EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020021084 (Gene tree)
Gene ID: -
Gene Symbol: sb:cb81
Alias: -
Full Name: sb:cb81
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 3517 bases
Position: chr13:1479707-1483223
Accession: ZDB-GENE-030131-9939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020034569	zf-CCCH	PF00642.24	1.6e-22	1	2
ENSORLP00020034569	zf-CCCH	PF00642.24	1.6e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020029419	-	3177	-	ENSORLP00020034569	386 (aa)	-	-

Gene Model

Click here to download ENSORLG00020021084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020021084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020021084	sb:cb81	84	37.565	ENSAPOG00000014920	zgc:162730	57	41.833	Acanthochromis_polyacanthus
ENSORLG00020021084	sb:cb81	68	37.821	ENSAPOG00000014912	zgc:114130	67	36.334	Acanthochromis_polyacanthus
ENSORLG00020021084	sb:cb81	95	70.321	ENSAPOG00000011209	sb:cb81	99	69.086	Acanthochromis_polyacanthus
ENSORLG00020021084	sb:cb81	100	68.009	ENSACIG00000009027	sb:cb81	100	68.246	Amphilophus_citrinellus
ENSORLG00020021084	sb:cb81	100	37.408	ENSACIG00000016314	zfp36l1a	51	45.411	Amphilophus_citrinellus
ENSORLG00020021084	sb:cb81	55	41.841	ENSACIG00000017366	zgc:162730	96	42.149	Amphilophus_citrinellus
ENSORLG00020021084	sb:cb81	63	42.759	ENSAOCG00000022227	zgc:114130	67	36.334	Amphiprion_ocellaris
ENSORLG00020021084	sb:cb81	100	69.289	ENSAOCG00000024158	sb:cb81	100	67.005	Amphiprion_ocellaris
ENSORLG00020021084	sb:cb81	82	38.133	ENSAOCG00000002001	zgc:162730	57	41.833	Amphiprion_ocellaris
ENSORLG00020021084	sb:cb81	100	68.528	ENSAPEG00000022405	sb:cb81	100	67.005	Amphiprion_percula
ENSORLG00020021084	sb:cb81	82	38.133	ENSAPEG00000015490	zgc:162730	60	41.833	Amphiprion_percula
ENSORLG00020021084	sb:cb81	68	37.821	ENSAPEG00000015497	zgc:114130	67	36.656	Amphiprion_percula
ENSORLG00020021084	sb:cb81	68	37.742	ENSATEG00000008781	zgc:114130	64	36.486	Anabas_testudineus
ENSORLG00020021084	sb:cb81	100	69.626	ENSATEG00000003462	sb:cb81	100	67.136	Anabas_testudineus
ENSORLG00020021084	sb:cb81	61	42.086	ENSATEG00000014086	zfp36l1b	72	40.541	Anabas_testudineus
ENSORLG00020021084	sb:cb81	100	69.905	ENSACLG00000013759	sb:cb81	100	69.668	Astatotilapia_calliptera
ENSORLG00020021084	sb:cb81	100	55.037	ENSAMXG00000034874	sb:cb81	100	52.723	Astyanax_mexicanus
ENSORLG00020021084	sb:cb81	100	37.831	ENSAMXG00000038581	zgc:114130	95	37.923	Astyanax_mexicanus
ENSORLG00020021084	sb:cb81	98	39.206	ENSCGRG00001010926	Zfp36l1	60	43.210	Cricetulus_griseus_chok1gshd
ENSORLG00020021084	sb:cb81	98	38.958	ENSCGRG00000007735	Zfp36l1	60	42.798	Cricetulus_griseus_crigri
ENSORLG00020021084	sb:cb81	100	63.387	ENSCSEG00000014426	sb:cb81	86	62.299	Cynoglossus_semilaevis
ENSORLG00020021084	sb:cb81	81	38.793	ENSCSEG00000018283	zgc:162730	97	35.909	Cynoglossus_semilaevis
ENSORLG00020021084	sb:cb81	59	39.194	ENSCSEG00000018290	zgc:114130	60	39.544	Cynoglossus_semilaevis
ENSORLG00020021084	sb:cb81	100	68.333	ENSCVAG00000009207	sb:cb81	100	67.386	Cyprinodon_variegatus
ENSORLG00020021084	sb:cb81	78	41.389	ENSCVAG00000018571	zgc:162730	99	35.897	Cyprinodon_variegatus
ENSORLG00020021084	sb:cb81	65	44.531	ENSCVAG00000008482	zfp36l1a	63	44.231	Cyprinodon_variegatus
ENSORLG00020021084	sb:cb81	100	56.818	ENSDARG00000040503	sb:cb81	100	56.313	Danio_rerio
ENSORLG00020021084	sb:cb81	85	41.003	ENSDARG00000103720	zgc:162730	92	37.059	Danio_rerio
ENSORLG00020021084	sb:cb81	100	38.958	ENSDARG00000040725	zgc:114130	96	37.838	Danio_rerio
ENSORLG00020021084	sb:cb81	70	41.071	ENSDNOG00000005159	ZFP36L1	78	43.388	Dasypus_novemcinctus
ENSORLG00020021084	sb:cb81	100	40.806	ENSELUG00000013151	zgc:114130	60	44.534	Esox_lucius
ENSORLG00020021084	sb:cb81	100	56.416	ENSELUG00000013045	sb:cb81	100	54.126	Esox_lucius
ENSORLG00020021084	sb:cb81	97	37.468	ENSELUG00000013158	zgc:162730	99	36.409	Esox_lucius
ENSORLG00020021084	sb:cb81	92	39.142	ENSELUG00000008675	zfp36l1b	52	45.946	Esox_lucius
ENSORLG00020021084	sb:cb81	67	36.482	ENSFHEG00000000656	zgc:114130	69	35.974	Fundulus_heteroclitus
ENSORLG00020021084	sb:cb81	100	68.735	ENSFHEG00000022187	sb:cb81	100	69.212	Fundulus_heteroclitus
ENSORLG00020021084	sb:cb81	79	38.827	ENSFHEG00000013710	zgc:162730	68	39.249	Fundulus_heteroclitus
ENSORLG00020021084	sb:cb81	64	43.874	ENSFHEG00000001313	zfp36l1a	62	43.580	Fundulus_heteroclitus
ENSORLG00020021084	sb:cb81	65	57.736	ENSGMOG00000016803	sb:cb81	92	61.798	Gadus_morhua
ENSORLG00020021084	sb:cb81	63	41.379	ENSGMOG00000017242	zgc:162730	100	35.736	Gadus_morhua
ENSORLG00020021084	sb:cb81	100	38.875	ENSGALG00000039228	ZFP36L1	62	41.107	Gallus_gallus
ENSORLG00020021084	sb:cb81	78	39.718	ENSGAFG00000009953	zgc:162730	58	41.767	Gambusia_affinis
ENSORLG00020021084	sb:cb81	65	45.136	ENSGAFG00000018711	zfp36l1a	62	43.411	Gambusia_affinis
ENSORLG00020021084	sb:cb81	99	70.277	ENSGAFG00000015700	sb:cb81	100	69.018	Gambusia_affinis
ENSORLG00020021084	sb:cb81	81	66.366	ENSGACG00000013400	sb:cb81	100	65.766	Gasterosteus_aculeatus
ENSORLG00020021084	sb:cb81	100	68.235	ENSHBUG00000002383	sb:cb81	100	69.176	Haplochromis_burtoni
ENSORLG00020021084	sb:cb81	64	44.906	ENSHCOG00000013932	zfp36l1a	68	41.667	Hippocampus_comes
ENSORLG00020021084	sb:cb81	72	40.532	ENSHCOG00000015800	zgc:114130	65	38.246	Hippocampus_comes
ENSORLG00020021084	sb:cb81	100	49.887	ENSHCOG00000000792	sb:cb81	79	63.492	Hippocampus_comes
ENSORLG00020021084	sb:cb81	100	52.010	ENSIPUG00000011378	sb:cb81	100	52.764	Ictalurus_punctatus
ENSORLG00020021084	sb:cb81	85	37.752	ENSIPUG00000018248	zgc:162730	57	41.176	Ictalurus_punctatus
ENSORLG00020021084	sb:cb81	99	37.626	ENSIPUG00000018256	zgc:114130	79	36.111	Ictalurus_punctatus
ENSORLG00020021084	sb:cb81	63	41.259	ENSKMAG00000019287	zgc:114130	62	40.071	Kryptolebias_marmoratus
ENSORLG00020021084	sb:cb81	80	42.105	ENSKMAG00000019277	zgc:162730	57	41.700	Kryptolebias_marmoratus
ENSORLG00020021084	sb:cb81	100	70.913	ENSKMAG00000009884	sb:cb81	100	69.712	Kryptolebias_marmoratus
ENSORLG00020021084	sb:cb81	100	60.739	ENSLBEG00000018376	sb:cb81	100	61.176	Labrus_bergylta
ENSORLG00020021084	sb:cb81	72	40.127	ENSLBEG00000018387	zgc:114130	66	39.661	Labrus_bergylta
ENSORLG00020021084	sb:cb81	70	39.752	ENSLBEG00000018380	zgc:162730	99	33.726	Labrus_bergylta
ENSORLG00020021084	sb:cb81	100	52.882	ENSLACG00000015732	sb:cb81	100	51.861	Latimeria_chalumnae
ENSORLG00020021084	sb:cb81	100	36.715	ENSLACG00000015967	ZFP36L1	63	39.147	Latimeria_chalumnae
ENSORLG00020021084	sb:cb81	95	40.609	ENSLACG00000015980	-	64	40.942	Latimeria_chalumnae
ENSORLG00020021084	sb:cb81	100	55.854	ENSLOCG00000014587	sb:cb81	100	55.172	Lepisosteus_oculatus
ENSORLG00020021084	sb:cb81	80	39.222	ENSLOCG00000014597	zgc:162730	82	36.283	Lepisosteus_oculatus
ENSORLG00020021084	sb:cb81	71	36.478	ENSMAMG00000007511	zgc:114130	63	37.282	Mastacembelus_armatus
ENSORLG00020021084	sb:cb81	100	66.200	ENSMAMG00000020144	sb:cb81	90	63.869	Mastacembelus_armatus
ENSORLG00020021084	sb:cb81	66	42.053	ENSMAMG00000007516	zgc:162730	51	41.778	Mastacembelus_armatus
ENSORLG00020021084	sb:cb81	100	70.238	ENSMZEG00005024684	sb:cb81	100	70.000	Maylandia_zebra
ENSORLG00020021084	sb:cb81	100	70.406	ENSMZEG00005016001	-	100	70.167	Maylandia_zebra
ENSORLG00020021084	sb:cb81	57	45.417	ENSMZEG00005014415	zgc:162730	59	42.500	Maylandia_zebra
ENSORLG00020021084	sb:cb81	98	39.206	ENSMAUG00000020087	Zfp36l1	60	43.210	Mesocricetus_auratus
ENSORLG00020021084	sb:cb81	98	39.454	ENSMOCG00000003189	Zfp36l1	60	43.621	Microtus_ochrogaster
ENSORLG00020021084	sb:cb81	100	60.453	ENSMMOG00000010073	sb:cb81	100	58.586	Mola_mola
ENSORLG00020021084	sb:cb81	57	40.417	ENSMMOG00000011506	zgc:162730	54	46.875	Mola_mola
ENSORLG00020021084	sb:cb81	63	58.039	ENSMALG00000021140	-	96	57.255	Monopterus_albus
ENSORLG00020021084	sb:cb81	66	42.034	ENSMALG00000002348	zgc:162730	99	34.943	Monopterus_albus
ENSORLG00020021084	sb:cb81	98	39.206	MGP_CAROLIEiJ_G0017893	Zfp36l1	60	43.210	Mus_caroli
ENSORLG00020021084	sb:cb81	98	39.206	ENSMUSG00000021127	Zfp36l1	60	43.210	Mus_musculus
ENSORLG00020021084	sb:cb81	98	39.206	MGP_PahariEiJ_G0029649	Zfp36l1	60	43.210	Mus_pahari
ENSORLG00020021084	sb:cb81	98	39.206	MGP_SPRETEiJ_G0018738	Zfp36l1	60	43.210	Mus_spretus
ENSORLG00020021084	sb:cb81	98	38.958	ENSNGAG00000024367	Zfp36l1	60	43.210	Nannospalax_galili
ENSORLG00020021084	sb:cb81	100	69.734	ENSNBRG00000006231	sb:cb81	100	69.976	Neolamprologus_brichardi
ENSORLG00020021084	sb:cb81	98	38.765	ENSMEUG00000003070	ZFP36L1	60	45.000	Notamacropus_eugenii
ENSORLG00020021084	sb:cb81	100	66.822	ENSONIG00000001259	sb:cb81	100	68.941	Oreochromis_niloticus
ENSORLG00020021084	sb:cb81	100	97.436	ENSORLG00000024026	sb:cb81	86	97.436	Oryzias_latipes
ENSORLG00020021084	sb:cb81	100	97.423	ENSORLG00015010105	sb:cb81	100	97.423	Oryzias_latipes_hsok
ENSORLG00020021084	sb:cb81	50	44.589	ENSOMEG00000017752	zgc:162730	52	42.273	Oryzias_melastigma
ENSORLG00020021084	sb:cb81	100	88.114	ENSOMEG00000020565	sb:cb81	100	87.597	Oryzias_melastigma
ENSORLG00020021084	sb:cb81	64	48.649	ENSPMGG00000009232	sb:cb81	80	44.223	Periophthalmus_magnuspinnatus
ENSORLG00020021084	sb:cb81	98	38.765	ENSPCIG00000019895	ZFP36L1	53	42.917	Phascolarctos_cinereus
ENSORLG00020021084	sb:cb81	100	70.854	ENSPFOG00000013806	sb:cb81	100	69.598	Poecilia_formosa
ENSORLG00020021084	sb:cb81	80	38.596	ENSPFOG00000003665	zgc:162730	94	43.321	Poecilia_formosa
ENSORLG00020021084	sb:cb81	92	68.956	ENSPLAG00000020158	sb:cb81	99	68.132	Poecilia_latipinna
ENSORLG00020021084	sb:cb81	100	70.854	ENSPMEG00000022425	sb:cb81	100	69.598	Poecilia_mexicana
ENSORLG00020021084	sb:cb81	51	44.298	ENSPMEG00000000341	zgc:162730	58	41.532	Poecilia_mexicana
ENSORLG00020021084	sb:cb81	51	43.290	ENSPREG00000021263	zgc:162730	58	41.129	Poecilia_reticulata
ENSORLG00020021084	sb:cb81	100	69.154	ENSPREG00000017495	sb:cb81	100	69.652	Poecilia_reticulata
ENSORLG00020021084	sb:cb81	65	45.769	ENSPREG00000013484	zfp36l1a	64	44.061	Poecilia_reticulata
ENSORLG00020021084	sb:cb81	64	45.276	ENSPNYG00000004953	zfp36l1a	62	42.745	Pundamilia_nyererei
ENSORLG00020021084	sb:cb81	100	69.880	ENSPNYG00000007502	sb:cb81	100	69.639	Pundamilia_nyererei
ENSORLG00020021084	sb:cb81	64	46.693	ENSPNAG00000000386	zfp36l1b	64	45.703	Pygocentrus_nattereri
ENSORLG00020021084	sb:cb81	100	58.250	ENSPNAG00000030063	sb:cb81	100	55.500	Pygocentrus_nattereri
ENSORLG00020021084	sb:cb81	72	39.333	ENSPNAG00000023029	zgc:114130	70	38.255	Pygocentrus_nattereri
ENSORLG00020021084	sb:cb81	63	44.094	ENSPNAG00000023018	zgc:162730	82	39.228	Pygocentrus_nattereri
ENSORLG00020021084	sb:cb81	98	38.765	ENSSHAG00000011647	ZFP36L1	60	45.000	Sarcophilus_harrisii
ENSORLG00020021084	sb:cb81	99	48.529	ENSSFOG00015003179	sb:cb81	99	46.929	Scleropages_formosus
ENSORLG00020021084	sb:cb81	100	37.531	ENSSFOG00015020649	ZFP36L1	100	36.029	Scleropages_formosus
ENSORLG00020021084	sb:cb81	55	64.474	ENSSMAG00000004403	sb:cb81	94	66.228	Scophthalmus_maximus
ENSORLG00020021084	sb:cb81	66	41.892	ENSSMAG00000018612	zgc:162730	69	38.033	Scophthalmus_maximus
ENSORLG00020021084	sb:cb81	100	68.578	ENSSDUG00000004426	sb:cb81	100	66.284	Seriola_dumerili
ENSORLG00020021084	sb:cb81	66	42.809	ENSSDUG00000002247	zgc:162730	99	37.811	Seriola_dumerili
ENSORLG00020021084	sb:cb81	66	42.475	ENSSLDG00000008502	zgc:162730	99	37.562	Seriola_lalandi_dorsalis
ENSORLG00020021084	sb:cb81	100	68.822	ENSSLDG00000018035	sb:cb81	100	66.513	Seriola_lalandi_dorsalis
ENSORLG00020021084	sb:cb81	71	37.152	ENSSLDG00000008496	zgc:114130	62	36.861	Seriola_lalandi_dorsalis
ENSORLG00020021084	sb:cb81	100	38.971	ENSSPUG00000002037	ZFP36L1	62	42.231	Sphenodon_punctatus
ENSORLG00020021084	sb:cb81	100	69.458	ENSSPAG00000013546	sb:cb81	100	68.069	Stegastes_partitus
ENSORLG00020021084	sb:cb81	68	39.073	ENSSPAG00000006856	zgc:114130	67	37.919	Stegastes_partitus
ENSORLG00020021084	sb:cb81	82	38.133	ENSSPAG00000006851	zgc:162730	57	41.434	Stegastes_partitus
ENSORLG00020021084	sb:cb81	100	65.122	ENSTRUG00000020720	sb:cb81	100	64.373	Takifugu_rubripes
ENSORLG00020021084	sb:cb81	66	41.581	ENSTRUG00000021229	zgc:162730	54	40.574	Takifugu_rubripes
ENSORLG00020021084	sb:cb81	66	40.559	ENSTNIG00000000183	zgc:162730	54	45.175	Tetraodon_nigroviridis
ENSORLG00020021084	sb:cb81	79	64.127	ENSTNIG00000019802	sb:cb81	94	61.859	Tetraodon_nigroviridis
ENSORLG00020021084	sb:cb81	67	45.149	ENSXCOG00000001799	zfp36l1a	64	43.494	Xiphophorus_couchianus
ENSORLG00020021084	sb:cb81	72	74.468	ENSXCOG00000010688	sb:cb81	98	74.468	Xiphophorus_couchianus
ENSORLG00020021084	sb:cb81	65	45.769	ENSXMAG00000022234	zfp36l1a	62	43.846	Xiphophorus_maculatus
ENSORLG00020021084	sb:cb81	100	69.598	ENSXMAG00000004681	sb:cb81	99	68.844	Xiphophorus_maculatus