EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020021345 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-217k17.7
Alias: -
Full Name: si:ch211-217k17.7
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 3214 bases
Position: chr1:14393016-14396229
Accession: ZDB-GENE-061009-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020020336	Cgr1	PF03879.14	1.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020029708	-	2235	-	ENSORLP00020020336	271 (aa)	-	-

Gene Model

Click here to download ENSORLG00020021345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020021345's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020021345	si:ch211-217k17.7	65	52.174	ENSG00000110104	CCDC86	87	64.444	Homo_sapiens
ENSORLG00020021345	si:ch211-217k17.7	100	57.912	ENSAPOG00000010968	si:ch211-217k17.7	99	60.811	Acanthochromis_polyacanthus
ENSORLG00020021345	si:ch211-217k17.7	96	57.447	ENSACIG00000020679	si:ch211-217k17.7	81	56.738	Amphilophus_citrinellus
ENSORLG00020021345	si:ch211-217k17.7	100	60.678	ENSAOCG00000006303	si:ch211-217k17.7	99	60.000	Amphiprion_ocellaris
ENSORLG00020021345	si:ch211-217k17.7	100	60.678	ENSAPEG00000015364	si:ch211-217k17.7	99	60.000	Amphiprion_percula
ENSORLG00020021345	si:ch211-217k17.7	96	62.082	ENSATEG00000016386	si:ch211-217k17.7	92	61.710	Anabas_testudineus
ENSORLG00020021345	si:ch211-217k17.7	58	67.722	ENSAMXG00000037666	si:ch211-217k17.7	52	84.071	Astyanax_mexicanus
ENSORLG00020021345	si:ch211-217k17.7	96	56.296	ENSCSEG00000002637	si:ch211-217k17.7	92	57.778	Cynoglossus_semilaevis
ENSORLG00020021345	si:ch211-217k17.7	96	58.273	ENSCVAG00000003135	si:ch211-217k17.7	92	57.554	Cyprinodon_variegatus
ENSORLG00020021345	si:ch211-217k17.7	85	55.967	ENSDARG00000059908	si:ch211-217k17.7	83	55.144	Danio_rerio
ENSORLG00020021345	si:ch211-217k17.7	85	54.682	ENSELUG00000022687	si:ch211-217k17.7	82	53.184	Esox_lucius
ENSORLG00020021345	si:ch211-217k17.7	85	53.036	ENSGMOG00000016242	-	82	51.883	Gadus_morhua
ENSORLG00020021345	si:ch211-217k17.7	96	58.484	ENSGAFG00000005681	si:ch211-217k17.7	92	58.845	Gambusia_affinis
ENSORLG00020021345	si:ch211-217k17.7	85	60.251	ENSGACG00000017630	si:ch211-217k17.7	98	60.581	Gasterosteus_aculeatus
ENSORLG00020021345	si:ch211-217k17.7	96	58.511	ENSHBUG00000010352	si:ch211-217k17.7	92	60.140	Haplochromis_burtoni
ENSORLG00020021345	si:ch211-217k17.7	100	60.544	ENSKMAG00000000919	si:ch211-217k17.7	98	61.356	Kryptolebias_marmoratus
ENSORLG00020021345	si:ch211-217k17.7	90	59.438	ENSLBEG00000020547	-	82	59.036	Labrus_bergylta
ENSORLG00020021345	si:ch211-217k17.7	99	58.562	ENSMAMG00000016395	si:ch211-217k17.7	96	57.877	Mastacembelus_armatus
ENSORLG00020021345	si:ch211-217k17.7	96	58.803	ENSMZEG00005019822	si:ch211-217k17.7	92	58.966	Maylandia_zebra
ENSORLG00020021345	si:ch211-217k17.7	96	61.624	ENSMMOG00000006446	si:ch211-217k17.7	91	61.255	Mola_mola
ENSORLG00020021345	si:ch211-217k17.7	96	55.762	ENSNBRG00000013330	-	75	88.889	Neolamprologus_brichardi
ENSORLG00020021345	si:ch211-217k17.7	96	61.314	ENSONIG00000017568	si:ch211-217k17.7	92	59.854	Oreochromis_niloticus
ENSORLG00020021345	si:ch211-217k17.7	71	46.479	ENSOCUG00000026432	CCDC86	69	45.498	Oryctolagus_cuniculus
ENSORLG00020021345	si:ch211-217k17.7	100	95.620	ENSORLG00000006331	-	100	95.620	Oryzias_latipes
ENSORLG00020021345	si:ch211-217k17.7	100	95.588	ENSORLG00015021538	si:ch211-217k17.7	100	95.588	Oryzias_latipes_hsok
ENSORLG00020021345	si:ch211-217k17.7	88	75.984	ENSOMEG00000007064	si:ch211-217k17.7	91	76.378	Oryzias_melastigma
ENSORLG00020021345	si:ch211-217k17.7	76	62.727	ENSPMGG00000023665	si:ch211-217k17.7	88	58.527	Periophthalmus_magnuspinnatus
ENSORLG00020021345	si:ch211-217k17.7	96	55.789	ENSPFOG00000011617	si:ch211-217k17.7	94	57.951	Poecilia_formosa
ENSORLG00020021345	si:ch211-217k17.7	96	55.789	ENSPLAG00000016122	si:ch211-217k17.7	94	57.951	Poecilia_latipinna
ENSORLG00020021345	si:ch211-217k17.7	96	56.537	ENSPMEG00000018535	si:ch211-217k17.7	92	56.890	Poecilia_mexicana
ENSORLG00020021345	si:ch211-217k17.7	96	56.890	ENSPREG00000005478	si:ch211-217k17.7	92	56.272	Poecilia_reticulata
ENSORLG00020021345	si:ch211-217k17.7	76	62.802	ENSSMAG00000007686	si:ch211-217k17.7	92	57.818	Scophthalmus_maximus
ENSORLG00020021345	si:ch211-217k17.7	93	61.654	ENSSDUG00000002689	si:ch211-217k17.7	95	60.526	Seriola_dumerili
ENSORLG00020021345	si:ch211-217k17.7	96	61.733	ENSSLDG00000016681	si:ch211-217k17.7	91	61.372	Seriola_lalandi_dorsalis
ENSORLG00020021345	si:ch211-217k17.7	100	58.163	ENSSPAG00000000367	si:ch211-217k17.7	98	61.224	Stegastes_partitus
ENSORLG00020021345	si:ch211-217k17.7	79	59.070	ENSTRUG00000024101	si:ch211-217k17.7	89	56.735	Takifugu_rubripes
ENSORLG00020021345	si:ch211-217k17.7	96	57.246	ENSXCOG00000011207	si:ch211-217k17.7	92	55.882	Xiphophorus_couchianus
ENSORLG00020021345	si:ch211-217k17.7	96	57.246	ENSXMAG00000005529	si:ch211-217k17.7	99	52.610	Xiphophorus_maculatus