZEG00005014594	-	100	83.011	Maylandia_zebra
ENSORLG00020020940	LARP4B	100	56.234	ENSMGAG00000005472	LARP4B	100	56.500	Meleagris_gallopavo
ENSORLG00020020940	LARP4B	100	53.866	ENSMAUG00000021657	Larp4b	100	53.739	Mesocricetus_auratus
ENSORLG00020020940	LARP4B	100	55.232	ENSMICG00000001301	LARP4B	100	55.232	Microcebus_murinus
ENSORLG00020020940	LARP4B	87	59.560	ENSMOCG00000021452	Larp4b	86	59.391	Microtus_ochrogaster
ENSORLG00020020940	LARP4B	86	93.103	ENSMMOG00000011253	-	100	68.428	Mola_mola
ENSORLG00020020940	LARP4B	100	55.570	ENSMODG00000005957	LARP4B	100	55.698	Monodelphis_domestica
ENSORLG00020020940	LARP4B	100	68.652	ENSMALG00000012432	LARP4B	100	68.511	Monopterus_albus
ENSORLG00020020940	LARP4B	100	54.568	MGP_CAROLIEiJ_G0018216	Larp4b	100	54.568	Mus_caroli
ENSORLG00020020940	LARP4B	100	55.044	ENSMUSG00000033499	Larp4b	100	60.406	Mus_musculus
ENSORLG00020020940	LARP4B	100	54.806	MGP_PahariEiJ_G0019266	Larp4b	100	54.682	Mus_pahari
ENSORLG00020020940	LARP4B	100	54.919	MGP_SPRETEiJ_G0019074	Larp4b	100	60.406	Mus_spretus
ENSORLG00020020940	LARP4B	92	55.088	ENSMPUG00000016220	LARP4B	97	53.769	Mustela_putorius_furo
ENSORLG00020020940	LARP4B	89	55.443	ENSMLUG00000005880	LARP4B	99	53.498	Myotis_lucifugus
ENSORLG00020020940	LARP4B	100	54.568	ENSNGAG00000001750	Larp4b	100	54.443	Nannospalax_galili
ENSORLG00020020940	LARP4B	100	66.252	ENSNBRG00000020018	LARP4B	100	66.252	Neolamprologus_brichardi
ENSORLG00020020940	LARP4B	100	54.125	ENSNLEG00000013442	LARP4B	100	54.000	Nomascus_leucogenys
ENSORLG00020020940	LARP4B	84	46.388	ENSMEUG00000013114	-	83	46.388	Notamacropus_eugenii
ENSORLG00020020940	LARP4B	100	51.828	ENSOPRG00000003300	LARP4B	100	51.702	Ochotona_princeps
ENSORLG00020020940	LARP4B	100	50.623	ENSODEG00000001109	LARP4B	100	50.499	Octodon_degus
ENSORLG00020020940	LARP4B	100	82.990	ENSONIG00000017705	LARP4B	100	83.247	Oreochromis_niloticus
ENSORLG00020020940	LARP4B	100	55.074	ENSOANG00000006100	LARP4B	100	55.074	Ornithorhynchus_anatinus
ENSORLG00020020940	LARP4B	100	52.132	ENSOCUG00000004950	LARP4B	97	52.010	Oryctolagus_cuniculus
ENSORLG00020020940	LARP4B	100	99.080	ENSORLG00000006080	LARP4B	100	99.080	Oryzias_latipes
ENSORLG00020020940	LARP4B	100	98.578	ENSORLG00015020608	LARP4B	100	98.578	Oryzias_latipes_hsok
ENSORLG00020020940	LARP4B	100	93.324	ENSOMEG00000019619	LARP4B	100	93.466	Oryzias_melastigma
ENSORLG00020020940	LARP4B	96	54.339	ENSOGAG00000011540	LARP4B	99	54.206	Otolemur_garnettii
ENSORLG00020020940	LARP4B	97	53.916	ENSOARG00000015320	LARP4B	96	53.916	Ovis_aries
ENSORLG00020020940	LARP4B	100	54.384	ENSPPAG00000039232	LARP4B	100	54.257	Pan_paniscus
ENSORLG00020020940	LARP4B	90	56.745	ENSPPRG00000009489	LARP4B	100	53.741	Panthera_pardus
ENSORLG00020020940	LARP4B	90	56.745	ENSPTIG00000008543	LARP4B	100	53.741	Panthera_tigris_altaica
ENSORLG00020020940	LARP4B	100	54.384	ENSPTRG00000002235	LARP4B	100	54.257	Pan_troglodytes
ENSORLG00020020940	LARP4B	100	54.625	ENSPANG00000023546	LARP4B	100	52.625	Papio_anubis
ENSORLG00020020940	LARP4B	98	58.060	ENSPKIG00000012368	LARP4B	96	58.621	Paramormyrops_kingsleyae
ENSORLG00020020940	LARP4B	72	68.847	ENSPSIG00000005600	LARP4B	99	68.224	Pelodiscus_sinensis
ENSORLG00020020940	LARP4B	85	74.542	ENSPMGG00000008261	LARP4B	76	74.359	Periophthalmus_magnuspinnatus
ENSORLG00020020940	LARP4B	100	53.567	ENSPEMG00000014052	Larp4b	100	53.442	Peromyscus_maniculatus_bairdii
ENSORLG00020020940	LARP4B	100	81.759	ENSPFOG00000000029	LARP4B	100	81.759	Poecilia_formosa
ENSORLG00020020940	LARP4B	100	82.277	ENSPLAG00000002871	LARP4B	100	82.277	Poecilia_latipinna
ENSORLG00020020940	LARP4B	100	82.402	ENSPMEG00000016361	LARP4B	100	82.402	Poecilia_mexicana
ENSORLG00020020940	LARP4B	100	54.318	ENSPPYG00000002035	LARP4B	97	54.193	Pongo_abelii
ENSORLG00020020940	LARP4B	100	53.701	ENSPCOG00000014688	LARP4B	100	53.576	Propithecus_coquereli
ENSORLG00020020940	LARP4B	88	53.628	ENSPVAG00000009784	LARP4B	82	53.785	Pteropus_vampyrus
ENSORLG00020020940	LARP4B	100	83.844	ENSPNYG00000024252	LARP4B	100	84.123	Pundamilia_nyererei
ENSORLG00020020940	LARP4B	94	52.767	ENSPNAG00000028956	larp4b	96	52.497	Pygocentrus_nattereri
ENSORLG00020020940	LARP4B	99	53.769	ENSRNOG00000015888	Larp4b	100	53.758	Rattus_norvegicus
ENSORLG00020020940	LARP4B	100	55.000	ENSRBIG00000033294	LARP4B	100	54.875	Rhinopithecus_bieti
ENSORLG00020020940	LARP4B	100	55.125	ENSRROG00000033879	LARP4B	100	55.019	Rhinopithecus_roxellana
ENSORLG00020020940	LARP4B	100	49.624	ENSSBOG00000021109	LARP4B	100	49.499	Saimiri_boliviensis_boliviensis
ENSORLG00020020940	LARP4B	100	57.106	ENSSHAG00000013392	LARP4B	100	57.033	Sarcophilus_harrisii
ENSORLG00020020940	LARP4B	93	59.945	ENSSFOG00015003256	LARP4B	93	58.577	Scleropages_formosus
ENSORLG00020020940	LARP4B	100	71.466	ENSSMAG00000005982	-	100	75.641	Scophthalmus_maximus
ENSORLG00020020940	LARP4B	100	86.076	ENSSDUG00000006704	LARP4B	100	85.935	Seriola_dumerili
ENSORLG00020020940	LARP4B	100	73.955	ENSSLDG00000020660	LARP4B	97	80.000	Seriola_lalandi_dorsalis
ENSORLG00020020940	LARP4B	70	87.755	ENSSARG00000001243	-	77	87.755	Sorex_araneus
ENSORLG00020020940	LARP4B	100	62.309	ENSSPUG00000002102	-	100	62.170	Sphenodon_punctatus
ENSORLG00020020940	LARP4B	100	60.028	ENSSPUG00000013734	-	100	59.613	Sphenodon_punctatus
ENSORLG00020020940	LARP4B	78	89.655	ENSSPAG00000014628	LARP4B	92	89.655	Stegastes_partitus
ENSORLG00020020940	LARP4B	100	54.604	ENSSSCG00000011162	LARP4B	97	59.966	Sus_scrofa
ENSORLG00020020940	LARP4B	100	58.779	ENSTGUG00000000811	-	100	58.651	Taeniopygia_guttata
ENSORLG00020020940	LARP4B	100	67.178	ENSTNIG00000004571	-	98	67.561	Tetraodon_nigroviridis
ENSORLG00020020940	LARP4B	99	65.769	ENSTNIG00000007991	LARP4B	99	71.210	Tetraodon_nigroviridis
ENSORLG00020020940	LARP4B	77	58.126	ENSTTRG00000011151	LARP4B	87	58.882	Tursiops_truncatus
ENSORLG00020020940	LARP4B	86	56.604	ENSUAMG00000016461	LARP4B	95	56.313	Ursus_americanus
ENSORLG00020020940	LARP4B	89	56.328	ENSUMAG00000016127	LARP4B	100	53.567	Ursus_maritimus
ENSORLG00020020940	LARP4B	92	55.000	ENSVVUG00000008641	LARP4B	100	53.442	Vulpes_vulpes
ENSORLG00020020940	LARP4B	99	58.462	ENSXETG00000016882	larp4b	100	58.718	Xenopus_tropicalis
ENSORLG00020020940	LARP4B	100	70.455	ENSXCOG00000019952	LARP4B	100	70.455	Xiphophorus_couchianus
ENSORLG00020020940	LARP4B	100	82.444	ENSXMAG00000021533	LARP4B	100	82.163	Xiphophorus_maculatus