EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020021071 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein ORAB-1-like
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 4527 bases
Position: chr13:1506454-1510980
Accession: 101173484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020020068	MMR_HSR1	PF01926.23	6.5e-05	1	1
ENSORLP00020020071	MMR_HSR1	PF01926.23	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020035452	-	1528	-	ENSORLP00020020071	213 (aa)	XP_011480474	UPI0005CC37EE
ENSORLT00020029359	-	1456	-	ENSORLP00020020068	213 (aa)	XP_011480474	UPI0005CC37EE
ENSORLT00020029349	-	348	-	ENSORLP00020020053	115 (aa)	-	-

Gene Model

Click here to download ENSORLG00020021071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020021071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020021071	zgc:171927	85	47.514	ENSORLG00020008333	rab18a	79	50.000
ENSORLG00020021071	zgc:171927	76	51.235	ENSORLG00020004905	RAB15	78	51.235
ENSORLG00020021071	zgc:171927	99	45.714	ENSORLG00020013747	rab11al	96	45.714
ENSORLG00020021071	zgc:171927	86	37.158	ENSORLG00020001816	rab6a	88	37.158
ENSORLG00020021071	zgc:171927	99	44.762	ENSORLG00020020844	RAB11B	96	44.762
ENSORLG00020021071	zgc:171927	77	59.509	ENSORLG00020000867	si:dkey-16l2.16	77	59.509
ENSORLG00020021071	zgc:171927	79	38.728	ENSORLG00020020961	kras	92	39.024
ENSORLG00020021071	zgc:171927	78	34.503	ENSORLG00020005240	RAB29	84	34.503
ENSORLG00020021071	zgc:171927	99	45.024	ENSORLG00020020816	rab11ba	96	45.024
ENSORLG00020021071	zgc:171927	98	40.476	ENSORLG00020020811	rab25a	67	40.476
ENSORLG00020021071	zgc:171927	75	39.264	ENSORLG00020005952	rab7a	79	39.264
ENSORLG00020021071	zgc:171927	74	39.873	ENSORLG00020020220	rab23	87	37.640
ENSORLG00020021071	zgc:171927	99	44.762	ENSORLG00020019393	rab11bb	96	44.762
ENSORLG00020021071	zgc:171927	76	39.130	ENSORLG00020000604	rab41	76	38.509
ENSORLG00020021071	zgc:171927	90	53.061	ENSORLG00020009535	-	98	53.061
ENSORLG00020021071	zgc:171927	89	42.995	ENSORLG00020012685	zgc:101559	89	42.995
ENSORLG00020021071	zgc:171927	76	48.765	ENSORLG00020011590	rab18b	79	48.765
ENSORLG00020021071	zgc:171927	77	45.122	ENSORLG00020015717	-	67	45.122
ENSORLG00020021071	zgc:171927	73	37.107	ENSORLG00020000483	rab9a	79	37.107
ENSORLG00020021071	zgc:171927	56	32.500	ENSORLG00020021398	arl8ba	62	32.500
ENSORLG00020021071	zgc:171927	79	44.444	ENSORLG00020019269	RAB39B	80	44.444
ENSORLG00020021071	zgc:171927	98	36.744	ENSORLG00020020277	si:dkey-34d22.5	97	36.744
ENSORLG00020021071	zgc:171927	86	42.473	ENSORLG00020021663	rab3db	87	41.885
ENSORLG00020021071	zgc:171927	78	32.738	ENSORLG00020010114	-	91	32.738
ENSORLG00020021071	zgc:171927	74	40.244	ENSORLG00020016139	rab34b	59	40.244
ENSORLG00020021071	zgc:171927	92	74.242	ENSORLG00020021697	-	98	74.242
ENSORLG00020021071	zgc:171927	55	31.092	ENSORLG00020004126	arl8a	61	31.092
ENSORLG00020021071	zgc:171927	79	35.838	ENSORLG00020005258	rerg	85	35.838
ENSORLG00020021071	zgc:171927	79	50.296	ENSORLG00020018259	rab15	79	50.296
ENSORLG00020021071	zgc:171927	82	32.571	ENSORLG00020002801	rheb	90	32.571
ENSORLG00020021071	zgc:171927	69	45.098	ENSORLG00020013870	-	63	45.098
ENSORLG00020021071	zgc:171927	84	81.215	ENSORLG00020000892	rab1ab	90	81.215
ENSORLG00020021071	zgc:171927	82	43.678	ENSORLG00020020922	rab5aa	81	43.678
ENSORLG00020021071	zgc:171927	80	47.093	ENSORLG00020005131	rab12	72	47.619
ENSORLG00020021071	zgc:171927	80	37.714	ENSORLG00020009158	rab9b	82	37.714
ENSORLG00020021071	zgc:171927	81	41.622	ENSORLG00020018196	rab33ba	79	41.622
ENSORLG00020021071	zgc:171927	72	37.342	ENSORLG00020019465	si:dkey-13a21.4	77	37.342
ENSORLG00020021071	zgc:171927	91	42.289	ENSORLG00020018986	rab14	92	39.801
ENSORLG00020021071	zgc:171927	76	37.654	ENSORLG00020008129	hras	85	37.654
ENSORLG00020021071	zgc:171927	77	41.765	ENSORLG00020020266	rab33a	61	41.765
ENSORLG00020021071	zgc:171927	74	39.130	ENSORLG00020010041	rab34a	61	39.130
ENSORLG00020021071	zgc:171927	80	44.186	ENSORLG00020013895	rab42a	79	44.186
ENSORLG00020021071	zgc:171927	91	46.114	ENSORLG00020020035	rab2a	88	46.114
ENSORLG00020021071	zgc:171927	94	35.821	ENSORLG00020013337	rab6bb	90	35.821
ENSORLG00020021071	zgc:171927	76	38.650	ENSORLG00020013690	zgc:55558	87	38.650
ENSORLG00020021071	zgc:171927	73	36.478	ENSORLG00020001721	rabl2	67	36.478
ENSORLG00020021071	zgc:171927	98	41.148	ENSORLG00020013719	rab25b	98	40.887
ENSORLG00020021071	zgc:171927	78	53.614	ENSORLG00020015288	rab30	82	53.614
ENSORLG00020021071	zgc:171927	55	30.833	ENSORLG00020011342	arl4aa	62	30.833
ENSORLG00020021071	zgc:171927	72	32.468	ENSORLG00020005150	rhebl1	83	32.468
ENSORLG00020021071	zgc:171927	96	40.000	ENSORLG00020008388	rab5c	89	40.000
ENSORLG00020021071	zgc:171927	56	36.290	ENSORLG00020011620	rras2	70	36.290
ENSORLG00020021071	zgc:171927	96	34.112	ENSORLG00020010772	rab6ba	93	34.112
ENSORLG00020021071	zgc:171927	74	37.037	ENSORLG00020008512	-	81	37.037
ENSORLG00020021071	zgc:171927	55	30.508	ENSORLG00020002055	arl8bb	61	30.508
ENSORLG00020021071	zgc:171927	86	34.054	ENSORLG00020012306	si:ch73-116o1.2	88	34.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020021071	zgc:171927	100	92.523	ENSAPOG00000004980	-	100	92.523	Acanthochromis_polyacanthus
ENSORLG00020021071	zgc:171927	100	90.654	ENSACIG00000009006	zgc:171927	100	90.654	Amphilophus_citrinellus
ENSORLG00020021071	zgc:171927	71	88.387	ENSAOCG00000013808	-	93	96.694	Amphiprion_ocellaris
ENSORLG00020021071	zgc:171927	100	91.121	ENSAOCG00000024149	-	100	91.121	Amphiprion_ocellaris
ENSORLG00020021071	zgc:171927	100	91.589	ENSAPEG00000022171	zgc:171927	99	91.589	Amphiprion_percula
ENSORLG00020021071	zgc:171927	100	91.589	ENSATEG00000003430	zgc:171927	100	91.589	Anabas_testudineus
ENSORLG00020021071	zgc:171927	100	90.141	ENSACLG00000013734	-	100	90.141	Astatotilapia_calliptera
ENSORLG00020021071	zgc:171927	100	78.505	ENSAMXG00000039486	zgc:171927	100	78.505	Astyanax_mexicanus
ENSORLG00020021071	zgc:171927	100	88.318	ENSCSEG00000014416	zgc:171927	100	88.318	Cynoglossus_semilaevis
ENSORLG00020021071	zgc:171927	100	90.654	ENSCVAG00000009222	zgc:171927	100	90.654	Cyprinodon_variegatus
ENSORLG00020021071	zgc:171927	100	78.505	ENSDARG00000033056	zgc:171927	100	78.505	Danio_rerio
ENSORLG00020021071	zgc:171927	94	82.090	ENSELUG00000011680	zgc:171927	99	78.972	Esox_lucius
ENSORLG00020021071	zgc:171927	100	91.121	ENSFHEG00000022176	zgc:171927	100	91.121	Fundulus_heteroclitus
ENSORLG00020021071	zgc:171927	98	80.476	ENSGMOG00000004979	-	97	80.476	Gadus_morhua
ENSORLG00020021071	zgc:171927	98	89.474	ENSGAFG00000015702	zgc:171927	84	89.474	Gambusia_affinis
ENSORLG00020021071	zgc:171927	100	88.785	ENSGACG00000013401	zgc:171927	99	88.785	Gasterosteus_aculeatus
ENSORLG00020021071	zgc:171927	100	90.141	ENSHBUG00000002397	-	100	90.141	Haplochromis_burtoni
ENSORLG00020021071	zgc:171927	100	90.654	ENSKMAG00000009856	zgc:171927	100	90.654	Kryptolebias_marmoratus
ENSORLG00020021071	zgc:171927	100	88.318	ENSLBEG00000005791	-	100	88.318	Labrus_bergylta
ENSORLG00020021071	zgc:171927	98	87.560	ENSLBEG00000027226	-	89	87.560	Labrus_bergylta
ENSORLG00020021071	zgc:171927	98	70.813	ENSLOCG00000014692	zgc:171927	96	70.813	Lepisosteus_oculatus
ENSORLG00020021071	zgc:171927	100	87.850	ENSMAMG00000020135	zgc:171927	100	87.850	Mastacembelus_armatus
ENSORLG00020021071	zgc:171927	100	90.141	ENSMZEG00005024685	-	100	90.141	Maylandia_zebra
ENSORLG00020021071	zgc:171927	100	87.383	ENSMMOG00000009833	-	100	87.383	Mola_mola
ENSORLG00020021071	zgc:171927	100	88.732	ENSMALG00000021129	zgc:171927	100	88.732	Monopterus_albus
ENSORLG00020021071	zgc:171927	100	89.671	ENSNBRG00000006202	zgc:171927	100	89.671	Neolamprologus_brichardi
ENSORLG00020021071	zgc:171927	100	100.000	ENSORLG00000000602	zgc:171927	100	100.000	Oryzias_latipes
ENSORLG00020021071	zgc:171927	100	99.061	ENSORLG00015010098	zgc:171927	100	99.061	Oryzias_latipes_hsok
ENSORLG00020021071	zgc:171927	100	94.393	ENSOMEG00000020594	zgc:171927	100	94.393	Oryzias_melastigma
ENSORLG00020021071	zgc:171927	100	90.187	ENSPFOG00000013810	zgc:171927	99	90.187	Poecilia_formosa
ENSORLG00020021071	zgc:171927	100	89.252	ENSPLAG00000005869	zgc:171927	100	89.252	Poecilia_latipinna
ENSORLG00020021071	zgc:171927	100	90.187	ENSPMEG00000022350	zgc:171927	100	90.187	Poecilia_mexicana
ENSORLG00020021071	zgc:171927	100	90.654	ENSPREG00000017517	zgc:171927	100	90.654	Poecilia_reticulata
ENSORLG00020021071	zgc:171927	100	90.141	ENSPNYG00000007520	-	100	90.141	Pundamilia_nyererei
ENSORLG00020021071	zgc:171927	100	78.972	ENSPNAG00000029574	zgc:171927	100	78.972	Pygocentrus_nattereri
ENSORLG00020021071	zgc:171927	100	77.103	ENSSFOG00015005464	zgc:171927	99	77.103	Scleropages_formosus
ENSORLG00020021071	zgc:171927	100	88.318	ENSSMAG00000004416	-	100	88.318	Scophthalmus_maximus
ENSORLG00020021071	zgc:171927	100	90.654	ENSSDUG00000004445	zgc:171927	100	90.654	Seriola_dumerili
ENSORLG00020021071	zgc:171927	100	90.654	ENSSLDG00000018024	zgc:171927	100	90.654	Seriola_lalandi_dorsalis
ENSORLG00020021071	zgc:171927	100	92.523	ENSSPAG00000013533	zgc:171927	100	92.523	Stegastes_partitus
ENSORLG00020021071	zgc:171927	100	91.121	ENSXCOG00000010695	zgc:171927	100	91.121	Xiphophorus_couchianus
ENSORLG00020021071	zgc:171927	100	91.121	ENSXMAG00000004683	zgc:171927	100	91.121	Xiphophorus_maculatus