EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020021663 (Gene tree)
Gene ID: -
Gene Symbol: rab3db
Alias: -
Full Name: RAB3D%2C member RAS oncogene family%2C b
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 10498 bases
Position: chr8:21156268-21166765
Accession: ZDB-GENE-040718-428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020034944	GTP_EFTU	PF00009.27	2.1e-06	1	1
ENSORLP00020034944	MMR_HSR1	PF01926.23	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020030113	-	3181	-	ENSORLP00020034944	220 (aa)	-	-

Gene Model

Click here to download ENSORLG00020021663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020021663's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020021663	rab3db	77	43.860	ENSORLG00020008333	rab18a	80	45.122
ENSORLG00020021663	rab3db	76	48.810	ENSORLG00020009535	-	84	48.810
ENSORLG00020021663	rab3db	76	42.262	ENSORLG00020015288	rab30	81	42.262
ENSORLG00020021663	rab3db	74	31.176	ENSORLG00020006790	dnajc27	63	31.176
ENSORLG00020021663	rab3db	91	44.776	ENSORLG00020021697	-	92	46.486
ENSORLG00020021663	rab3db	79	43.678	ENSORLG00020004905	RAB15	84	43.678
ENSORLG00020021663	rab3db	74	30.909	ENSORLG00020010041	rab34a	62	30.909
ENSORLG00020021663	rab3db	93	37.209	ENSORLG00020018986	rab14	83	39.572
ENSORLG00020021663	rab3db	71	37.736	ENSORLG00020018196	rab33ba	68	37.736
ENSORLG00020021663	rab3db	75	38.788	ENSORLG00020008388	rab5c	86	36.364
ENSORLG00020021663	rab3db	92	41.827	ENSORLG00020011590	rab18b	83	46.199
ENSORLG00020021663	rab3db	68	36.774	ENSORLG00020013870	-	64	36.774
ENSORLG00020021663	rab3db	71	32.704	ENSORLG00020005258	rerg	79	32.704
ENSORLG00020021663	rab3db	71	33.537	ENSORLG00020010114	-	85	33.537
ENSORLG00020021663	rab3db	72	32.515	ENSORLG00020000483	rab9a	81	32.515
ENSORLG00020021663	rab3db	76	43.103	ENSORLG00020015717	-	71	43.103
ENSORLG00020021663	rab3db	70	42.208	ENSORLG00020020922	rab5aa	71	42.208
ENSORLG00020021663	rab3db	73	34.337	ENSORLG00020009158	rab9b	79	34.337
ENSORLG00020021663	rab3db	72	39.024	ENSORLG00020020266	rab33a	59	39.024
ENSORLG00020021663	rab3db	75	47.929	ENSORLG00020000867	si:dkey-16l2.16	77	48.765
ENSORLG00020021663	rab3db	72	32.704	ENSORLG00020008129	hras	83	32.704
ENSORLG00020021663	rab3db	91	44.059	ENSORLG00020000892	rab1ab	86	46.821
ENSORLG00020021663	rab3db	75	43.713	ENSORLG00020019269	RAB39B	78	43.713
ENSORLG00020021663	rab3db	89	40.306	ENSORLG00020001816	rab6a	85	43.529
ENSORLG00020021663	rab3db	92	37.788	ENSORLG00020013895	rab42a	80	41.714
ENSORLG00020021663	rab3db	90	39.524	ENSORLG00020018259	rab15	77	45.455
ENSORLG00020021663	rab3db	91	35.577	ENSORLG00020013747	rab11al	84	37.363
ENSORLG00020021663	rab3db	78	36.364	ENSORLG00020019465	si:dkey-13a21.4	84	36.416
ENSORLG00020021663	rab3db	74	39.053	ENSORLG00020005240	RAB29	82	39.053
ENSORLG00020021663	rab3db	53	39.831	ENSORLG00020011620	rras2	68	39.831
ENSORLG00020021663	rab3db	76	38.690	ENSORLG00020019393	rab11bb	77	38.690
ENSORLG00020021663	rab3db	71	32.278	ENSORLG00020002801	rheb	91	31.953
ENSORLG00020021663	rab3db	71	43.949	ENSORLG00020000604	rab41	74	42.038
ENSORLG00020021663	rab3db	74	36.527	ENSORLG00020008512	-	83	35.329
ENSORLG00020021663	rab3db	78	34.104	ENSORLG00020005150	rhebl1	91	34.104
ENSORLG00020021663	rab3db	87	41.885	ENSORLG00020021071	zgc:171927	86	42.473
ENSORLG00020021663	rab3db	78	40.462	ENSORLG00020013719	rab25b	84	40.606
ENSORLG00020021663	rab3db	90	39.234	ENSORLG00020020035	rab2a	89	39.683
ENSORLG00020021663	rab3db	77	38.824	ENSORLG00020020816	rab11ba	78	38.824
ENSORLG00020021663	rab3db	77	39.645	ENSORLG00020020811	rab25a	56	39.645
ENSORLG00020021663	rab3db	92	47.291	ENSORLG00020005131	rab12	75	50.532
ENSORLG00020021663	rab3db	73	41.718	ENSORLG00020020277	si:dkey-34d22.5	74	41.718
ENSORLG00020021663	rab3db	89	37.255	ENSORLG00020010772	rab6ba	76	42.683
ENSORLG00020021663	rab3db	72	32.704	ENSORLG00020020961	kras	89	32.704
ENSORLG00020021663	rab3db	72	36.420	ENSORLG00020005952	rab7a	78	36.420
ENSORLG00020021663	rab3db	73	33.951	ENSORLG00020013690	zgc:55558	84	33.962
ENSORLG00020021663	rab3db	69	38.961	ENSORLG00020012685	zgc:101559	66	38.961
ENSORLG00020021663	rab3db	70	30.128	ENSORLG00020016139	rab34b	57	30.128
ENSORLG00020021663	rab3db	76	38.690	ENSORLG00020020844	RAB11B	77	38.690
ENSORLG00020021663	rab3db	89	39.487	ENSORLG00020013337	rab6bb	79	43.949
ENSORLG00020021663	rab3db	83	32.787	ENSORLG00020020220	rab23	89	33.696
ENSORLG00020021663	rab3db	75	31.138	ENSORLG00020012306	si:ch73-116o1.2	80	31.138

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020021663	rab3db	94	71.905	ENSACAG00000016810	RAB3D	92	71.905	Anolis_carolinensis
ENSORLG00020021663	rab3db	73	76.398	ENSDARG00000018107	rab3da	96	76.398	Danio_rerio
ENSORLG00020021663	rab3db	93	70.048	ENSHCOG00000017123	-	88	73.016	Hippocampus_comes
ENSORLG00020021663	rab3db	93	69.565	ENSKMAG00000018973	-	94	69.082	Kryptolebias_marmoratus
ENSORLG00020021663	rab3db	94	65.238	ENSOCUG00000025381	RAB3D	82	71.667	Oryctolagus_cuniculus
ENSORLG00020021663	rab3db	100	99.545	ENSORLG00000016555	rab3db	99	99.545	Oryzias_latipes
ENSORLG00020021663	rab3db	100	99.091	ENSORLG00015014594	rab3db	100	99.091	Oryzias_latipes_hsok
ENSORLG00020021663	rab3db	96	74.648	ENSPKIG00000009021	rab3db	85	79.144	Paramormyrops_kingsleyae
ENSORLG00020021663	rab3db	93	70.048	ENSPCIG00000017722	RAB3D	95	70.048	Phascolarctos_cinereus
ENSORLG00020021663	rab3db	99	67.556	ENSSHAG00000007153	RAB3D	99	65.778	Sarcophilus_harrisii