EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020021478 (Gene tree)
Gene ID: -
Gene Symbol: aptx
Alias: -
Full Name: aprataxin
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 3371 bases
Position: chr1:14331703-14335073
Accession: ZDB-GENE-040628-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020034814	DcpS_C	PF11969.8	2.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020035630	-	1860	-	ENSORLP00020034814	333 (aa)	-	-

Gene Model

Click here to download ENSORLG00020021478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020021478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020021478	aptx	100	57.478	ENSG00000137074	APTX	99	57.478	Homo_sapiens
ENSORLG00020021478	aptx	100	77.177	ENSAPOG00000008785	aptx	100	77.177	Acanthochromis_polyacanthus
ENSORLG00020021478	aptx	100	57.895	ENSAMEG00000007648	APTX	96	57.895	Ailuropoda_melanoleuca
ENSORLG00020021478	aptx	100	72.673	ENSACIG00000002035	aptx	100	72.673	Amphilophus_citrinellus
ENSORLG00020021478	aptx	100	77.778	ENSAOCG00000000634	aptx	100	77.778	Amphiprion_ocellaris
ENSORLG00020021478	aptx	100	77.778	ENSAPEG00000017253	aptx	100	77.778	Amphiprion_percula
ENSORLG00020021478	aptx	100	78.979	ENSATEG00000017383	aptx	100	78.979	Anabas_testudineus
ENSORLG00020021478	aptx	90	54.688	ENSAPLG00000015645	APTX	100	54.688	Anas_platyrhynchos
ENSORLG00020021478	aptx	100	54.971	ENSACAG00000003581	APTX	95	55.556	Anolis_carolinensis
ENSORLG00020021478	aptx	100	56.609	ENSANAG00000030160	APTX	98	56.325	Aotus_nancymaae
ENSORLG00020021478	aptx	99	77.946	ENSACLG00000018887	aptx	100	77.946	Astatotilapia_calliptera
ENSORLG00020021478	aptx	99	65.396	ENSAMXG00000039899	aptx	99	65.396	Astyanax_mexicanus
ENSORLG00020021478	aptx	100	57.143	ENSBTAG00000013947	APTX	98	57.143	Bos_taurus
ENSORLG00020021478	aptx	100	56.897	ENSCJAG00000007940	APTX	99	56.897	Callithrix_jacchus
ENSORLG00020021478	aptx	100	57.771	ENSCAFG00000001812	APTX	99	57.771	Canis_familiaris
ENSORLG00020021478	aptx	100	57.771	ENSCAFG00020015598	APTX	99	57.771	Canis_lupus_dingo
ENSORLG00020021478	aptx	100	56.609	ENSCHIG00000012896	APTX	99	56.609	Capra_hircus
ENSORLG00020021478	aptx	100	55.620	ENSTSYG00000003041	APTX	99	55.620	Carlito_syrichta
ENSORLG00020021478	aptx	65	64.972	ENSCAPG00000013470	APTX	100	64.972	Cavia_aperea
ENSORLG00020021478	aptx	100	56.433	ENSCPOG00000005975	APTX	100	70.225	Cavia_porcellus
ENSORLG00020021478	aptx	100	56.034	ENSCCAG00000036783	APTX	99	56.034	Cebus_capucinus
ENSORLG00020021478	aptx	100	57.895	ENSCATG00000042639	APTX	96	57.895	Cercocebus_atys
ENSORLG00020021478	aptx	100	58.651	ENSCLAG00000012185	APTX	100	70.787	Chinchilla_lanigera
ENSORLG00020021478	aptx	100	57.602	ENSCSAG00000009885	APTX	96	57.602	Chlorocebus_sabaeus
ENSORLG00020021478	aptx	100	57.670	ENSCPBG00000023973	APTX	98	57.670	Chrysemys_picta_bellii
ENSORLG00020021478	aptx	97	39.669	ENSCING00000008741	-	94	39.669	Ciona_intestinalis
ENSORLG00020021478	aptx	98	37.709	ENSCSAVG00000008038	-	97	38.268	Ciona_savignyi
ENSORLG00020021478	aptx	100	56.034	ENSCANG00000037253	APTX	99	56.034	Colobus_angolensis_palliatus
ENSORLG00020021478	aptx	98	58.683	ENSCGRG00001000705	Aptx	98	71.429	Cricetulus_griseus_chok1gshd
ENSORLG00020021478	aptx	98	57.692	ENSCGRG00000014159	Aptx	98	71.429	Cricetulus_griseus_crigri
ENSORLG00020021478	aptx	99	71.601	ENSCSEG00000009549	aptx	99	71.601	Cynoglossus_semilaevis
ENSORLG00020021478	aptx	100	76.276	ENSCVAG00000011942	aptx	99	76.276	Cyprinodon_variegatus
ENSORLG00020021478	aptx	99	64.048	ENSDARG00000027143	aptx	99	64.653	Danio_rerio
ENSORLG00020021478	aptx	100	59.064	ENSDNOG00000018498	APTX	96	59.064	Dasypus_novemcinctus
ENSORLG00020021478	aptx	100	57.143	ENSDORG00000002139	Aptx	100	70.225	Dipodomys_ordii
ENSORLG00020021478	aptx	53	41.477	FBgn0038704	CG5316	87	44.262	Drosophila_melanogaster
ENSORLG00020021478	aptx	81	55.596	ENSETEG00000012459	APTX	78	56.338	Echinops_telfairi
ENSORLG00020021478	aptx	98	47.550	ENSEBUG00000013914	aptx	95	47.550	Eptatretus_burgeri
ENSORLG00020021478	aptx	99	56.637	ENSEASG00005004566	APTX	99	56.637	Equus_asinus_asinus
ENSORLG00020021478	aptx	99	57.101	ENSECAG00000012674	APTX	91	57.101	Equus_caballus
ENSORLG00020021478	aptx	84	56.314	ENSEEUG00000010693	APTX	95	57.239	Erinaceus_europaeus
ENSORLG00020021478	aptx	100	59.012	ENSFCAG00000008728	APTX	99	59.012	Felis_catus
ENSORLG00020021478	aptx	100	56.232	ENSFALG00000001230	APTX	100	56.232	Ficedula_albicollis
ENSORLG00020021478	aptx	100	58.754	ENSFDAG00000013752	APTX	100	69.663	Fukomys_damarensis
ENSORLG00020021478	aptx	82	70.833	ENSFHEG00000021328	aptx	73	70.833	Fundulus_heteroclitus
ENSORLG00020021478	aptx	99	68.563	ENSGMOG00000012505	aptx	99	68.563	Gadus_morhua
ENSORLG00020021478	aptx	100	56.000	ENSGALG00000001954	APTX	100	56.000	Gallus_gallus
ENSORLG00020021478	aptx	100	74.775	ENSGAFG00000005086	aptx	100	74.775	Gambusia_affinis
ENSORLG00020021478	aptx	99	75.227	ENSGACG00000017887	aptx	99	75.227	Gasterosteus_aculeatus
ENSORLG00020021478	aptx	100	57.102	ENSGAGG00000013230	APTX	100	57.102	Gopherus_agassizii
ENSORLG00020021478	aptx	85	59.044	ENSGGOG00000014232	APTX	95	56.184	Gorilla_gorilla
ENSORLG00020021478	aptx	99	77.946	ENSHBUG00000021058	aptx	100	77.946	Haplochromis_burtoni
ENSORLG00020021478	aptx	100	58.065	ENSHGLG00000015093	APTX	100	70.225	Heterocephalus_glaber_female
ENSORLG00020021478	aptx	100	58.065	ENSHGLG00100013482	APTX	100	70.225	Heterocephalus_glaber_male
ENSORLG00020021478	aptx	99	69.486	ENSHCOG00000018216	aptx	96	69.486	Hippocampus_comes
ENSORLG00020021478	aptx	99	63.018	ENSIPUG00000017548	aptx	99	63.018	Ictalurus_punctatus
ENSORLG00020021478	aptx	100	58.457	ENSSTOG00000005185	APTX	100	70.787	Ictidomys_tridecemlineatus
ENSORLG00020021478	aptx	100	55.255	ENSJJAG00000015653	Aptx	100	55.255	Jaculus_jaculus
ENSORLG00020021478	aptx	100	75.075	ENSKMAG00000000117	aptx	100	75.075	Kryptolebias_marmoratus
ENSORLG00020021478	aptx	99	73.547	ENSLBEG00000015353	aptx	99	73.547	Labrus_bergylta
ENSORLG00020021478	aptx	99	65.861	ENSLBEG00000021489	APTX	99	65.861	Labrus_bergylta
ENSORLG00020021478	aptx	100	57.983	ENSLACG00000003376	APTX	100	57.983	Latimeria_chalumnae
ENSORLG00020021478	aptx	100	62.931	ENSLOCG00000011556	aptx	96	62.931	Lepisosteus_oculatus
ENSORLG00020021478	aptx	100	57.895	ENSLAFG00000005665	APTX	99	57.895	Loxodonta_africana
ENSORLG00020021478	aptx	99	58.112	ENSMFAG00000043141	APTX	96	58.112	Macaca_fascicularis
ENSORLG00020021478	aptx	100	57.602	ENSMMUG00000007724	APTX	96	57.602	Macaca_mulatta
ENSORLG00020021478	aptx	100	57.018	ENSMNEG00000042341	APTX	99	57.018	Macaca_nemestrina
ENSORLG00020021478	aptx	100	57.895	ENSMLEG00000035137	APTX	99	57.895	Mandrillus_leucophaeus
ENSORLG00020021478	aptx	100	75.976	ENSMAMG00000018377	aptx	100	75.976	Mastacembelus_armatus
ENSORLG00020021478	aptx	99	77.644	ENSMZEG00005022621	aptx	100	77.644	Maylandia_zebra
ENSORLG00020021478	aptx	53	68.539	ENSMGAG00000005736	APTX	98	68.539	Meleagris_gallopavo
ENSORLG00020021478	aptx	98	58.982	ENSMAUG00000006039	Aptx	98	73.143	Mesocricetus_auratus
ENSORLG00020021478	aptx	100	58.187	ENSMICG00000006603	APTX	97	58.187	Microcebus_murinus
ENSORLG00020021478	aptx	99	58.209	ENSMOCG00000000869	Aptx	99	71.429	Microtus_ochrogaster
ENSORLG00020021478	aptx	99	75.375	ENSMMOG00000007028	aptx	99	75.375	Mola_mola
ENSORLG00020021478	aptx	99	55.908	ENSMODG00000003365	APTX	99	55.908	Monodelphis_domestica
ENSORLG00020021478	aptx	100	66.967	ENSMALG00000003828	aptx	100	66.967	Monopterus_albus
ENSORLG00020021478	aptx	81	70.857	MGP_CAROLIEiJ_G0025897	-	99	70.857	Mus_caroli
ENSORLG00020021478	aptx	99	56.395	ENSMUSG00000028411	Aptx	99	70.857	Mus_musculus
ENSORLG00020021478	aptx	99	58.333	MGP_PahariEiJ_G0024020	Aptx	99	58.333	Mus_pahari
ENSORLG00020021478	aptx	99	56.395	MGP_SPRETEiJ_G0026846	Aptx	96	56.395	Mus_spretus
ENSORLG00020021478	aptx	100	58.140	ENSMPUG00000004290	APTX	99	58.140	Mustela_putorius_furo
ENSORLG00020021478	aptx	100	57.593	ENSMLUG00000016081	APTX	95	57.593	Myotis_lucifugus
ENSORLG00020021478	aptx	100	58.284	ENSNGAG00000016314	Aptx	100	70.225	Nannospalax_galili
ENSORLG00020021478	aptx	99	77.341	ENSNBRG00000014199	aptx	100	77.341	Neolamprologus_brichardi
ENSORLG00020021478	aptx	100	57.471	ENSNLEG00000032184	APTX	99	57.471	Nomascus_leucogenys
ENSORLG00020021478	aptx	98	54.118	ENSMEUG00000004153	APTX	98	54.118	Notamacropus_eugenii
ENSORLG00020021478	aptx	85	56.803	ENSOPRG00000012403	APTX	95	56.803	Ochotona_princeps
ENSORLG00020021478	aptx	100	57.658	ENSODEG00000015832	-	100	69.101	Octodon_degus
ENSORLG00020021478	aptx	77	65.128	ENSODEG00000000097	-	100	50.450	Octodon_degus
ENSORLG00020021478	aptx	100	77.477	ENSONIG00000014541	aptx	83	77.477	Oreochromis_niloticus
ENSORLG00020021478	aptx	86	56.129	ENSOANG00000009878	APTX	100	56.129	Ornithorhynchus_anatinus
ENSORLG00020021478	aptx	81	71.186	ENSOCUG00000025059	-	92	71.186	Oryctolagus_cuniculus
ENSORLG00020021478	aptx	99	58.235	ENSOCUG00000000738	-	98	58.276	Oryctolagus_cuniculus
ENSORLG00020021478	aptx	100	97.898	ENSORLG00000006237	aptx	100	97.898	Oryzias_latipes
ENSORLG00020021478	aptx	100	94.362	ENSORLG00015021873	aptx	100	94.362	Oryzias_latipes_hsok
ENSORLG00020021478	aptx	87	87.931	ENSOMEG00000007875	aptx	81	87.931	Oryzias_melastigma
ENSORLG00020021478	aptx	100	56.305	ENSOGAG00000005388	APTX	96	56.305	Otolemur_garnettii
ENSORLG00020021478	aptx	100	56.897	ENSOARG00000009598	APTX	96	56.897	Ovis_aries
ENSORLG00020021478	aptx	100	57.185	ENSPPAG00000030295	APTX	96	57.185	Pan_paniscus
ENSORLG00020021478	aptx	100	59.012	ENSPPRG00000017524	APTX	99	59.012	Panthera_pardus
ENSORLG00020021478	aptx	100	59.012	ENSPTIG00000020000	APTX	99	59.012	Panthera_tigris_altaica
ENSORLG00020021478	aptx	100	57.185	ENSPTRG00000020850	APTX	99	57.185	Pan_troglodytes
ENSORLG00020021478	aptx	100	57.602	ENSPANG00000025301	APTX	96	57.602	Papio_anubis
ENSORLG00020021478	aptx	100	65.714	ENSPKIG00000013601	aptx	100	65.714	Paramormyrops_kingsleyae
ENSORLG00020021478	aptx	100	59.064	ENSPSIG00000010521	APTX	95	59.064	Pelodiscus_sinensis
ENSORLG00020021478	aptx	98	67.742	ENSPMGG00000018649	aptx	99	67.742	Periophthalmus_magnuspinnatus
ENSORLG00020021478	aptx	99	59.226	ENSPEMG00000007747	Aptx	99	72.000	Peromyscus_maniculatus_bairdii
ENSORLG00020021478	aptx	99	49.288	ENSPMAG00000008417	aptx	97	49.288	Petromyzon_marinus
ENSORLG00020021478	aptx	100	57.835	ENSPCIG00000029852	APTX	100	57.835	Phascolarctos_cinereus
ENSORLG00020021478	aptx	100	75.676	ENSPFOG00000004992	aptx	100	75.676	Poecilia_formosa
ENSORLG00020021478	aptx	100	75.976	ENSPFOG00000005131	-	99	75.976	Poecilia_formosa
ENSORLG00020021478	aptx	100	75.976	ENSPLAG00000007960	APTX	100	75.976	Poecilia_latipinna
ENSORLG00020021478	aptx	100	75.976	ENSPLAG00000007906	aptx	100	75.976	Poecilia_latipinna
ENSORLG00020021478	aptx	100	75.676	ENSPMEG00000019789	APTX	100	75.676	Poecilia_mexicana
ENSORLG00020021478	aptx	100	75.976	ENSPMEG00000018504	aptx	100	75.976	Poecilia_mexicana
ENSORLG00020021478	aptx	100	70.871	ENSPREG00000004375	aptx	100	70.871	Poecilia_reticulata
ENSORLG00020021478	aptx	100	57.471	ENSPPYG00000019142	APTX	96	57.471	Pongo_abelii
ENSORLG00020021478	aptx	100	48.387	ENSPCAG00000010014	APTX	99	48.387	Procavia_capensis
ENSORLG00020021478	aptx	100	56.897	ENSPCOG00000016780	APTX	99	56.897	Propithecus_coquereli
ENSORLG00020021478	aptx	100	57.143	ENSPVAG00000011468	APTX	96	57.143	Pteropus_vampyrus
ENSORLG00020021478	aptx	99	77.946	ENSPNYG00000007675	aptx	100	77.946	Pundamilia_nyererei
ENSORLG00020021478	aptx	99	63.768	ENSPNAG00000015984	aptx	99	63.768	Pygocentrus_nattereri
ENSORLG00020021478	aptx	99	57.958	ENSRNOG00000006582	Aptx	99	57.958	Rattus_norvegicus
ENSORLG00020021478	aptx	100	57.184	ENSRBIG00000042913	APTX	99	57.184	Rhinopithecus_bieti
ENSORLG00020021478	aptx	100	57.602	ENSRROG00000035395	APTX	99	57.602	Rhinopithecus_roxellana
ENSORLG00020021478	aptx	100	56.322	ENSSBOG00000025215	APTX	99	56.322	Saimiri_boliviensis_boliviensis
ENSORLG00020021478	aptx	99	58.309	ENSSHAG00000012205	APTX	94	58.309	Sarcophilus_harrisii
ENSORLG00020021478	aptx	100	65.537	ENSSFOG00015009267	aptx	100	65.537	Scleropages_formosus
ENSORLG00020021478	aptx	100	76.877	ENSSMAG00000008839	aptx	100	76.877	Scophthalmus_maximus
ENSORLG00020021478	aptx	100	77.177	ENSSDUG00000001989	aptx	100	77.177	Seriola_dumerili
ENSORLG00020021478	aptx	100	77.177	ENSSLDG00000004915	aptx	100	77.177	Seriola_lalandi_dorsalis
ENSORLG00020021478	aptx	100	56.818	ENSSPUG00000008994	APTX	86	56.818	Sphenodon_punctatus
ENSORLG00020021478	aptx	100	76.877	ENSSPAG00000020373	aptx	100	76.877	Stegastes_partitus
ENSORLG00020021478	aptx	99	57.726	ENSSSCG00000011001	APTX	99	57.726	Sus_scrofa
ENSORLG00020021478	aptx	100	57.059	ENSTGUG00000001441	APTX	99	57.059	Taeniopygia_guttata
ENSORLG00020021478	aptx	99	73.112	ENSTRUG00000009794	aptx	99	73.112	Takifugu_rubripes
ENSORLG00020021478	aptx	99	72.810	ENSTNIG00000010570	aptx	99	72.810	Tetraodon_nigroviridis
ENSORLG00020021478	aptx	100	53.936	ENSTBEG00000008504	APTX	96	53.936	Tupaia_belangeri
ENSORLG00020021478	aptx	93	53.145	ENSTTRG00000007384	APTX	95	53.145	Tursiops_truncatus
ENSORLG00020021478	aptx	99	57.817	ENSUAMG00000003700	APTX	97	57.817	Ursus_americanus
ENSORLG00020021478	aptx	99	57.817	ENSUMAG00000005837	APTX	99	57.817	Ursus_maritimus
ENSORLG00020021478	aptx	71	62.791	ENSVPAG00000001297	APTX	68	62.791	Vicugna_pacos
ENSORLG00020021478	aptx	100	57.771	ENSVVUG00000021130	APTX	99	57.771	Vulpes_vulpes
ENSORLG00020021478	aptx	99	55.233	ENSXETG00000024143	aptx	99	56.571	Xenopus_tropicalis
ENSORLG00020021478	aptx	100	71.225	ENSXCOG00000005020	aptx	100	71.225	Xiphophorus_couchianus
ENSORLG00020021478	aptx	100	75.676	ENSXMAG00000022086	aptx	97	75.676	Xiphophorus_maculatus