EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020021070 (Gene tree)
Gene ID: -
Gene Symbol: prpf8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 14087 bases
Position: chr13:15804966-15819052
Accession: 101172750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020020033	RRM_4	PF10598.9	9.7e-48	1	1
ENSORLP00020020033	U5_2-snRNA_bdg	PF10597.9	7.8e-74	1	1
ENSORLP00020020033	PRO8NT	PF08082.11	3.3e-87	1	1
ENSORLP00020020033	U6-snRNA_bdg	PF10596.9	2e-89	1	1
ENSORLP00020020033	PROCN	PF08083.11	2.5e-235	1	1
ENSORLP00020020033	PRP8_domainIV	PF12134.8	4.7e-130	1	1
ENSORLP00020020033	PROCT	PF08084.11	3e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020029347	-	7068	XM_023961976	ENSORLP00020020033	2355 (aa)	XP_023817744	-

Gene Model

Click here to download ENSORLG00020021070's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020021070's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020021070	prpf8	99	97.646	ENSG00000174231	PRPF8	99	97.646	Homo_sapiens
ENSORLG00020021070	prpf8	100	98.514	ENSAPOG00000010079	prpf8	100	98.514	Acanthochromis_polyacanthus
ENSORLG00020021070	prpf8	99	97.646	ENSAMEG00000007940	PRPF8	99	97.646	Ailuropoda_melanoleuca
ENSORLG00020021070	prpf8	100	97.246	ENSACIG00000018280	prpf8	100	97.246	Amphilophus_citrinellus
ENSORLG00020021070	prpf8	100	98.471	ENSAOCG00000010725	prpf8	100	98.471	Amphiprion_ocellaris
ENSORLG00020021070	prpf8	100	98.471	ENSAPEG00000014397	prpf8	100	98.471	Amphiprion_percula
ENSORLG00020021070	prpf8	100	97.707	ENSATEG00000010062	prpf8	100	97.707	Anabas_testudineus
ENSORLG00020021070	prpf8	95	98.088	ENSAPLG00000010357	PRPF8	100	98.088	Anas_platyrhynchos
ENSORLG00020021070	prpf8	82	96.186	ENSACAG00000014784	PRPF8	99	96.186	Anolis_carolinensis
ENSORLG00020021070	prpf8	99	97.646	ENSANAG00000032629	PRPF8	99	97.646	Aotus_nancymaae
ENSORLG00020021070	prpf8	100	98.599	ENSACLG00000020858	prpf8	100	98.599	Astatotilapia_calliptera
ENSORLG00020021070	prpf8	100	97.919	ENSAMXG00000020291	prpf8	100	97.919	Astyanax_mexicanus
ENSORLG00020021070	prpf8	99	97.646	ENSBTAG00000011488	PRPF8	99	97.646	Bos_taurus
ENSORLG00020021070	prpf8	98	86.237	WBGene00004187	prp-8	99	86.684	Caenorhabditis_elegans
ENSORLG00020021070	prpf8	99	97.646	ENSCJAG00000001911	PRPF8	99	97.646	Callithrix_jacchus
ENSORLG00020021070	prpf8	99	97.646	ENSCAFG00000019221	PRPF8	99	97.646	Canis_familiaris
ENSORLG00020021070	prpf8	95	98.082	ENSCAFG00020009943	PRPF8	100	98.082	Canis_lupus_dingo
ENSORLG00020021070	prpf8	99	97.646	ENSCHIG00000017499	PRPF8	99	97.646	Capra_hircus
ENSORLG00020021070	prpf8	99	97.646	ENSTSYG00000014120	PRPF8	99	97.646	Carlito_syrichta
ENSORLG00020021070	prpf8	95	95.859	ENSCAPG00000009459	PRPF8	99	95.859	Cavia_aperea
ENSORLG00020021070	prpf8	99	97.646	ENSCPOG00000010379	PRPF8	99	97.646	Cavia_porcellus
ENSORLG00020021070	prpf8	99	97.646	ENSCCAG00000031983	-	99	97.646	Cebus_capucinus
ENSORLG00020021070	prpf8	99	97.646	ENSCATG00000038595	PRPF8	99	97.646	Cercocebus_atys
ENSORLG00020021070	prpf8	99	97.646	ENSCLAG00000004388	PRPF8	99	97.646	Chinchilla_lanigera
ENSORLG00020021070	prpf8	99	97.646	ENSCSAG00000013929	PRPF8	99	97.646	Chlorocebus_sabaeus
ENSORLG00020021070	prpf8	80	97.333	ENSCHOG00000008590	PRPF8	87	97.333	Choloepus_hoffmanni
ENSORLG00020021070	prpf8	100	96.943	ENSCPBG00000020409	PRPF8	100	96.943	Chrysemys_picta_bellii
ENSORLG00020021070	prpf8	98	92.755	ENSCSAVG00000007825	-	100	91.155	Ciona_savignyi
ENSORLG00020021070	prpf8	99	97.646	ENSCANG00000043088	PRPF8	99	97.646	Colobus_angolensis_palliatus
ENSORLG00020021070	prpf8	73	99.018	ENSCGRG00000005129	Prpf8	100	99.018	Cricetulus_griseus_crigri
ENSORLG00020021070	prpf8	100	98.174	ENSCSEG00000007905	prpf8	100	98.132	Cynoglossus_semilaevis
ENSORLG00020021070	prpf8	100	97.962	ENSDARG00000026180	prpf8	100	97.962	Danio_rerio
ENSORLG00020021070	prpf8	93	97.172	ENSDNOG00000018471	PRPF8	99	97.172	Dasypus_novemcinctus
ENSORLG00020021070	prpf8	83	96.380	ENSDORG00000006185	Prpf8	96	96.380	Dipodomys_ordii
ENSORLG00020021070	prpf8	99	91.306	FBgn0033688	Prp8	97	91.710	Drosophila_melanogaster
ENSORLG00020021070	prpf8	99	92.252	ENSETEG00000017592	PRPF8	99	92.252	Echinops_telfairi
ENSORLG00020021070	prpf8	99	93.393	ENSEBUG00000006548	prpf8	99	93.393	Eptatretus_burgeri
ENSORLG00020021070	prpf8	99	97.646	ENSEASG00005009514	PRPF8	99	98.440	Equus_asinus_asinus
ENSORLG00020021070	prpf8	97	98.111	ENSECAG00000021318	PRPF8	100	98.111	Equus_caballus
ENSORLG00020021070	prpf8	66	98.519	ENSEEUG00000012120	-	66	98.519	Erinaceus_europaeus
ENSORLG00020021070	prpf8	98	96.876	ENSELUG00000007120	prpf8	99	96.876	Esox_lucius
ENSORLG00020021070	prpf8	99	97.646	ENSFCAG00000006297	PRPF8	99	97.646	Felis_catus
ENSORLG00020021070	prpf8	100	96.985	ENSFALG00000006628	PRPF8	100	96.985	Ficedula_albicollis
ENSORLG00020021070	prpf8	99	97.646	ENSFDAG00000004711	PRPF8	99	97.646	Fukomys_damarensis
ENSORLG00020021070	prpf8	100	98.259	ENSFHEG00000021084	prpf8	100	98.259	Fundulus_heteroclitus
ENSORLG00020021070	prpf8	100	95.926	ENSGMOG00000002028	prpf8	99	95.926	Gadus_morhua
ENSORLG00020021070	prpf8	100	96.985	ENSGALG00000002943	PRPF8	100	96.985	Gallus_gallus
ENSORLG00020021070	prpf8	99	98.935	ENSGAFG00000010337	prpf8	99	98.935	Gambusia_affinis
ENSORLG00020021070	prpf8	100	98.556	ENSGACG00000008504	prpf8	100	98.635	Gasterosteus_aculeatus
ENSORLG00020021070	prpf8	100	96.985	ENSGAGG00000008350	PRPF8	100	96.985	Gopherus_agassizii
ENSORLG00020021070	prpf8	99	97.646	ENSGGOG00000005516	PRPF8	99	97.646	Gorilla_gorilla
ENSORLG00020021070	prpf8	100	98.047	ENSHBUG00000016192	prpf8	100	98.004	Haplochromis_burtoni
ENSORLG00020021070	prpf8	99	97.646	ENSHGLG00000012029	PRPF8	99	97.646	Heterocephalus_glaber_female
ENSORLG00020021070	prpf8	99	97.646	ENSHGLG00100016494	PRPF8	99	97.646	Heterocephalus_glaber_male
ENSORLG00020021070	prpf8	100	98.386	ENSHCOG00000016414	prpf8	100	98.386	Hippocampus_comes
ENSORLG00020021070	prpf8	100	97.834	ENSIPUG00000023230	prpf8	100	97.834	Ictalurus_punctatus
ENSORLG00020021070	prpf8	99	97.646	ENSSTOG00000005128	PRPF8	99	97.646	Ictidomys_tridecemlineatus
ENSORLG00020021070	prpf8	99	95.505	ENSJJAG00000021159	Prpf8	99	95.505	Jaculus_jaculus
ENSORLG00020021070	prpf8	99	98.636	ENSKMAG00000016118	prpf8	100	98.636	Kryptolebias_marmoratus
ENSORLG00020021070	prpf8	100	98.301	ENSLBEG00000026903	prpf8	100	98.301	Labrus_bergylta
ENSORLG00020021070	prpf8	95	94.720	ENSLACG00000010479	PRPF8	99	98.213	Latimeria_chalumnae
ENSORLG00020021070	prpf8	99	98.497	ENSLOCG00000005409	prpf8	99	98.497	Lepisosteus_oculatus
ENSORLG00020021070	prpf8	99	97.646	ENSLAFG00000015445	PRPF8	99	97.646	Loxodonta_africana
ENSORLG00020021070	prpf8	99	97.646	ENSMFAG00000039995	PRPF8	99	97.646	Macaca_fascicularis
ENSORLG00020021070	prpf8	99	97.646	ENSMMUG00000004820	PRPF8	99	97.646	Macaca_mulatta
ENSORLG00020021070	prpf8	99	97.646	ENSMNEG00000035713	PRPF8	99	97.646	Macaca_nemestrina
ENSORLG00020021070	prpf8	99	97.646	ENSMLEG00000037937	PRPF8	99	97.646	Mandrillus_leucophaeus
ENSORLG00020021070	prpf8	100	98.344	ENSMAMG00000008919	prpf8	100	98.344	Mastacembelus_armatus
ENSORLG00020021070	prpf8	100	98.599	ENSMZEG00005015073	prpf8	100	98.599	Maylandia_zebra
ENSORLG00020021070	prpf8	100	96.985	ENSMGAG00000004769	PRPF8	100	96.985	Meleagris_gallopavo
ENSORLG00020021070	prpf8	99	97.646	ENSMICG00000010320	PRPF8	99	97.646	Microcebus_murinus
ENSORLG00020021070	prpf8	99	97.646	ENSMOCG00000016838	Prpf8	99	97.646	Microtus_ochrogaster
ENSORLG00020021070	prpf8	100	98.004	ENSMMOG00000011887	prpf8	100	98.004	Mola_mola
ENSORLG00020021070	prpf8	99	97.560	ENSMODG00000010480	PRPF8	99	97.560	Monodelphis_domestica
ENSORLG00020021070	prpf8	97	98.446	ENSMALG00000003558	prpf8	100	98.446	Monopterus_albus
ENSORLG00020021070	prpf8	99	97.603	MGP_CAROLIEiJ_G0016740	Prpf8	99	97.603	Mus_caroli
ENSORLG00020021070	prpf8	99	97.603	ENSMUSG00000020850	Prpf8	99	97.603	Mus_musculus
ENSORLG00020021070	prpf8	99	97.560	MGP_PahariEiJ_G0017877	Prpf8	99	97.560	Mus_pahari
ENSORLG00020021070	prpf8	99	97.603	MGP_SPRETEiJ_G0017583	Prpf8	99	97.603	Mus_spretus
ENSORLG00020021070	prpf8	99	97.646	ENSMPUG00000013227	PRPF8	99	97.646	Mustela_putorius_furo
ENSORLG00020021070	prpf8	99	97.520	ENSMLUG00000002666	PRPF8	99	97.520	Myotis_lucifugus
ENSORLG00020021070	prpf8	99	95.890	ENSNGAG00000005305	Prpf8	99	95.890	Nannospalax_galili
ENSORLG00020021070	prpf8	100	98.641	ENSNBRG00000013127	prpf8	100	98.641	Neolamprologus_brichardi
ENSORLG00020021070	prpf8	96	96.696	ENSNLEG00000000897	PRPF8	98	96.696	Nomascus_leucogenys
ENSORLG00020021070	prpf8	98	96.221	ENSMEUG00000015999	PRPF8	100	96.221	Notamacropus_eugenii
ENSORLG00020021070	prpf8	99	96.147	ENSOPRG00000003102	PRPF8	99	96.147	Ochotona_princeps
ENSORLG00020021070	prpf8	99	97.646	ENSODEG00000008468	PRPF8	99	97.646	Octodon_degus
ENSORLG00020021070	prpf8	100	98.641	ENSONIG00000008153	prpf8	100	98.641	Oreochromis_niloticus
ENSORLG00020021070	prpf8	81	98.973	ENSOANG00000004250	PRPF8	97	98.973	Ornithorhynchus_anatinus
ENSORLG00020021070	prpf8	99	97.646	ENSOCUG00000000081	PRPF8	99	97.646	Oryctolagus_cuniculus
ENSORLG00020021070	prpf8	100	99.958	ENSORLG00000008036	prpf8	100	99.958	Oryzias_latipes
ENSORLG00020021070	prpf8	100	99.915	ENSORLG00015002340	prpf8	100	99.915	Oryzias_latipes_hsok
ENSORLG00020021070	prpf8	100	97.919	ENSOMEG00000016866	prpf8	100	97.919	Oryzias_melastigma
ENSORLG00020021070	prpf8	99	97.520	ENSOARG00000013312	PRPF8	99	97.520	Ovis_aries
ENSORLG00020021070	prpf8	99	97.646	ENSPPAG00000042753	PRPF8	99	97.646	Pan_paniscus
ENSORLG00020021070	prpf8	99	97.646	ENSPPRG00000008746	PRPF8	99	97.646	Panthera_pardus
ENSORLG00020021070	prpf8	99	97.560	ENSPTIG00000019200	PRPF8	99	97.560	Panthera_tigris_altaica
ENSORLG00020021070	prpf8	99	97.646	ENSPTRG00000039576	PRPF8	99	97.646	Pan_troglodytes
ENSORLG00020021070	prpf8	98	98.133	ENSPANG00000024607	PRPF8	98	98.133	Papio_anubis
ENSORLG00020021070	prpf8	100	97.962	ENSPKIG00000011201	prpf8	100	97.962	Paramormyrops_kingsleyae
ENSORLG00020021070	prpf8	100	96.900	ENSPSIG00000013393	PRPF8	100	96.900	Pelodiscus_sinensis
ENSORLG00020021070	prpf8	99	97.646	ENSPEMG00000021699	Prpf8	99	97.646	Peromyscus_maniculatus_bairdii
ENSORLG00020021070	prpf8	95	93.678	ENSPMAG00000005438	prpf8	100	93.722	Petromyzon_marinus
ENSORLG00020021070	prpf8	99	97.560	ENSPCIG00000022603	PRPF8	100	97.993	Phascolarctos_cinereus
ENSORLG00020021070	prpf8	100	98.771	ENSPFOG00000007005	prpf8	100	98.771	Poecilia_formosa
ENSORLG00020021070	prpf8	100	96.688	ENSPLAG00000020777	prpf8	100	96.688	Poecilia_latipinna
ENSORLG00020021070	prpf8	100	98.771	ENSPMEG00000004051	prpf8	100	98.771	Poecilia_mexicana
ENSORLG00020021070	prpf8	100	98.813	ENSPREG00000021902	prpf8	100	98.813	Poecilia_reticulata
ENSORLG00020021070	prpf8	99	97.646	ENSPPYG00000007777	PRPF8	99	97.646	Pongo_abelii
ENSORLG00020021070	prpf8	89	96.782	ENSPCAG00000008938	PRPF8	89	96.782	Procavia_capensis
ENSORLG00020021070	prpf8	99	97.646	ENSPCOG00000015182	PRPF8	99	97.646	Propithecus_coquereli
ENSORLG00020021070	prpf8	92	98.449	ENSPVAG00000002134	PRPF8	93	98.449	Pteropus_vampyrus
ENSORLG00020021070	prpf8	100	98.047	ENSPNYG00000016356	prpf8	100	98.004	Pundamilia_nyererei
ENSORLG00020021070	prpf8	100	97.919	ENSPNAG00000009247	prpf8	100	97.919	Pygocentrus_nattereri
ENSORLG00020021070	prpf8	99	97.603	ENSRNOG00000003495	Prpf8	99	97.603	Rattus_norvegicus
ENSORLG00020021070	prpf8	99	97.646	ENSRBIG00000031219	PRPF8	100	97.636	Rhinopithecus_bieti
ENSORLG00020021070	prpf8	99	97.646	ENSRROG00000038014	PRPF8	100	97.636	Rhinopithecus_roxellana
ENSORLG00020021070	prpf8	98	62.307	YHR165C	PRP8	96	62.350	Saccharomyces_cerevisiae
ENSORLG00020021070	prpf8	99	97.646	ENSSBOG00000029717	PRPF8	99	97.646	Saimiri_boliviensis_boliviensis
ENSORLG00020021070	prpf8	99	97.517	ENSSHAG00000006167	PRPF8	99	97.517	Sarcophilus_harrisii
ENSORLG00020021070	prpf8	100	97.877	ENSSFOG00015013905	prpf8	100	97.877	Scleropages_formosus
ENSORLG00020021070	prpf8	100	98.259	ENSSMAG00000017736	prpf8	100	98.259	Scophthalmus_maximus
ENSORLG00020021070	prpf8	100	98.599	ENSSDUG00000003029	prpf8	100	98.599	Seriola_dumerili
ENSORLG00020021070	prpf8	68	99.750	ENSSLDG00000017096	prpf8	100	99.750	Seriola_lalandi_dorsalis
ENSORLG00020021070	prpf8	87	94.402	ENSSARG00000002892	PRPF8	87	94.402	Sorex_araneus
ENSORLG00020021070	prpf8	99	97.688	ENSSPUG00000007463	PRPF8	99	97.688	Sphenodon_punctatus
ENSORLG00020021070	prpf8	100	97.919	ENSSPAG00000015639	prpf8	100	97.919	Stegastes_partitus
ENSORLG00020021070	prpf8	99	97.646	ENSSSCG00000017817	PRPF8	99	97.646	Sus_scrofa
ENSORLG00020021070	prpf8	100	96.985	ENSTGUG00000005648	-	100	96.985	Taeniopygia_guttata
ENSORLG00020021070	prpf8	51	98.429	ENSTGUG00000015597	-	95	98.429	Taeniopygia_guttata
ENSORLG00020021070	prpf8	100	98.089	ENSTRUG00000015906	prpf8	100	98.089	Takifugu_rubripes
ENSORLG00020021070	prpf8	95	99.343	ENSTNIG00000003460	prpf8	99	99.343	Tetraodon_nigroviridis
ENSORLG00020021070	prpf8	88	98.776	ENSTBEG00000006431	PRPF8	89	98.776	Tupaia_belangeri
ENSORLG00020021070	prpf8	99	97.046	ENSTTRG00000006869	PRPF8	99	97.046	Tursiops_truncatus
ENSORLG00020021070	prpf8	53	96.585	ENSUAMG00000015644	-	95	96.585	Ursus_americanus
ENSORLG00020021070	prpf8	99	97.389	ENSUMAG00000009385	PRPF8	99	97.389	Ursus_maritimus
ENSORLG00020021070	prpf8	71	97.931	ENSVPAG00000006063	-	70	97.931	Vicugna_pacos
ENSORLG00020021070	prpf8	99	96.905	ENSVVUG00000021695	PRPF8	99	96.905	Vulpes_vulpes
ENSORLG00020021070	prpf8	99	97.596	ENSXETG00000022259	prpf8	99	97.596	Xenopus_tropicalis
ENSORLG00020021070	prpf8	100	98.471	ENSXCOG00000012775	prpf8	100	98.429	Xiphophorus_couchianus
ENSORLG00020021070	prpf8	100	98.429	ENSXMAG00000008505	prpf8	100	98.386	Xiphophorus_maculatus